RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ARHGEF10O15013 1369 aa31.59■■■□□ 2.65
SNX3-203ENST00000368979 GCP02774 474 aa31.59■■■□□ 2.65
SNX3-203ENST00000368979 FCHSD2O94868 740 aa31.58■■■□□ 2.65
SNX3-203ENST00000368979 HOXC9P31274 260 aa31.58■■■□□ 2.65
SNX3-203ENST00000368979 PDE3BQ13370 1112 aa31.58■■■□□ 2.65
SNX3-203ENST00000368979 ZNF521Q96K83 1311 aa31.58■■■□□ 2.65
SNX3-203ENST00000368979 ROBO1Q9Y6N7 1651 aa31.57■■■□□ 2.64
SNX3-203ENST00000368979 RSPH6AQ9H0K4 717 aa31.57■■■□□ 2.64
SNX3-203ENST00000368979 PNNQ9H307 717 aaKnown RBP31.56■■■□□ 2.64
SNX3-203ENST00000368979 TCP11L2Q8N4U5 519 aa31.55■■■□□ 2.64
SNX3-203ENST00000368979 NCBP3Q53F19 620 aaKnown RBP31.53■■■□□ 2.64
SNX3-203ENST00000368979 AHDC1Q5TGY3 1603 aaPredicted RBP31.52■■■□□ 2.64
SNX3-203ENST00000368979 ARHGEF25Q86VW2 580 aa31.52■■■□□ 2.64
SNX3-203ENST00000368979 IP6K1Q92551 441 aa31.51■■■□□ 2.63
SNX3-203ENST00000368979 MAPK8IP3Q9UPT6 1336 aa31.5■■■□□ 2.63
SNX3-203ENST00000368979 HMOX1P09601 288 aa31.5■■■□□ 2.63
SNX3-203ENST00000368979 PRKAR2BP31323 418 aa31.49■■■□□ 2.63
SNX3-203ENST00000368979 PHF23Q9BUL5 403 aaPredicted RBP31.49■■■□□ 2.63
SNX3-203ENST00000368979 CCDC27Q2M243 656 aa31.46■■■□□ 2.63
SNX3-203ENST00000368979 ABCA3Q99758 1704 aa31.46■■■□□ 2.63
SNX3-203ENST00000368979 IGSF1Q8N6C5 1336 aa31.46■■■□□ 2.63
SNX3-203ENST00000368979 PLEKHG5O94827 1062 aa31.45■■■□□ 2.63
SNX3-203ENST00000368979 RRP7AQ9Y3A4 280 aaKnown RBP31.45■■■□□ 2.63
SNX3-203ENST00000368979 CDCA7LQ96GN5 454 aa31.44■■■□□ 2.62
SNX3-203ENST00000368979 ABCC6O95255 1503 aa31.44■■■□□ 2.62
SNX3-203ENST00000368979 KDRP35968 1356 aa31.44■■■□□ 2.62
SNX3-203ENST00000368979 TMPOP42166 694 aaKnown RBP31.44■■■□□ 2.62
SNX3-203ENST00000368979 WWC1Q8IX03 1113 aa31.44■■■□□ 2.62
SNX3-203ENST00000368979 SULT6B1Q6IMI4 303 aa31.43■■■□□ 2.62
SNX3-203ENST00000368979 GOLGA2Q08379 1002 aa31.42■■■□□ 2.62
SNX3-203ENST00000368979 AEBP1Q8IUX7 1158 aa31.42■■■□□ 2.62
SNX3-203ENST00000368979 EYA1Q99502 592 aa31.42■■■□□ 2.62
SNX3-203ENST00000368979 NEFMP07197 916 aa31.41■■■□□ 2.62
SNX3-203ENST00000368979 NEUROD2Q15784 382 aa31.41■■■□□ 2.62
SNX3-203ENST00000368979 CABLES1Q8TDN4 633 aa31.41■■■□□ 2.62
SNX3-203ENST00000368979 COL18A1P39060 1754 aa31.41■■■□□ 2.62
SNX3-203ENST00000368979 ZBTB7CA1YPR0 619 aa31.4■■■□□ 2.62
SNX3-203ENST00000368979 CPDO75976 1380 aa31.4■■■□□ 2.62
SNX3-203ENST00000368979 PHACTR3Q96KR7 559 aa31.39■■■□□ 2.62
SNX3-203ENST00000368979 ZC3H6P61129 1189 aaKnown RBP31.39■■■□□ 2.61
SNX3-203ENST00000368979 CAMTA1Q9Y6Y1 1673 aa31.37■■■□□ 2.61
SNX3-203ENST00000368979 RGPD5Q99666 1765 aa31.36■■■□□ 2.61
SNX3-203ENST00000368979 TOM1O60784 492 aa31.36■■■□□ 2.61
SNX3-203ENST00000368979 SLFN5Q08AF3 891 aa31.36■■■□□ 2.61
SNX3-203ENST00000368979 LTV1Q96GA3 475 aaPredicted RBP31.36■■■□□ 2.61
SNX3-203ENST00000368979 NFE2L2Q16236 605 aa31.35■■■□□ 2.61
SNX3-203ENST00000368979 WDR63Q8IWG1 891 aa31.34■■■□□ 2.61
SNX3-203ENST00000368979 TRIM35Q9UPQ4 493 aa31.34■■■□□ 2.61
SNX3-203ENST00000368979 COL22A1Q8NFW1 1626 aaPredicted RBP31.34■■■□□ 2.61
SNX3-203ENST00000368979 RIPK4P57078 832 aa31.34■■■□□ 2.61
SNX3-203ENST00000368979 TRMT2AQ8IZ69 625 aaKnown RBP31.34■■■□□ 2.61
SNX3-203ENST00000368979 AXIN2Q9Y2T1 843 aa31.34■■■□□ 2.61
SNX3-203ENST00000368979 RGPD2P0DJD1 1756 aa31.33■■■□□ 2.61
SNX3-203ENST00000368979 NCAPD2Q15021 1401 aa31.33■■■□□ 2.61
SNX3-203ENST00000368979 DUSP27Q5VZP5 1158 aa31.33■■■□□ 2.61
SNX3-203ENST00000368979 GTF3C3Q9Y5Q9 886 aa31.33■■■□□ 2.61
SNX3-203ENST00000368979 PHLPP1O60346 1717 aa31.32■■■□□ 2.61
SNX3-203ENST00000368979 COL16A1Q07092 1604 aaPredicted RBP31.32■■■□□ 2.6
SNX3-203ENST00000368979 KIAA0232Q92628 1395 aa31.32■■■□□ 2.6
SNX3-203ENST00000368979 E9PSI1 815 aa31.32■■■□□ 2.6
SNX3-203ENST00000368979 LRRC59Q96AG4 307 aaKnown RBP31.32■■■□□ 2.6
SNX3-203ENST00000368979 SPINK5Q9NQ38 1064 aaPredicted RBP31.32■■■□□ 2.6
SNX3-203ENST00000368979 DLG5Q8TDM6 1919 aa31.31■■■□□ 2.6
SNX3-203ENST00000368979 LMO7Q8WWI1 1683 aa31.3■■■□□ 2.6
SNX3-203ENST00000368979 ANKRD24Q8TF21 1146 aa31.3■■■□□ 2.6
SNX3-203ENST00000368979 ERBB3P21860 1342 aa31.29■■■□□ 2.6
SNX3-203ENST00000368979 NBPF6Q5VWK0 638 aa31.29■■■□□ 2.6
SNX3-203ENST00000368979 NBPF4Q96M43 638 aa31.29■■■□□ 2.6
SNX3-203ENST00000368979 FAM208AQ9UK61 1670 aaKnown RBP31.28■■■□□ 2.6
SNX3-203ENST00000368979 SUPT16HQ9Y5B9 1047 aaKnown RBP31.27■■■□□ 2.6
SNX3-203ENST00000368979 UBAP1LF5GYI3 381 aa31.24■■■□□ 2.59
SNX3-203ENST00000368979 CHRNA2Q15822 529 aa31.24■■■□□ 2.59
SNX3-203ENST00000368979 USHBP1Q8N6Y0 703 aa31.24■■■□□ 2.59
SNX3-203ENST00000368979 IL16Q14005 1332 aa31.23■■■□□ 2.59
SNX3-203ENST00000368979 HAP1P54257 671 aaPredicted RBP31.22■■■□□ 2.59
SNX3-203ENST00000368979 PIP4K2BP78356 416 aa31.22■■■□□ 2.59
SNX3-203ENST00000368979 LMOD3Q0VAK6 560 aa31.22■■■□□ 2.59
SNX3-203ENST00000368979 PRDM11Q9NQV5 511 aa31.2■■■□□ 2.59
SNX3-203ENST00000368979 MTHFSDQ2M296 383 aaKnown RBP31.19■■■□□ 2.58
SNX3-203ENST00000368979 RCAN3Q9UKA8 241 aa31.18■■■□□ 2.58
SNX3-203ENST00000368979 RNF123Q5XPI4 1314 aa31.18■■■□□ 2.58
SNX3-203ENST00000368979 GAS2L2Q8NHY3 880 aa31.17■■■□□ 2.58
SNX3-203ENST00000368979 MYH16Q9H6N6 1097 aa31.16■■■□□ 2.58
SNX3-203ENST00000368979 COL5A2P05997 1499 aaPredicted RBP31.15■■■□□ 2.58
SNX3-203ENST00000368979 CALD1Q05682 793 aaKnown RBP31.14■■■□□ 2.57
SNX3-203ENST00000368979 COL14A1Q05707 1796 aaKnown RBP31.12■■■□□ 2.57
SNX3-203ENST00000368979 FANCIQ9NVI1 1328 aa31.11■■■□□ 2.57
SNX3-203ENST00000368979 FAM83GA6ND36 823 aa31.11■■■□□ 2.57
SNX3-203ENST00000368979 NEFLP07196 543 aa31.11■■■□□ 2.57
SNX3-203ENST00000368979 THUMPD2Q9BTF0 503 aaKnown RBP31.11■■■□□ 2.57
SNX3-203ENST00000368979 LRRC37A3O60309 1634 aa31.09■■■□□ 2.57
SNX3-203ENST00000368979 CSB-PGBD3P0DP91 1061 aa31.09■■■□□ 2.57
SNX3-203ENST00000368979 NLRP2Q9NX02 1062 aa31.09■■■□□ 2.57
SNX3-203ENST00000368979 WDR17Q8IZU2 1322 aa31.09■■■□□ 2.57
SNX3-203ENST00000368979 PLEKHG2Q9H7P9 1386 aa31.07■■■□□ 2.56
SNX3-203ENST00000368979 HTATSF1O43719 755 aaKnown RBP31.07■■■□□ 2.56
SNX3-203ENST00000368979 DCTN1Q14203 1278 aa31.07■■■□□ 2.56
SNX3-203ENST00000368979 IFT57Q9NWB7 429 aa31.07■■■□□ 2.56
SNX3-203ENST00000368979 MAP3K5Q99683 1374 aa31.06■■■□□ 2.56
SNX3-203ENST00000368979 ZNF853P0CG23 659 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms