RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 BLMP54132 1417 aaPredicted RBP21.24■□□□□ 0.99
TMEM53-204ENST00000372243 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
TMEM53-204ENST00000372243 DIAPH1O60610 1272 aaKnown RBP21.23■□□□□ 0.99
TMEM53-204ENST00000372243 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
TMEM53-204ENST00000372243 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
TMEM53-204ENST00000372243 LMO7Q8WWI1 1683 aa21.22■□□□□ 0.99
TMEM53-204ENST00000372243 ZBTB7CA1YPR0 619 aa21.2■□□□□ 0.98
TMEM53-204ENST00000372243 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
TMEM53-204ENST00000372243 COL14A1Q05707 1796 aaKnown RBP21.2■□□□□ 0.98
TMEM53-204ENST00000372243 IL13P35225 146 aa21.19■□□□□ 0.98
TMEM53-204ENST00000372243 EIF4A2Q14240 407 aaKnown RBP21.19■□□□□ 0.98
TMEM53-204ENST00000372243 AXIN2Q9Y2T1 843 aa21.19■□□□□ 0.98
TMEM53-204ENST00000372243 RGPD5Q99666 1765 aa21.18■□□□□ 0.98
TMEM53-204ENST00000372243 WDR43Q15061 677 aaKnown RBP eCLIP21.18■□□□□ 0.98
TMEM53-204ENST00000372243 FAM83GA6ND36 823 aa21.17■□□□□ 0.98
TMEM53-204ENST00000372243 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
TMEM53-204ENST00000372243 RGPD1P0DJD0 1748 aa21.16■□□□□ 0.98
TMEM53-204ENST00000372243 CAMTA1Q9Y6Y1 1673 aa21.16■□□□□ 0.98
TMEM53-204ENST00000372243 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
TMEM53-204ENST00000372243 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
TMEM53-204ENST00000372243 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
TMEM53-204ENST00000372243 ERBB3P21860 1342 aa21.15■□□□□ 0.98
TMEM53-204ENST00000372243 FAM208AQ9UK61 1670 aaKnown RBP21.14■□□□□ 0.98
TMEM53-204ENST00000372243 FAM9BQ8IZU0 186 aa21.14■□□□□ 0.97
TMEM53-204ENST00000372243 ANKRD24Q8TF21 1146 aa21.14■□□□□ 0.97
TMEM53-204ENST00000372243 LRP6O75581 1613 aa21.13■□□□□ 0.97
TMEM53-204ENST00000372243 ADAMTS2O95450 1211 aa21.13■□□□□ 0.97
TMEM53-204ENST00000372243 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
TMEM53-204ENST00000372243 COL5A2P05997 1499 aaPredicted RBP21.13■□□□□ 0.97
TMEM53-204ENST00000372243 PLCH1Q4KWH8 1693 aa21.12■□□□□ 0.97
TMEM53-204ENST00000372243 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
TMEM53-204ENST00000372243 IGSF1Q8N6C5 1336 aa21.12■□□□□ 0.97
TMEM53-204ENST00000372243 NWD2Q9ULI1 1742 aa21.12■□□□□ 0.97
TMEM53-204ENST00000372243 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-204ENST00000372243 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
TMEM53-204ENST00000372243 LTV1Q96GA3 475 aaPredicted RBP21.1■□□□□ 0.97
TMEM53-204ENST00000372243 SLIT2O94813 1529 aa21.1■□□□□ 0.97
TMEM53-204ENST00000372243 EYA1Q99502 592 aa21.1■□□□□ 0.97
TMEM53-204ENST00000372243 BTG4Q9NY30 223 aa21.1■□□□□ 0.97
TMEM53-204ENST00000372243 NCAPD2Q15021 1401 aa21.09■□□□□ 0.97
TMEM53-204ENST00000372243 FCHSD2O94868 740 aa21.09■□□□□ 0.97
TMEM53-204ENST00000372243 WDR17Q8IZU2 1322 aa21.09■□□□□ 0.97
TMEM53-204ENST00000372243 KDRP35968 1356 aa21.09■□□□□ 0.97
TMEM53-204ENST00000372243 NRAPQ86VF7 1730 aa21.07■□□□□ 0.96
TMEM53-204ENST00000372243 RGPD2P0DJD1 1756 aa21.07■□□□□ 0.96
TMEM53-204ENST00000372243 NBPF6Q5VWK0 638 aa21.07■□□□□ 0.96
TMEM53-204ENST00000372243 NBPF4Q96M43 638 aa21.07■□□□□ 0.96
TMEM53-204ENST00000372243 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
TMEM53-204ENST00000372243 CSB-PGBD3P0DP91 1061 aa21.06■□□□□ 0.96
TMEM53-204ENST00000372243 EVA1CP58658 441 aa21.06■□□□□ 0.96
TMEM53-204ENST00000372243 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-204ENST00000372243 SULT6B1Q6IMI4 303 aa21.05■□□□□ 0.96
TMEM53-204ENST00000372243 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
TMEM53-204ENST00000372243 NGLY1Q96IV0 654 aa21.04■□□□□ 0.96
TMEM53-204ENST00000372243 C8orf37Q96NL8 207 aa21.04■□□□□ 0.96
TMEM53-204ENST00000372243 CRB1P82279 1406 aa21.03■□□□□ 0.96
TMEM53-204ENST00000372243 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.03■□□□□ 0.96
TMEM53-204ENST00000372243 HMOX1P09601 288 aa21.03■□□□□ 0.96
TMEM53-204ENST00000372243 MEX3CQ5U5Q3 659 aaKnown RBP21.03■□□□□ 0.96
TMEM53-204ENST00000372243 RUNDC1Q96C34 613 aa21.02■□□□□ 0.96
TMEM53-204ENST00000372243 PLEKHF1Q96S99 279 aa21.02■□□□□ 0.96
TMEM53-204ENST00000372243 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
TMEM53-204ENST00000372243 NLRP2Q9NX02 1062 aa21.02■□□□□ 0.96
TMEM53-204ENST00000372243 TOM1L2Q6ZVM7 507 aa21.02■□□□□ 0.95
TMEM53-204ENST00000372243 AEBP1Q8IUX7 1158 aa21.02■□□□□ 0.95
TMEM53-204ENST00000372243 CARD10Q9BWT7 1032 aa21.02■□□□□ 0.95
TMEM53-204ENST00000372243 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
TMEM53-204ENST00000372243 PLEKHG2Q9H7P9 1386 aa21.01■□□□□ 0.95
TMEM53-204ENST00000372243 LARP1Q6PKG0 1096 aaKnown RBP21.01■□□□□ 0.95
TMEM53-204ENST00000372243 UNC5CLQ8IV45 518 aa21.01■□□□□ 0.95
TMEM53-204ENST00000372243 PRKAR2BP31323 418 aa21■□□□□ 0.95
TMEM53-204ENST00000372243 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
TMEM53-204ENST00000372243 NEFMP07197 916 aa20.98■□□□□ 0.95
TMEM53-204ENST00000372243 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
TMEM53-204ENST00000372243 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
TMEM53-204ENST00000372243 USP21Q9UK80 565 aa20.97■□□□□ 0.95
TMEM53-204ENST00000372243 AFF2P51816 1311 aa20.95■□□□□ 0.95
TMEM53-204ENST00000372243 VPS72Q15906 364 aa20.95■□□□□ 0.94
TMEM53-204ENST00000372243 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
TMEM53-204ENST00000372243 NGEFQ8N5V2 710 aa20.95■□□□□ 0.94
TMEM53-204ENST00000372243 SPATA31A1Q5TZJ5 1347 aa20.95■□□□□ 0.94
TMEM53-204ENST00000372243 RAPGEF4Q8WZA2 1011 aa20.94■□□□□ 0.94
TMEM53-204ENST00000372243 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
TMEM53-204ENST00000372243 THRAP3Q9Y2W1 955 aaKnown RBP20.94■□□□□ 0.94
TMEM53-204ENST00000372243 SPATA31A5Q5VU36 1347 aa20.94■□□□□ 0.94
TMEM53-204ENST00000372243 SPATA31A7Q8IWB4 1347 aa20.94■□□□□ 0.94
TMEM53-204ENST00000372243 TCP11L2Q8N4U5 519 aa20.93■□□□□ 0.94
TMEM53-204ENST00000372243 PARP4Q9UKK3 1724 aaKnown RBP20.93■□□□□ 0.94
TMEM53-204ENST00000372243 APAF1O14727 1248 aa20.93■□□□□ 0.94
TMEM53-204ENST00000372243 MEGF6O75095 1541 aa20.92■□□□□ 0.94
TMEM53-204ENST00000372243 TATP17735 454 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-204ENST00000372243 HNRNPUQ00839 825 aaKnown RBP eCLIP20.92■□□□□ 0.94
TMEM53-204ENST00000372243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.92■□□□□ 0.94
TMEM53-204ENST00000372243 WNK3Q9BYP7 1800 aa20.91■□□□□ 0.94
TMEM53-204ENST00000372243 IL2RBP14784 551 aa20.91■□□□□ 0.94
TMEM53-204ENST00000372243 AMOTQ4VCS5 1084 aa20.91■□□□□ 0.94
TMEM53-204ENST00000372243 OVOS2A0A0G2JMS6 1433 aa20.9■□□□□ 0.94
TMEM53-204ENST00000372243 DISP2A7MBM2 1401 aa20.9■□□□□ 0.94
TMEM53-204ENST00000372243 TMPOP42166 694 aaKnown RBP20.9■□□□□ 0.94
TMEM53-204ENST00000372243 ATRNO75882 1429 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms