RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
PRDM1-201ENST00000369089 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 GBP2P32456 591 aaPredicted RBP12.36□□□□□ -0.43
PRDM1-201ENST00000369089 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
PRDM1-201ENST00000369089 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
PRDM1-201ENST00000369089 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
PRDM1-201ENST00000369089 SSFA2P28290 1259 aa12.36□□□□□ -0.43
PRDM1-201ENST00000369089 BAG4O95429 457 aaKnown RBP12.35□□□□□ -0.43
PRDM1-201ENST00000369089 BIRC2Q13490 618 aa12.35□□□□□ -0.43
PRDM1-201ENST00000369089 PANK3Q9H999 370 aa12.35□□□□□ -0.43
PRDM1-201ENST00000369089 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
PRDM1-201ENST00000369089 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
PRDM1-201ENST00000369089 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
PRDM1-201ENST00000369089 CAPN2P17655 700 aa12.35□□□□□ -0.43
PRDM1-201ENST00000369089 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
PRDM1-201ENST00000369089 REC8O95072 547 aa12.34□□□□□ -0.43
PRDM1-201ENST00000369089 ZSCAN26Q16670 478 aa12.34□□□□□ -0.43
PRDM1-201ENST00000369089 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
PRDM1-201ENST00000369089 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
PRDM1-201ENST00000369089 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
PRDM1-201ENST00000369089 MEX3CQ5U5Q3 659 aaKnown RBP12.34□□□□□ -0.43
PRDM1-201ENST00000369089 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
PRDM1-201ENST00000369089 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
PRDM1-201ENST00000369089 PNISRQ8TF01 805 aaKnown RBP12.34□□□□□ -0.43
PRDM1-201ENST00000369089 INCENPQ9NQS7 918 aa12.34□□□□□ -0.43
PRDM1-201ENST00000369089 USP47Q96K76 1375 aa12.33□□□□□ -0.44
PRDM1-201ENST00000369089 EZRP15311 586 aaKnown RBP12.33□□□□□ -0.44
PRDM1-201ENST00000369089 ANKRD50Q9ULJ7 1429 aa12.33□□□□□ -0.44
PRDM1-201ENST00000369089 CCDC196A0A1B0GTZ2 297 aa12.33□□□□□ -0.44
PRDM1-201ENST00000369089 SMC2O95347 1197 aa12.33□□□□□ -0.44
PRDM1-201ENST00000369089 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
PRDM1-201ENST00000369089 RBBP5Q15291 538 aaKnown RBP12.33□□□□□ -0.44
PRDM1-201ENST00000369089 RRP12Q5JTH9 1297 aaKnown RBP12.33□□□□□ -0.44
PRDM1-201ENST00000369089 GTF3C6Q969F1 213 aa12.33□□□□□ -0.44
PRDM1-201ENST00000369089 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
PRDM1-201ENST00000369089 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
PRDM1-201ENST00000369089 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 GBP3Q9H0R5 595 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
PRDM1-201ENST00000369089 TERF2Q15554 542 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
PRDM1-201ENST00000369089 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
PRDM1-201ENST00000369089 SLU7O95391 586 aaKnown RBP12.31□□□□□ -0.44
PRDM1-201ENST00000369089 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 SPATS2LQ9NUQ6 558 aaKnown RBP12.31□□□□□ -0.44
PRDM1-201ENST00000369089 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 MAP2K1Q02750 393 aaPredicted RBP12.31□□□□□ -0.44
PRDM1-201ENST00000369089 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
PRDM1-201ENST00000369089 NEMFO60524 1076 aa12.31□□□□□ -0.44
PRDM1-201ENST00000369089 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
PRDM1-201ENST00000369089 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
PRDM1-201ENST00000369089 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
PRDM1-201ENST00000369089 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRDM1-201ENST00000369089 SNAPC4Q5SXM2 1469 aa12.3□□□□□ -0.44
PRDM1-201ENST00000369089 HMMRO75330 724 aa12.3□□□□□ -0.44
PRDM1-201ENST00000369089 NAA25Q14CX7 972 aa12.3□□□□□ -0.44
PRDM1-201ENST00000369089 HNRNPH2P55795 449 aaKnown RBP12.29□□□□□ -0.44
PRDM1-201ENST00000369089 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
PRDM1-201ENST00000369089 ZNF445P59923 1031 aa12.29□□□□□ -0.44
PRDM1-201ENST00000369089 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
PRDM1-201ENST00000369089 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
PRDM1-201ENST00000369089 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
PRDM1-201ENST00000369089 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
PRDM1-201ENST00000369089 CLNS1AP54105 237 aaKnown RBP12.29□□□□□ -0.44
PRDM1-201ENST00000369089 CDC45O75419 566 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 MCM2P49736 904 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 ENOX2Q16206 610 aaKnown RBP12.28□□□□□ -0.44
PRDM1-201ENST00000369089 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 BICD2Q8TD16 824 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
PRDM1-201ENST00000369089 NAP1L1P55209 391 aaKnown RBP12.28□□□□□ -0.44
PRDM1-201ENST00000369089 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 ERO1AQ96HE7 468 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 ARFGAP3Q9NP61 516 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 SYNJ2O15056 1496 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 MCTP2Q6DN12 878 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 AFAP1Q8N556 730 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 SUFUQ9UMX1 484 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 GCKP35557 465 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 E2F4Q16254 413 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 LUZP1Q86V48 1076 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 PIK3R5Q8WYR1 880 aa12.28□□□□□ -0.44
PRDM1-201ENST00000369089 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
PRDM1-201ENST00000369089 MIA2Q96PC5 1412 aa12.27□□□□□ -0.44
PRDM1-201ENST00000369089 NBPF6Q5VWK0 638 aa12.27□□□□□ -0.44
PRDM1-201ENST00000369089 NBPF5PQ86XG9 351 aaPredicted RBP12.27□□□□□ -0.44
PRDM1-201ENST00000369089 NBPF4Q96M43 638 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms