RNA–Protein interactions for RNA: ENST00000371649.5

EDF1-203, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 2 BASIC

Gene EDF1, Length 790 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-203ENST00000371649 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
EDF1-203ENST00000371649 PEAK1Q9H792 1746 aa22.67■■□□□ 1.22
EDF1-203ENST00000371649 WDR17Q8IZU2 1322 aa22.65■■□□□ 1.22
EDF1-203ENST00000371649 EXOC5O00471 708 aa22.65■■□□□ 1.22
EDF1-203ENST00000371649 SOX12O15370 315 aa22.65■■□□□ 1.22
EDF1-203ENST00000371649 CASZ1Q86V15 1759 aa22.64■■□□□ 1.22
EDF1-203ENST00000371649 NBPF1Q3BBV0 1214 aa22.64■■□□□ 1.21
EDF1-203ENST00000371649 KCNH5Q8NCM2 988 aa22.64■■□□□ 1.21
EDF1-203ENST00000371649 USP6P35125 1406 aa22.64■■□□□ 1.21
EDF1-203ENST00000371649 TXNRD1Q16881 649 aa22.63■■□□□ 1.21
EDF1-203ENST00000371649 MARCH10Q8NA82 808 aaPredicted RBP22.63■■□□□ 1.21
EDF1-203ENST00000371649 PTF1AQ7RTS3 328 aa22.62■■□□□ 1.21
EDF1-203ENST00000371649 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
EDF1-203ENST00000371649 MYOM1P52179 1685 aa22.62■■□□□ 1.21
EDF1-203ENST00000371649 QRICH2Q9H0J4 1663 aa22.62■■□□□ 1.21
EDF1-203ENST00000371649 WNK3Q9BYP7 1800 aa22.61■■□□□ 1.21
EDF1-203ENST00000371649 SLC15A2Q16348 729 aa22.61■■□□□ 1.21
EDF1-203ENST00000371649 ZNF784Q8NCA9 323 aaPredicted RBP22.61■■□□□ 1.21
EDF1-203ENST00000371649 SLIT3O75094 1523 aa22.61■■□□□ 1.21
EDF1-203ENST00000371649 FHDC1Q9C0D6 1143 aaPredicted RBP22.6■■□□□ 1.21
EDF1-203ENST00000371649 MTFR1LQ9H019 292 aa22.6■■□□□ 1.21
EDF1-203ENST00000371649 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
EDF1-203ENST00000371649 PROM2Q8N271 834 aa22.59■■□□□ 1.21
EDF1-203ENST00000371649 SYT17Q9BSW7 474 aa22.59■■□□□ 1.21
EDF1-203ENST00000371649 CARD10Q9BWT7 1032 aa22.59■■□□□ 1.21
EDF1-203ENST00000371649 EVC2Q86UK5 1308 aa22.58■■□□□ 1.21
EDF1-203ENST00000371649 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.21
EDF1-203ENST00000371649 PTGER2P43116 358 aa22.58■■□□□ 1.21
EDF1-203ENST00000371649 AXIN2Q9Y2T1 843 aa22.58■■□□□ 1.21
EDF1-203ENST00000371649 CHD4Q14839 1912 aa22.57■■□□□ 1.2
EDF1-203ENST00000371649 ZNF692Q9BU19 519 aaPredicted RBP22.57■■□□□ 1.2
EDF1-203ENST00000371649 RGPD5Q99666 1765 aa22.57■■□□□ 1.2
EDF1-203ENST00000371649 KAT6BQ8WYB5 2073 aa22.57■■□□□ 1.2
EDF1-203ENST00000371649 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
EDF1-203ENST00000371649 CCDC7Q96M83 1385 aa22.55■■□□□ 1.2
EDF1-203ENST00000371649 ARHGEF25Q86VW2 580 aa22.55■■□□□ 1.2
EDF1-203ENST00000371649 COL18A1P39060 1754 aa22.55■■□□□ 1.2
EDF1-203ENST00000371649 BCL9O00512 1426 aa22.55■■□□□ 1.2
EDF1-203ENST00000371649 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
EDF1-203ENST00000371649 ARXQ96QS3 562 aa22.54■■□□□ 1.2
EDF1-203ENST00000371649 KLHL34Q8N239 644 aa22.53■■□□□ 1.2
EDF1-203ENST00000371649 GPR162Q16538 588 aa22.52■■□□□ 1.2
EDF1-203ENST00000371649 TTC21BQ7Z4L5 1316 aa22.52■■□□□ 1.2
EDF1-203ENST00000371649 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
EDF1-203ENST00000371649 NLRP2Q9NX02 1062 aa22.5■■□□□ 1.19
EDF1-203ENST00000371649 C1QTNF8P60827 252 aa22.49■■□□□ 1.19
EDF1-203ENST00000371649 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
EDF1-203ENST00000371649 TRPM1Q7Z4N2 1603 aa22.49■■□□□ 1.19
EDF1-203ENST00000371649 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
EDF1-203ENST00000371649 POLD1P28340 1107 aa22.47■■□□□ 1.19
EDF1-203ENST00000371649 KTN1Q86UP2 1357 aaKnown RBP22.47■■□□□ 1.19
EDF1-203ENST00000371649 NHSQ6T4R5 1651 aa22.46■■□□□ 1.19
EDF1-203ENST00000371649 IL2RBP14784 551 aa22.45■■□□□ 1.18
EDF1-203ENST00000371649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.43■■□□□ 1.18
EDF1-203ENST00000371649 GIGYF1O75420 1035 aaPredicted RBP22.42■■□□□ 1.18
EDF1-203ENST00000371649 SGIP1Q9BQI5 828 aa22.42■■□□□ 1.18
EDF1-203ENST00000371649 ABCC6O95255 1503 aa22.41■■□□□ 1.18
EDF1-203ENST00000371649 BTAF1O14981 1849 aa22.41■■□□□ 1.18
EDF1-203ENST00000371649 ROCK2O75116 1388 aaKnown RBP22.4■■□□□ 1.18
EDF1-203ENST00000371649 SLC16A10Q8TF71 515 aa22.39■■□□□ 1.17
EDF1-203ENST00000371649 NFAT5O94916 1531 aa22.39■■□□□ 1.17
EDF1-203ENST00000371649 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
EDF1-203ENST00000371649 ERBB3P21860 1342 aa22.38■■□□□ 1.17
EDF1-203ENST00000371649 UTRNP46939 3433 aa22.38■■□□□ 1.17
EDF1-203ENST00000371649 ZNF827Q17R98 1081 aa22.37■■□□□ 1.17
EDF1-203ENST00000371649 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
EDF1-203ENST00000371649 ANKRD24Q8TF21 1146 aa22.37■■□□□ 1.17
EDF1-203ENST00000371649 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
EDF1-203ENST00000371649 SYTL4Q96C24 671 aaPredicted RBP22.37■■□□□ 1.17
EDF1-203ENST00000371649 TFCP2L1Q9NZI6 479 aa22.37■■□□□ 1.17
EDF1-203ENST00000371649 LTN1O94822 1766 aa22.36■■□□□ 1.17
EDF1-203ENST00000371649 SLC27A3Q5K4L6 730 aa22.36■■□□□ 1.17
EDF1-203ENST00000371649 HDGFL2Q7Z4V5 671 aaPredicted RBP22.36■■□□□ 1.17
EDF1-203ENST00000371649 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
EDF1-203ENST00000371649 MSH5O43196 834 aa22.35■■□□□ 1.17
EDF1-203ENST00000371649 PAPPAQ13219 1627 aa22.34■■□□□ 1.17
EDF1-203ENST00000371649 LRRC4BQ9NT99 713 aa22.33■■□□□ 1.17
EDF1-203ENST00000371649 MON2Q7Z3U7 1717 aa22.33■■□□□ 1.17
EDF1-203ENST00000371649 NME9Q86XW9 330 aa22.32■■□□□ 1.16
EDF1-203ENST00000371649 LTV1Q96GA3 475 aaPredicted RBP22.31■■□□□ 1.16
EDF1-203ENST00000371649 USP31Q70CQ4 1352 aa22.3■■□□□ 1.16
EDF1-203ENST00000371649 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
EDF1-203ENST00000371649 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
EDF1-203ENST00000371649 GRIN3BO60391 1043 aa22.29■■□□□ 1.16
EDF1-203ENST00000371649 QSER1Q2KHR3 1735 aa22.28■■□□□ 1.16
EDF1-203ENST00000371649 PNPLA7Q6ZV29 1317 aa22.28■■□□□ 1.16
EDF1-203ENST00000371649 TERF2IPQ9NYB0 399 aa22.27■■□□□ 1.16
EDF1-203ENST00000371649 PRIM1P49642 420 aaKnown RBP22.25■■□□□ 1.15
EDF1-203ENST00000371649 IFFO2Q5TF58 517 aa22.25■■□□□ 1.15
EDF1-203ENST00000371649 KCNQ4P56696 695 aa22.24■■□□□ 1.15
EDF1-203ENST00000371649 NLGN2Q8NFZ4 835 aa22.24■■□□□ 1.15
EDF1-203ENST00000371649 CCNL1Q9UK58 526 aaPredicted RBP22.24■■□□□ 1.15
EDF1-203ENST00000371649 USP54Q70EL1 1684 aa22.23■■□□□ 1.15
EDF1-203ENST00000371649 FAM208AQ9UK61 1670 aaKnown RBP22.23■■□□□ 1.15
EDF1-203ENST00000371649 AMPHP49418 695 aa22.22■■□□□ 1.15
EDF1-203ENST00000371649 IP6K1Q92551 441 aa22.22■■□□□ 1.15
EDF1-203ENST00000371649 SIN3AQ96ST3 1273 aa22.22■■□□□ 1.15
EDF1-203ENST00000371649 EDC4Q6P2E9 1401 aaKnown RBP22.22■■□□□ 1.15
EDF1-203ENST00000371649 HMGB2P26583 209 aaKnown RBP22.21■■□□□ 1.15
EDF1-203ENST00000371649 CARD11Q9BXL7 1154 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms