RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FRMPD1Q5SYB0 1578 aa11.2□□□□□ -0.62
ATG4A-203ENST00000372232 PDIA6Q15084 440 aa11.2□□□□□ -0.62
ATG4A-203ENST00000372232 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
ATG4A-203ENST00000372232 GIGYF2Q6Y7W6 1299 aaKnown RBP11.2□□□□□ -0.62
ATG4A-203ENST00000372232 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
ATG4A-203ENST00000372232 KIF20AO95235 890 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 MRE11P49959 708 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 EIF3AQ14152 1382 aaKnown RBP11.19□□□□□ -0.62
ATG4A-203ENST00000372232 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 GGT6Q6P531 493 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 NEO1Q92859 1461 aa11.19□□□□□ -0.62
ATG4A-203ENST00000372232 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
ATG4A-203ENST00000372232 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
ATG4A-203ENST00000372232 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
ATG4A-203ENST00000372232 NPATQ14207 1427 aa11.18□□□□□ -0.62
ATG4A-203ENST00000372232 ZSCAN20P17040 1043 aaPredicted RBP11.18□□□□□ -0.62
ATG4A-203ENST00000372232 EXOC6Q8TAG9 804 aa11.18□□□□□ -0.62
ATG4A-203ENST00000372232 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
ATG4A-203ENST00000372232 OFD1O75665 1012 aa11.17□□□□□ -0.62
ATG4A-203ENST00000372232 RAPGEF3O95398 923 aa11.17□□□□□ -0.62
ATG4A-203ENST00000372232 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
ATG4A-203ENST00000372232 TNNT2P45379 298 aaPredicted RBP11.17□□□□□ -0.62
ATG4A-203ENST00000372232 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
ATG4A-203ENST00000372232 KNSTRNQ9Y448 316 aa11.17□□□□□ -0.62
ATG4A-203ENST00000372232 RRP1P56182 461 aaKnown RBP11.16□□□□□ -0.62
ATG4A-203ENST00000372232 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
ATG4A-203ENST00000372232 GTPBP4Q9BZE4 634 aaKnown RBP11.16□□□□□ -0.62
ATG4A-203ENST00000372232 INSRP06213 1382 aa11.16□□□□□ -0.62
ATG4A-203ENST00000372232 KIF1BO60333 1816 aa11.16□□□□□ -0.62
ATG4A-203ENST00000372232 ADGRB3O60242 1522 aa11.16□□□□□ -0.62
ATG4A-203ENST00000372232 ISY1Q9ULR0 285 aaKnown RBP11.15□□□□□ -0.62
ATG4A-203ENST00000372232 ABCA6Q8N139 1617 aa11.15□□□□□ -0.62
ATG4A-203ENST00000372232 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.62
ATG4A-203ENST00000372232 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
ATG4A-203ENST00000372232 ANP32BQ92688 251 aaKnown RBP11.15□□□□□ -0.62
ATG4A-203ENST00000372232 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
ATG4A-203ENST00000372232 SYNMO15061 1565 aa11.15□□□□□ -0.62
ATG4A-203ENST00000372232 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 ABCC3O15438 1527 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 ZMYM4Q5VZL5 1548 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 NOS1P29475 1434 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 GNPATO15228 680 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 LETM1O95202 739 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-203ENST00000372232 TAF3Q5VWG9 929 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
ATG4A-203ENST00000372232 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
ATG4A-203ENST00000372232 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
ATG4A-203ENST00000372232 SECISBP2LQ93073 1101 aaKnown RBP11.13□□□□□ -0.63
ATG4A-203ENST00000372232 PDE3BQ13370 1112 aa11.13□□□□□ -0.63
ATG4A-203ENST00000372232 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
ATG4A-203ENST00000372232 TRIM44Q96DX7 344 aaPredicted RBP11.13□□□□□ -0.63
ATG4A-203ENST00000372232 COG6Q9Y2V7 657 aa11.13□□□□□ -0.63
ATG4A-203ENST00000372232 BLMP54132 1417 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-203ENST00000372232 VGLL3A8MV65 326 aa11.12□□□□□ -0.63
ATG4A-203ENST00000372232 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
ATG4A-203ENST00000372232 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
ATG4A-203ENST00000372232 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
ATG4A-203ENST00000372232 NPC1L1Q9UHC9 1359 aa11.12□□□□□ -0.63
ATG4A-203ENST00000372232 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
ATG4A-203ENST00000372232 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-203ENST00000372232 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
ATG4A-203ENST00000372232 PIK3C2GO75747 1445 aa11.11□□□□□ -0.63
ATG4A-203ENST00000372232 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
ATG4A-203ENST00000372232 CCDC94Q9BW85 323 aaPredicted RBP11.11□□□□□ -0.63
ATG4A-203ENST00000372232 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
ATG4A-203ENST00000372232 ASXL1Q8IXJ9 1541 aa11.11□□□□□ -0.63
ATG4A-203ENST00000372232 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
ATG4A-203ENST00000372232 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
ATG4A-203ENST00000372232 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
ATG4A-203ENST00000372232 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
ATG4A-203ENST00000372232 MYOM1P52179 1685 aa11.1□□□□□ -0.63
ATG4A-203ENST00000372232 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
ATG4A-203ENST00000372232 KDM5AP29375 1690 aaKnown RBP11.09□□□□□ -0.63
ATG4A-203ENST00000372232 MAP3K13O43283 966 aa11.09□□□□□ -0.63
ATG4A-203ENST00000372232 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
ATG4A-203ENST00000372232 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
ATG4A-203ENST00000372232 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
ATG4A-203ENST00000372232 YEATS2Q9ULM3 1422 aa11.08□□□□□ -0.64
ATG4A-203ENST00000372232 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.64
ATG4A-203ENST00000372232 MYO3AQ8NEV4 1616 aa11.08□□□□□ -0.64
ATG4A-203ENST00000372232 RICTORQ6R327 1708 aa11.08□□□□□ -0.64
ATG4A-203ENST00000372232 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
ATG4A-203ENST00000372232 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
ATG4A-203ENST00000372232 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
ATG4A-203ENST00000372232 PPLO60437 1756 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 E9PSI1 815 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 DSG2Q14126 1118 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
ATG4A-203ENST00000372232 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
ATG4A-203ENST00000372232 ZSCAN30Q86W11 494 aa11.07□□□□□ -0.64
ATG4A-203ENST00000372232 VIRMAQ69YN4 1812 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms