RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KRT27Q7Z3Y8 459 aa31.74■■■□□ 2.67
COL9A2-201ENST00000372736 CDCA8Q53HL2 280 aa31.72■■■□□ 2.67
COL9A2-201ENST00000372736 LTN1O94822 1766 aa31.71■■■□□ 2.67
COL9A2-201ENST00000372736 CRB1P82279 1406 aa31.7■■■□□ 2.67
COL9A2-201ENST00000372736 USP35Q9P2H5 1018 aa31.7■■■□□ 2.67
COL9A2-201ENST00000372736 AXIN2Q9Y2T1 843 aa31.7■■■□□ 2.67
COL9A2-201ENST00000372736 BARGINQ6ZT62 677 aa31.69■■■□□ 2.66
COL9A2-201ENST00000372736 BLMP54132 1417 aaPredicted RBP31.67■■■□□ 2.66
COL9A2-201ENST00000372736 TCP11L2Q8N4U5 519 aa31.67■■■□□ 2.66
COL9A2-201ENST00000372736 WNK3Q9BYP7 1800 aa31.65■■■□□ 2.66
COL9A2-201ENST00000372736 CCDC125Q86Z20 511 aa31.65■■■□□ 2.66
COL9A2-201ENST00000372736 PARP4Q9UKK3 1724 aaKnown RBP31.65■■■□□ 2.66
COL9A2-201ENST00000372736 THRAP3Q9Y2W1 955 aaKnown RBP31.63■■■□□ 2.65
COL9A2-201ENST00000372736 WDR17Q8IZU2 1322 aa31.63■■■□□ 2.65
COL9A2-201ENST00000372736 HSPA5P11021 654 aaKnown RBP31.62■■■□□ 2.65
COL9A2-201ENST00000372736 EIF4G2P78344 907 aaKnown RBP eCLIP31.62■■■□□ 2.65
COL9A2-201ENST00000372736 KIF20BQ96Q89 1820 aa31.61■■■□□ 2.65
COL9A2-201ENST00000372736 LRRC37A3O60309 1634 aa31.59■■■□□ 2.65
COL9A2-201ENST00000372736 FAM182BQ5T319 152 aa31.58■■■□□ 2.65
COL9A2-201ENST00000372736 TOM1L2Q6ZVM7 507 aa31.58■■■□□ 2.65
COL9A2-201ENST00000372736 RGPD1P0DJD0 1748 aa31.56■■■□□ 2.64
COL9A2-201ENST00000372736 COG3Q96JB2 828 aa31.56■■■□□ 2.64
COL9A2-201ENST00000372736 TNS1Q9HBL0 1735 aaKnown RBP31.54■■■□□ 2.64
COL9A2-201ENST00000372736 NSD3Q9BZ95 1437 aa31.53■■■□□ 2.64
COL9A2-201ENST00000372736 FYB1O15117 783 aa31.53■■■□□ 2.64
COL9A2-201ENST00000372736 ERBB3P21860 1342 aa31.52■■■□□ 2.64
COL9A2-201ENST00000372736 CSB-PGBD3P0DP91 1061 aa31.52■■■□□ 2.64
COL9A2-201ENST00000372736 CARD14Q9BXL6 1004 aa31.52■■■□□ 2.64
COL9A2-201ENST00000372736 CARD10Q9BWT7 1032 aa31.51■■■□□ 2.63
COL9A2-201ENST00000372736 DISP2A7MBM2 1401 aa31.5■■■□□ 2.63
COL9A2-201ENST00000372736 GGNBP2Q9H3C7 697 aa31.5■■■□□ 2.63
COL9A2-201ENST00000372736 PDE3BQ13370 1112 aa31.48■■■□□ 2.63
COL9A2-201ENST00000372736 SF3B2Q13435 895 aaKnown RBP31.48■■■□□ 2.63
COL9A2-201ENST00000372736 DEFB132Q7Z7B7 95 aa31.48■■■□□ 2.63
COL9A2-201ENST00000372736 PEAK1Q9H792 1746 aa31.48■■■□□ 2.63
COL9A2-201ENST00000372736 CCDC7Q96M83 1385 aa31.47■■■□□ 2.63
COL9A2-201ENST00000372736 FAM208AQ9UK61 1670 aaKnown RBP31.47■■■□□ 2.63
COL9A2-201ENST00000372736 MAP3K19Q56UN5 1328 aa31.47■■■□□ 2.63
COL9A2-201ENST00000372736 FAM196AQ6ZSG2 479 aa31.46■■■□□ 2.63
COL9A2-201ENST00000372736 FBLN1P23142 703 aa31.45■■■□□ 2.63
COL9A2-201ENST00000372736 IP6K1Q92551 441 aa31.45■■■□□ 2.63
COL9A2-201ENST00000372736 POLR3GLQ9BT43 218 aa31.45■■■□□ 2.63
COL9A2-201ENST00000372736 ANKRD24Q8TF21 1146 aa31.44■■■□□ 2.62
COL9A2-201ENST00000372736 CDCA7Q9BWT1 371 aaPredicted RBP31.43■■■□□ 2.62
COL9A2-201ENST00000372736 RTL1A6NKG5 1358 aa31.43■■■□□ 2.62
COL9A2-201ENST00000372736 DDB1Q16531 1140 aa31.41■■■□□ 2.62
COL9A2-201ENST00000372736 OVOS2A0A0G2JMS6 1433 aa31.41■■■□□ 2.62
COL9A2-201ENST00000372736 C11orf95C9JLR9 678 aaPredicted RBP31.4■■■□□ 2.62
COL9A2-201ENST00000372736 HOXC9P31274 260 aa31.4■■■□□ 2.62
COL9A2-201ENST00000372736 NLRP2Q9NX02 1062 aa31.4■■■□□ 2.62
COL9A2-201ENST00000372736 BAG6P46379 1132 aa31.39■■■□□ 2.62
COL9A2-201ENST00000372736 RRS1Q15050 365 aaKnown RBP31.39■■■□□ 2.62
COL9A2-201ENST00000372736 TRIM37O94972 964 aa31.38■■■□□ 2.61
COL9A2-201ENST00000372736 TNS2Q63HR2 1409 aa31.38■■■□□ 2.61
COL9A2-201ENST00000372736 ANKRD26Q9UPS8 1709 aa31.38■■■□□ 2.61
COL9A2-201ENST00000372736 AMPHP49418 695 aa31.37■■■□□ 2.61
COL9A2-201ENST00000372736 SBF2Q86WG5 1849 aa31.37■■■□□ 2.61
COL9A2-201ENST00000372736 RGPD2P0DJD1 1756 aa31.36■■■□□ 2.61
COL9A2-201ENST00000372736 CGNL1Q0VF96 1302 aa31.36■■■□□ 2.61
COL9A2-201ENST00000372736 LTV1Q96GA3 475 aaPredicted RBP31.34■■■□□ 2.61
COL9A2-201ENST00000372736 EN1Q05925 392 aaPredicted RBP31.32■■■□□ 2.6
COL9A2-201ENST00000372736 MARCH10Q8NA82 808 aaPredicted RBP31.32■■■□□ 2.6
COL9A2-201ENST00000372736 BCL9O00512 1426 aa31.32■■■□□ 2.6
COL9A2-201ENST00000372736 KIF24Q5T7B8 1368 aa31.3■■■□□ 2.6
COL9A2-201ENST00000372736 IL2RBP14784 551 aa31.3■■■□□ 2.6
COL9A2-201ENST00000372736 PANK3Q9H999 370 aa31.3■■■□□ 2.6
COL9A2-201ENST00000372736 FLT4P35916 1363 aa31.3■■■□□ 2.6
COL9A2-201ENST00000372736 KIF7Q2M1P5 1343 aa31.28■■■□□ 2.6
COL9A2-201ENST00000372736 EXOC5O00471 708 aa31.27■■■□□ 2.6
COL9A2-201ENST00000372736 RREB1Q92766 1687 aa31.27■■■□□ 2.6
COL9A2-201ENST00000372736 INSRP06213 1382 aa31.27■■■□□ 2.6
COL9A2-201ENST00000372736 MAP2P11137 1827 aaKnown RBP31.26■■■□□ 2.59
COL9A2-201ENST00000372736 APBA3O96018 575 aa31.25■■■□□ 2.59
COL9A2-201ENST00000372736 EMILIN1Q9Y6C2 1016 aa31.25■■■□□ 2.59
COL9A2-201ENST00000372736 SMG6Q86US8 1419 aaKnown RBP31.24■■■□□ 2.59
COL9A2-201ENST00000372736 CAMKK2Q96RR4 588 aa31.24■■■□□ 2.59
COL9A2-201ENST00000372736 PARD3Q8TEW0 1356 aa31.24■■■□□ 2.59
COL9A2-201ENST00000372736 RGPD3A6NKT7 1758 aaPredicted RBP31.23■■■□□ 2.59
COL9A2-201ENST00000372736 RGPD4Q7Z3J3 1758 aa31.23■■■□□ 2.59
COL9A2-201ENST00000372736 EZH2Q15910 746 aaKnown RBP31.23■■■□□ 2.59
COL9A2-201ENST00000372736 HSP90AB2PQ58FF8 381 aa31.23■■■□□ 2.59
COL9A2-201ENST00000372736 NSD2O96028 1365 aa31.21■■■□□ 2.59
COL9A2-201ENST00000372736 MEGF6O75095 1541 aa31.21■■■□□ 2.59
COL9A2-201ENST00000372736 NUP188Q5SRE5 1749 aa31.21■■■□□ 2.59
COL9A2-201ENST00000372736 SHANK3Q9BYB0 1731 aa31.21■■■□□ 2.59
COL9A2-201ENST00000372736 NHSQ6T4R5 1651 aa31.2■■■□□ 2.59
COL9A2-201ENST00000372736 NBPF6Q5VWK0 638 aa31.19■■■□□ 2.58
COL9A2-201ENST00000372736 NBPF4Q96M43 638 aa31.19■■■□□ 2.58
COL9A2-201ENST00000372736 PTF1AQ7RTS3 328 aa31.18■■■□□ 2.58
COL9A2-201ENST00000372736 BCL11BQ9C0K0 894 aaPredicted RBP31.17■■■□□ 2.58
COL9A2-201ENST00000372736 USHBP1Q8N6Y0 703 aa31.15■■■□□ 2.58
COL9A2-201ENST00000372736 POLKQ9UBT6 870 aa31.15■■■□□ 2.58
COL9A2-201ENST00000372736 SRCAPQ6ZRS2 3230 aa31.13■■■□□ 2.57
COL9A2-201ENST00000372736 PPM1GO15355 546 aaPredicted RBP31.13■■■□□ 2.57
COL9A2-201ENST00000372736 TNNT2P45379 298 aaPredicted RBP31.13■■■□□ 2.57
COL9A2-201ENST00000372736 WASHC2AQ641Q2 1341 aa31.13■■■□□ 2.57
COL9A2-201ENST00000372736 NCAPD2Q15021 1401 aa31.12■■■□□ 2.57
COL9A2-201ENST00000372736 KNSTRNQ9Y448 316 aa31.11■■■□□ 2.57
COL9A2-201ENST00000372736 PLSCR1O15162 318 aa31.08■■■□□ 2.57
COL9A2-201ENST00000372736 PSDA5PKW4 1024 aaPredicted RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms