RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 GSPT1P15170 499 aaKnown RBP19.8■□□□□ 0.76
CHD1L-203ENST00000369259 ADGRF5Q8IZF2 1346 aa19.8■□□□□ 0.76
CHD1L-203ENST00000369259 NOLC1Q14978 699 aaKnown RBP eCLIP19.8■□□□□ 0.764e-7■■■■□ 25.6
CHD1L-203ENST00000369259 ATP2B3Q16720 1220 aa19.8■□□□□ 0.76
CHD1L-203ENST00000369259 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 ABCA6Q8N139 1617 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 USP32Q8NFA0 1604 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 FBLN2P98095 1184 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 KIF3AQ9Y496 699 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 MYOM2P54296 1465 aa19.79■□□□□ 0.76
CHD1L-203ENST00000369259 MAP3K4Q9Y6R4 1608 aa19.78■□□□□ 0.76
CHD1L-203ENST00000369259 ZBTB7CA1YPR0 619 aa19.78■□□□□ 0.76
CHD1L-203ENST00000369259 BRPF1P55201 1214 aaPredicted RBP19.78■□□□□ 0.76
CHD1L-203ENST00000369259 CHAMP1Q96JM3 812 aa19.78■□□□□ 0.76
CHD1L-203ENST00000369259 SIRT2Q8IXJ6 389 aa19.77■□□□□ 0.76
CHD1L-203ENST00000369259 PLEKHM2Q8IWE5 1019 aa19.76■□□□□ 0.75
CHD1L-203ENST00000369259 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
CHD1L-203ENST00000369259 SYAP1Q96A49 352 aaPredicted RBP19.76■□□□□ 0.75
CHD1L-203ENST00000369259 NEURL4Q96JN8 1562 aa19.75■□□□□ 0.75
CHD1L-203ENST00000369259 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
CHD1L-203ENST00000369259 INTS3Q68E01 1043 aaKnown RBP19.75■□□□□ 0.75
CHD1L-203ENST00000369259 NSD2O96028 1365 aa19.74■□□□□ 0.75
CHD1L-203ENST00000369259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.75
CHD1L-203ENST00000369259 UVSSAQ2YD98 709 aa19.74■□□□□ 0.75
CHD1L-203ENST00000369259 TTC22Q5TAA0 569 aa19.74■□□□□ 0.75
CHD1L-203ENST00000369259 ZNF428Q96B54 188 aa19.74■□□□□ 0.75
CHD1L-203ENST00000369259 BBXQ8WY36 941 aaPredicted RBP19.73■□□□□ 0.75
CHD1L-203ENST00000369259 ZNF830Q96NB3 372 aaPredicted RBP19.73■□□□□ 0.75
CHD1L-203ENST00000369259 BCL2L12Q9HB09 334 aa19.73■□□□□ 0.75
CHD1L-203ENST00000369259 SPTLC3Q9NUV7 552 aa19.73■□□□□ 0.75
CHD1L-203ENST00000369259 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
CHD1L-203ENST00000369259 PPRC1Q5VV67 1664 aaKnown RBP19.73■□□□□ 0.75
CHD1L-203ENST00000369259 FKBP5Q13451 457 aaPredicted RBP19.73■□□□□ 0.75
CHD1L-203ENST00000369259 ARHGAP45Q92619 1136 aa19.73■□□□□ 0.75
CHD1L-203ENST00000369259 PDCL2Q8N4E4 241 aa19.72■□□□□ 0.75
CHD1L-203ENST00000369259 FOXD4L5Q5VV16 416 aaPredicted RBP19.72■□□□□ 0.75
CHD1L-203ENST00000369259 FAM184AQ8NB25 1140 aa19.72■□□□□ 0.75
CHD1L-203ENST00000369259 FOXD4L4Q8WXT5 416 aaPredicted RBP19.72■□□□□ 0.75
CHD1L-203ENST00000369259 PHF14O94880 888 aa19.71■□□□□ 0.75
CHD1L-203ENST00000369259 FAM177BA6PVY3 158 aa19.71■□□□□ 0.75
CHD1L-203ENST00000369259 MPNDQ8N594 471 aa19.7■□□□□ 0.74
CHD1L-203ENST00000369259 BRD1O95696 1058 aa19.7■□□□□ 0.74
CHD1L-203ENST00000369259 TTC12Q9H892 705 aaPredicted RBP19.7■□□□□ 0.74
CHD1L-203ENST00000369259 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
CHD1L-203ENST00000369259 GTF2E1P29083 439 aaPredicted RBP19.69■□□□□ 0.74
CHD1L-203ENST00000369259 CASC1Q6TDU7 716 aa19.69■□□□□ 0.74
CHD1L-203ENST00000369259 C17orf53Q8N3J3 647 aaPredicted RBP19.69■□□□□ 0.74
CHD1L-203ENST00000369259 TAF3Q5VWG9 929 aa19.69■□□□□ 0.74
CHD1L-203ENST00000369259 MRPL50Q8N5N7 158 aaKnown RBP19.69■□□□□ 0.74
CHD1L-203ENST00000369259 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
CHD1L-203ENST00000369259 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
CHD1L-203ENST00000369259 USP25Q9UHP3 1055 aa19.68■□□□□ 0.74
CHD1L-203ENST00000369259 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
CHD1L-203ENST00000369259 ADCY5O95622 1261 aa19.67■□□□□ 0.74
CHD1L-203ENST00000369259 TET3O43151 1660 aa19.67■□□□□ 0.74
CHD1L-203ENST00000369259 NRXN1Q9ULB1 1477 aa19.67■□□□□ 0.74
CHD1L-203ENST00000369259 REC8O95072 547 aa19.66■□□□□ 0.74
CHD1L-203ENST00000369259 ANKRD7Q92527 254 aa19.66■□□□□ 0.74
CHD1L-203ENST00000369259 DCTPP1Q9H773 170 aa19.66■□□□□ 0.74
CHD1L-203ENST00000369259 DIAPH3Q9NSV4 1193 aa19.66■□□□□ 0.74
CHD1L-203ENST00000369259 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
CHD1L-203ENST00000369259 ABCC4O15439 1325 aa19.66■□□□□ 0.74
CHD1L-203ENST00000369259 TMX3Q96JJ7 454 aa19.65■□□□□ 0.74
CHD1L-203ENST00000369259 SDSP20132 328 aa19.65■□□□□ 0.74
CHD1L-203ENST00000369259 PDE4CQ08493 712 aa19.65■□□□□ 0.74
CHD1L-203ENST00000369259 C16orf71Q8IYS4 520 aaPredicted RBP19.65■□□□□ 0.74
CHD1L-203ENST00000369259 VAMP4O75379 141 aa19.64■□□□□ 0.74
CHD1L-203ENST00000369259 YEATS2Q9ULM3 1422 aa19.64■□□□□ 0.73
CHD1L-203ENST00000369259 SETBP1Q9Y6X0 1596 aa19.64■□□□□ 0.73
CHD1L-203ENST00000369259 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.73
CHD1L-203ENST00000369259 U2AF2P26368 475 aaKnown RBP eCLIP19.64■□□□□ 0.733e-7■■■□□ 14.6
CHD1L-203ENST00000369259 CHAF1AQ13111 956 aaPredicted RBP19.64■□□□□ 0.73
CHD1L-203ENST00000369259 FEZ1Q99689 392 aa19.63■□□□□ 0.73
CHD1L-203ENST00000369259 ZC3H13Q5T200 1668 aaKnown RBP19.63■□□□□ 0.73
CHD1L-203ENST00000369259 MCM2P49736 904 aa19.63■□□□□ 0.73
CHD1L-203ENST00000369259 PUS7Q96PZ0 661 aaKnown RBP19.63■□□□□ 0.73
CHD1L-203ENST00000369259 QRICH2Q9H0J4 1663 aa19.62■□□□□ 0.73
CHD1L-203ENST00000369259 RIOK3O14730 519 aaKnown RBP19.62■□□□□ 0.73
CHD1L-203ENST00000369259 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
CHD1L-203ENST00000369259 GADD45BO75293 160 aaPredicted RBP19.62■□□□□ 0.73
CHD1L-203ENST00000369259 CUL4AQ13619 759 aa19.62■□□□□ 0.73
CHD1L-203ENST00000369259 UGGT1Q9NYU2 1555 aa19.61■□□□□ 0.73
CHD1L-203ENST00000369259 CTIFO43310 598 aaKnown RBP19.61■□□□□ 0.73
CHD1L-203ENST00000369259 NEK4P51957 841 aa19.61■□□□□ 0.73
CHD1L-203ENST00000369259 SPAG9O60271 1321 aaKnown RBP19.61■□□□□ 0.73
CHD1L-203ENST00000369259 DEPDC5O75140 1603 aa19.61■□□□□ 0.73
CHD1L-203ENST00000369259 ERC2O15083 957 aa19.61■□□□□ 0.73
CHD1L-203ENST00000369259 KIAA1524Q8TCG1 905 aa19.61■□□□□ 0.73
CHD1L-203ENST00000369259 TMEM51Q9NW97 253 aa19.61■□□□□ 0.73
CHD1L-203ENST00000369259 OTUD7AQ8TE49 926 aaPredicted RBP19.6■□□□□ 0.73
CHD1L-203ENST00000369259 OGFRQ9NZT2 677 aa19.6■□□□□ 0.73
CHD1L-203ENST00000369259 IFT172Q9UG01 1749 aa19.6■□□□□ 0.73
CHD1L-203ENST00000369259 USP48Q86UV5 1035 aa19.59■□□□□ 0.73
CHD1L-203ENST00000369259 PLCH2O75038 1416 aa19.59■□□□□ 0.73
CHD1L-203ENST00000369259 IGSF3O75054 1194 aa19.59■□□□□ 0.73
CHD1L-203ENST00000369259 KDM4AO75164 1064 aa19.59■□□□□ 0.73
CHD1L-203ENST00000369259 CCDC183Q5T5S1 534 aa19.59■□□□□ 0.73
CHD1L-203ENST00000369259 INTS4Q96HW7 963 aaKnown RBP19.59■□□□□ 0.73
CHD1L-203ENST00000369259 ZNF771Q7L3S4 317 aaPredicted RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms