RNA–Protein interactions for RNA: ENST00000371953.7

PTEN-201, Transcript of phosphatase and tensin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTEN, Length 9,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-201ENST00000371953 MAGEC2Q9UBF1 373 aaPredicted RBP19.52■□□□□ 0.72
PTEN-201ENST00000371953 TTC31Q49AM3 519 aaPredicted RBP19.52■□□□□ 0.72
PTEN-201ENST00000371953 DHX16O60231 1041 aaKnown RBP19.52■□□□□ 0.71
PTEN-201ENST00000371953 BRMS1Q9HCU9 246 aa19.52■□□□□ 0.71
PTEN-201ENST00000371953 PLEKHH1Q9ULM0 1364 aa19.52■□□□□ 0.71
PTEN-201ENST00000371953 FAM193AP78312 1265 aa19.51■□□□□ 0.71
PTEN-201ENST00000371953 GBP2P32456 591 aaPredicted RBP19.51■□□□□ 0.71
PTEN-201ENST00000371953 CFAP45Q9UL16 551 aa19.51■□□□□ 0.71
PTEN-201ENST00000371953 G3BP1Q13283 466 aaKnown RBP eCLIP19.51■□□□□ 0.71
PTEN-201ENST00000371953 ANKRD1Q15327 319 aa19.51■□□□□ 0.71
PTEN-201ENST00000371953 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
PTEN-201ENST00000371953 SETSIPP0DME0 302 aa19.5■□□□□ 0.71
PTEN-201ENST00000371953 NEK4P51957 841 aa19.5■□□□□ 0.71
PTEN-201ENST00000371953 FEZ1Q99689 392 aa19.5■□□□□ 0.71
PTEN-201ENST00000371953 CCDC183Q5T5S1 534 aa19.5■□□□□ 0.71
PTEN-201ENST00000371953 HSP90AB4PQ58FF6 505 aa19.5■□□□□ 0.71
PTEN-201ENST00000371953 RASSF4Q9H2L5 321 aa19.49■□□□□ 0.71
PTEN-201ENST00000371953 SMTNL1A8MU46 457 aa19.49■□□□□ 0.71
PTEN-201ENST00000371953 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
PTEN-201ENST00000371953 CASQ1P31415 396 aa19.49■□□□□ 0.71
PTEN-201ENST00000371953 TNNT1P13805 278 aa19.49■□□□□ 0.71
PTEN-201ENST00000371953 XBP1P17861 261 aa19.49■□□□□ 0.71
PTEN-201ENST00000371953 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
PTEN-201ENST00000371953 PAIP2Q9BPZ3 127 aaKnown RBP19.49■□□□□ 0.71
PTEN-201ENST00000371953 ELL2O00472 640 aaPredicted RBP19.48■□□□□ 0.71
PTEN-201ENST00000371953 DIAPH1O60610 1272 aaKnown RBP19.48■□□□□ 0.71
PTEN-201ENST00000371953 GOLGA6L9A6NEM1 432 aa19.48■□□□□ 0.71
PTEN-201ENST00000371953 CAVIN2O95810 425 aa19.48■□□□□ 0.71
PTEN-201ENST00000371953 RRBP1Q9P2E9 1410 aaKnown RBP19.48■□□□□ 0.71
PTEN-201ENST00000371953 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
PTEN-201ENST00000371953 LMAN1P49257 510 aa19.48■□□□□ 0.71
PTEN-201ENST00000371953 MAP2K1Q02750 393 aaPredicted RBP19.48■□□□□ 0.71
PTEN-201ENST00000371953 NUP62CLQ9H1M0 184 aa19.48■□□□□ 0.71
PTEN-201ENST00000371953 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
PTEN-201ENST00000371953 HIP1O00291 1037 aa19.47■□□□□ 0.71
PTEN-201ENST00000371953 SARNPP82979 210 aaKnown RBP19.47■□□□□ 0.71
PTEN-201ENST00000371953 CCDC27Q2M243 656 aa19.47■□□□□ 0.71
PTEN-201ENST00000371953 V9GYY5 206 aaPredicted RBP19.47■□□□□ 0.71
PTEN-201ENST00000371953 PTPRGP23470 1445 aa19.47■□□□□ 0.71
PTEN-201ENST00000371953 GSDMDP57764 484 aa19.47■□□□□ 0.71
PTEN-201ENST00000371953 ARHGAP29Q52LW3 1261 aa19.47■□□□□ 0.71
PTEN-201ENST00000371953 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
PTEN-201ENST00000371953 MYOM3Q5VTT5 1437 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 CNTROBQ8N137 903 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 KIF5CO60282 957 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 TXLNAP40222 546 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 SPDYE4A6NLX3 237 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 ATF3P18847 181 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 TUBB4BP68371 445 aa19.46■□□□□ 0.71
PTEN-201ENST00000371953 FMNL2Q96PY5 1086 aa19.45■□□□□ 0.7
PTEN-201ENST00000371953 RIPK4P57078 832 aa19.45■□□□□ 0.7
PTEN-201ENST00000371953 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
PTEN-201ENST00000371953 SWAP70Q9UH65 585 aa19.45■□□□□ 0.7
PTEN-201ENST00000371953 NECTIN2Q92692 538 aa19.45■□□□□ 0.7
PTEN-201ENST00000371953 STIM1Q13586 685 aa19.45■□□□□ 0.7
PTEN-201ENST00000371953 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
PTEN-201ENST00000371953 C16orf45Q96MC5 204 aaPredicted RBP19.45■□□□□ 0.7
PTEN-201ENST00000371953 TAX1BP1Q86VP1 789 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 SMARCC1Q92922 1105 aaPredicted RBP19.44■□□□□ 0.7
PTEN-201ENST00000371953 TRERF1Q96PN7 1200 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 TMCO5BA8MYB1 307 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 HSPA4P34932 840 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 GIGYF2Q6Y7W6 1299 aaKnown RBP19.44■□□□□ 0.7
PTEN-201ENST00000371953 WDR66Q8TBY9 1149 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 RUNDC1Q96C34 613 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 EPB41L2O43491 1005 aaKnown RBP19.44■□□□□ 0.7
PTEN-201ENST00000371953 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
PTEN-201ENST00000371953 SPECC1LQ69YQ0 1117 aa19.44■□□□□ 0.7
PTEN-201ENST00000371953 UPF3BQ9BZI7 483 aaKnown RBP19.43■□□□□ 0.7
PTEN-201ENST00000371953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.43■□□□□ 0.7
PTEN-201ENST00000371953 LIG1P18858 919 aa19.43■□□□□ 0.7
PTEN-201ENST00000371953 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
PTEN-201ENST00000371953 CCDC83Q8IWF9 413 aa19.42■□□□□ 0.7
PTEN-201ENST00000371953 CCDC175P0C221 793 aa19.42■□□□□ 0.7
PTEN-201ENST00000371953 ARFGAP3Q9NP61 516 aa19.42■□□□□ 0.7
PTEN-201ENST00000371953 CCDC171Q6TFL3 1326 aa19.42■□□□□ 0.7
PTEN-201ENST00000371953 RALYLQ86SE5 291 aaKnown RBP19.42■□□□□ 0.7
PTEN-201ENST00000371953 RNF187Q5TA31 235 aaPredicted RBP19.41■□□□□ 0.7
PTEN-201ENST00000371953 A0A1B0GUA9 196 aa19.41■□□□□ 0.7
PTEN-201ENST00000371953 TSPYL4Q9UJ04 414 aa19.41■□□□□ 0.7
PTEN-201ENST00000371953 FYCO1Q9BQS8 1478 aa19.4■□□□□ 0.7
PTEN-201ENST00000371953 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
PTEN-201ENST00000371953 APAF1O14727 1248 aa19.4■□□□□ 0.7
PTEN-201ENST00000371953 TUBB4AP04350 444 aa19.4■□□□□ 0.7
PTEN-201ENST00000371953 OGFRQ9NZT2 677 aa19.4■□□□□ 0.7
PTEN-201ENST00000371953 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
PTEN-201ENST00000371953 A0A1B0GUL7 405 aa19.39■□□□□ 0.69
PTEN-201ENST00000371953 ME1P48163 572 aa19.39■□□□□ 0.69
PTEN-201ENST00000371953 TERF1P54274 439 aa19.39■□□□□ 0.69
PTEN-201ENST00000371953 RSRC1Q96IZ7 334 aaKnown RBP19.39■□□□□ 0.69
PTEN-201ENST00000371953 UVSSAQ2YD98 709 aa19.38■□□□□ 0.69
PTEN-201ENST00000371953 ANKS4BQ8N8V4 417 aa19.38■□□□□ 0.69
PTEN-201ENST00000371953 CLIP2Q9UDT6 1046 aa19.38■□□□□ 0.69
PTEN-201ENST00000371953 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
PTEN-201ENST00000371953 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
PTEN-201ENST00000371953 SPATA32Q96LK8 384 aa19.38■□□□□ 0.69
PTEN-201ENST00000371953 SMC1AQ14683 1233 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms