RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
EDF1-202ENST00000371648 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
EDF1-202ENST00000371648 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
EDF1-202ENST00000371648 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
EDF1-202ENST00000371648 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
EDF1-202ENST00000371648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
EDF1-202ENST00000371648 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
EDF1-202ENST00000371648 SLC12A5Q9H2X9 1139 aa20.18■□□□□ 0.82
EDF1-202ENST00000371648 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
EDF1-202ENST00000371648 EIF4G2P78344 907 aaKnown RBP eCLIP20.17■□□□□ 0.82
EDF1-202ENST00000371648 DDB1Q16531 1140 aa20.17■□□□□ 0.82
EDF1-202ENST00000371648 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
EDF1-202ENST00000371648 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
EDF1-202ENST00000371648 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
EDF1-202ENST00000371648 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
EDF1-202ENST00000371648 TERF2IPQ9NYB0 399 aa20.15■□□□□ 0.82
EDF1-202ENST00000371648 COL18A1P39060 1754 aa20.14■□□□□ 0.81
EDF1-202ENST00000371648 AKAP12Q02952 1782 aa20.14■□□□□ 0.81
EDF1-202ENST00000371648 LRP5O75197 1615 aa20.14■□□□□ 0.81
EDF1-202ENST00000371648 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
EDF1-202ENST00000371648 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
EDF1-202ENST00000371648 NME9Q86XW9 330 aa20.13■□□□□ 0.81
EDF1-202ENST00000371648 OVOS2A0A0G2JMS6 1433 aa20.12■□□□□ 0.81
EDF1-202ENST00000371648 OVOS2A0A0J9YW53 1432 aa20.12■□□□□ 0.81
EDF1-202ENST00000371648 OVOS2Q6IE36 1432 aa20.12■□□□□ 0.81
EDF1-202ENST00000371648 HSPA5P11021 654 aaKnown RBP20.12■□□□□ 0.81
EDF1-202ENST00000371648 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
EDF1-202ENST00000371648 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
EDF1-202ENST00000371648 CARD10Q9BWT7 1032 aa20.12■□□□□ 0.81
EDF1-202ENST00000371648 CDCA7Q9BWT1 371 aaPredicted RBP20.11■□□□□ 0.81
EDF1-202ENST00000371648 MARCH10Q8NA82 808 aaPredicted RBP20.1■□□□□ 0.81
EDF1-202ENST00000371648 NFAT5O94916 1531 aa20.09■□□□□ 0.81
EDF1-202ENST00000371648 PTF1AQ7RTS3 328 aa20.09■□□□□ 0.81
EDF1-202ENST00000371648 CD163L1Q9NR16 1453 aa20.09■□□□□ 0.81
EDF1-202ENST00000371648 USP31Q70CQ4 1352 aa20.08■□□□□ 0.81
EDF1-202ENST00000371648 LRRC37A3O60309 1634 aa20.08■□□□□ 0.8
EDF1-202ENST00000371648 EXOC5O00471 708 aa20.07■□□□□ 0.8
EDF1-202ENST00000371648 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
EDF1-202ENST00000371648 NINLQ9Y2I6 1382 aa20.07■□□□□ 0.8
EDF1-202ENST00000371648 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
EDF1-202ENST00000371648 MON2Q7Z3U7 1717 aa20.06■□□□□ 0.8
EDF1-202ENST00000371648 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
EDF1-202ENST00000371648 PLSCR1O15162 318 aa20.05■□□□□ 0.8
EDF1-202ENST00000371648 NLRP2Q9NX02 1062 aa20.05■□□□□ 0.8
EDF1-202ENST00000371648 RREB1Q92766 1687 aa20.05■□□□□ 0.8
EDF1-202ENST00000371648 CCDC7Q96M83 1385 aa20.05■□□□□ 0.8
EDF1-202ENST00000371648 A0A1W2PP64 1363 aa20.04■□□□□ 0.8
EDF1-202ENST00000371648 NUP188Q5SRE5 1749 aa20.04■□□□□ 0.8
EDF1-202ENST00000371648 EDC4Q6P2E9 1401 aaKnown RBP20.03■□□□□ 0.8
EDF1-202ENST00000371648 ERBB3P21860 1342 aa20.02■□□□□ 0.79
EDF1-202ENST00000371648 ANKRD24Q8TF21 1146 aa20.01■□□□□ 0.79
EDF1-202ENST00000371648 WNK3Q9BYP7 1800 aa20■□□□□ 0.79
EDF1-202ENST00000371648 PROM2Q8N271 834 aa20■□□□□ 0.79
EDF1-202ENST00000371648 ABCC6O95255 1503 aa20■□□□□ 0.79
EDF1-202ENST00000371648 BCL9O00512 1426 aa20■□□□□ 0.79
EDF1-202ENST00000371648 SBF2Q86WG5 1849 aa19.99■□□□□ 0.79
EDF1-202ENST00000371648 ANKRD36BQ8N2N9 1353 aa19.99■□□□□ 0.79
EDF1-202ENST00000371648 KCNQ2O43526 872 aa19.98■□□□□ 0.79
EDF1-202ENST00000371648 IL2RBP14784 551 aa19.98■□□□□ 0.79
EDF1-202ENST00000371648 ANO8Q9HCE9 1232 aaPredicted RBP19.98■□□□□ 0.79
EDF1-202ENST00000371648 TNS2Q63HR2 1409 aa19.97■□□□□ 0.79
EDF1-202ENST00000371648 LTV1Q96GA3 475 aaPredicted RBP19.97■□□□□ 0.79
EDF1-202ENST00000371648 ACSBG1Q96GR2 724 aa19.97■□□□□ 0.79
EDF1-202ENST00000371648 SPON1Q9HCB6 807 aa19.97■□□□□ 0.79
EDF1-202ENST00000371648 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
EDF1-202ENST00000371648 TXNRD1Q16881 649 aa19.96■□□□□ 0.79
EDF1-202ENST00000371648 IP6K1Q92551 441 aa19.96■□□□□ 0.79
EDF1-202ENST00000371648 COG3Q96JB2 828 aa19.96■□□□□ 0.79
EDF1-202ENST00000371648 PPP1R1BQ9UD71 204 aaPredicted RBP19.95■□□□□ 0.78
EDF1-202ENST00000371648 LTN1O94822 1766 aa19.94■□□□□ 0.78
EDF1-202ENST00000371648 FBLN1P23142 703 aa19.94■□□□□ 0.78
EDF1-202ENST00000371648 PDGFDQ9GZP0 370 aaPredicted RBP19.93■□□□□ 0.78
EDF1-202ENST00000371648 RGPD3A6NKT7 1758 aaPredicted RBP19.92■□□□□ 0.78
EDF1-202ENST00000371648 RGPD4Q7Z3J3 1758 aa19.92■□□□□ 0.78
EDF1-202ENST00000371648 CARD14Q9BXL6 1004 aa19.91■□□□□ 0.78
EDF1-202ENST00000371648 GGNBP2Q9H3C7 697 aa19.91■□□□□ 0.78
EDF1-202ENST00000371648 STK32BQ9NY57 414 aa19.91■□□□□ 0.78
EDF1-202ENST00000371648 MAP3K19Q56UN5 1328 aa19.91■□□□□ 0.78
EDF1-202ENST00000371648 FYB1O15117 783 aa19.9■□□□□ 0.78
EDF1-202ENST00000371648 AMPHP49418 695 aa19.9■□□□□ 0.78
EDF1-202ENST00000371648 ZBTB7AO95365 584 aa19.89■□□□□ 0.77
EDF1-202ENST00000371648 HOXC9P31274 260 aa19.89■□□□□ 0.77
EDF1-202ENST00000371648 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.77
EDF1-202ENST00000371648 PANK3Q9H999 370 aa19.89■□□□□ 0.77
EDF1-202ENST00000371648 MYOM1P52179 1685 aa19.88■□□□□ 0.77
EDF1-202ENST00000371648 SLC15A2Q16348 729 aa19.88■□□□□ 0.77
EDF1-202ENST00000371648 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
EDF1-202ENST00000371648 RRS1Q15050 365 aaKnown RBP19.86■□□□□ 0.77
EDF1-202ENST00000371648 ATF5Q9Y2D1 282 aaPredicted RBP19.86■□□□□ 0.77
EDF1-202ENST00000371648 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
EDF1-202ENST00000371648 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
EDF1-202ENST00000371648 KIF7Q2M1P5 1343 aa19.84■□□□□ 0.77
EDF1-202ENST00000371648 KIF20BQ96Q89 1820 aa19.82■□□□□ 0.76
EDF1-202ENST00000371648 CASZ1Q86V15 1759 aa19.82■□□□□ 0.76
EDF1-202ENST00000371648 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
EDF1-202ENST00000371648 PTGER2P43116 358 aa19.81■□□□□ 0.76
EDF1-202ENST00000371648 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
EDF1-202ENST00000371648 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
EDF1-202ENST00000371648 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
EDF1-202ENST00000371648 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms