RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 NUTM2DQ5VT03 806 aaPredicted RBP18.31■□□□□ 0.52
SHC1-204ENST00000368450 PLEKHM2Q8IWE5 1019 aa18.31■□□□□ 0.52
SHC1-204ENST00000368450 HMGN5P82970 282 aaKnown RBP18.3■□□□□ 0.52
SHC1-204ENST00000368450 OTUD7AQ8TE49 926 aaPredicted RBP18.3■□□□□ 0.52
SHC1-204ENST00000368450 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
SHC1-204ENST00000368450 ABCA8O94911 1581 aa18.3■□□□□ 0.52
SHC1-204ENST00000368450 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
SHC1-204ENST00000368450 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
SHC1-204ENST00000368450 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
SHC1-204ENST00000368450 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
SHC1-204ENST00000368450 CEP152O94986 1710 aa18.29■□□□□ 0.52
SHC1-204ENST00000368450 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
SHC1-204ENST00000368450 ABCC11Q96J66 1382 aa18.29■□□□□ 0.52
SHC1-204ENST00000368450 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
SHC1-204ENST00000368450 ZNF710Q8N1W2 664 aa18.29■□□□□ 0.52
SHC1-204ENST00000368450 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
SHC1-204ENST00000368450 FGD1P98174 961 aa18.29■□□□□ 0.52
SHC1-204ENST00000368450 SMARCA5O60264 1052 aaPredicted RBP18.28■□□□□ 0.52
SHC1-204ENST00000368450 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
SHC1-204ENST00000368450 BBXQ8WY36 941 aaPredicted RBP18.28■□□□□ 0.52
SHC1-204ENST00000368450 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
SHC1-204ENST00000368450 TTC22Q5TAA0 569 aa18.27■□□□□ 0.52
SHC1-204ENST00000368450 TSPYL6Q8N831 410 aa18.27■□□□□ 0.52
SHC1-204ENST00000368450 PRIMPOLQ96LW4 560 aa18.27■□□□□ 0.52
SHC1-204ENST00000368450 PDCL2Q8N4E4 241 aa18.27■□□□□ 0.52
SHC1-204ENST00000368450 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
SHC1-204ENST00000368450 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.52
SHC1-204ENST00000368450 SHPRHQ149N8 1683 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
SHC1-204ENST00000368450 CD109Q6YHK3 1445 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 NOS1P29475 1434 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 SDSP20132 328 aa18.26■□□□□ 0.51
SHC1-204ENST00000368450 ADCY5O95622 1261 aa18.25■□□□□ 0.51
SHC1-204ENST00000368450 CHAF1AQ13111 956 aaPredicted RBP18.25■□□□□ 0.51
SHC1-204ENST00000368450 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
SHC1-204ENST00000368450 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
SHC1-204ENST00000368450 BCL2L12Q9HB09 334 aa18.24■□□□□ 0.51
SHC1-204ENST00000368450 DIAPH1O60610 1272 aaKnown RBP18.24■□□□□ 0.51
SHC1-204ENST00000368450 REC8O95072 547 aa18.24■□□□□ 0.51
SHC1-204ENST00000368450 SRPK2P78362 688 aaKnown RBP18.24■□□□□ 0.51
SHC1-204ENST00000368450 TMX3Q96JJ7 454 aa18.24■□□□□ 0.51
SHC1-204ENST00000368450 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
SHC1-204ENST00000368450 GTPBP4Q9BZE4 634 aaKnown RBP18.24■□□□□ 0.51
SHC1-204ENST00000368450 U2AF2P26368 475 aaKnown RBP eCLIP18.24■□□□□ 0.511e-9■■■■■ 30.2
SHC1-204ENST00000368450 ZNF771Q7L3S4 317 aaPredicted RBP18.24■□□□□ 0.51
SHC1-204ENST00000368450 HMOX1P09601 288 aa18.23■□□□□ 0.51
SHC1-204ENST00000368450 PHF14O94880 888 aa18.23■□□□□ 0.51
SHC1-204ENST00000368450 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
SHC1-204ENST00000368450 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
SHC1-204ENST00000368450 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
SHC1-204ENST00000368450 SPC24Q8NBT2 197 aa18.22■□□□□ 0.51
SHC1-204ENST00000368450 VAMP4O75379 141 aa18.21■□□□□ 0.51
SHC1-204ENST00000368450 IL16Q14005 1332 aa18.21■□□□□ 0.51
SHC1-204ENST00000368450 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
SHC1-204ENST00000368450 FBLN1P23142 703 aa18.21■□□□□ 0.51
SHC1-204ENST00000368450 STK26Q9P289 416 aa18.21■□□□□ 0.51
SHC1-204ENST00000368450 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
SHC1-204ENST00000368450 ERC2O15083 957 aa18.19■□□□□ 0.5
SHC1-204ENST00000368450 KIF20AO95235 890 aa18.19■□□□□ 0.5
SHC1-204ENST00000368450 CGNQ9P2M7 1197 aaKnown RBP18.19■□□□□ 0.5
SHC1-204ENST00000368450 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
SHC1-204ENST00000368450 LETM1O95202 739 aaPredicted RBP18.19■□□□□ 0.5
SHC1-204ENST00000368450 USP48Q86UV5 1035 aa18.19■□□□□ 0.5
SHC1-204ENST00000368450 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
SHC1-204ENST00000368450 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
SHC1-204ENST00000368450 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
SHC1-204ENST00000368450 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
SHC1-204ENST00000368450 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
SHC1-204ENST00000368450 RIOK3O14730 519 aaKnown RBP18.18■□□□□ 0.5
SHC1-204ENST00000368450 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
SHC1-204ENST00000368450 CLTCL1P53675 1640 aa18.18■□□□□ 0.5
SHC1-204ENST00000368450 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
SHC1-204ENST00000368450 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
SHC1-204ENST00000368450 BRD1O95696 1058 aa18.17■□□□□ 0.5
SHC1-204ENST00000368450 DIAPH3Q9NSV4 1193 aa18.17■□□□□ 0.5
SHC1-204ENST00000368450 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
SHC1-204ENST00000368450 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
SHC1-204ENST00000368450 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
SHC1-204ENST00000368450 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
SHC1-204ENST00000368450 TRPM2O94759 1503 aa18.15■□□□□ 0.5
SHC1-204ENST00000368450 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.5
SHC1-204ENST00000368450 SHROOM2Q13796 1616 aa18.14■□□□□ 0.5
SHC1-204ENST00000368450 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
SHC1-204ENST00000368450 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
SHC1-204ENST00000368450 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
SHC1-204ENST00000368450 RILPL2Q969X0 211 aa18.14■□□□□ 0.49
SHC1-204ENST00000368450 TRIM6-TRIM34B2RNG4 842 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 MBIPQ9NS73 344 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 ARHGAP31Q2M1Z3 1444 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 FIBPO43427 364 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 DTNBO60941 627 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 MCCP23508 829 aa18.13■□□□□ 0.49
SHC1-204ENST00000368450 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
SHC1-204ENST00000368450 GTF2F1P35269 517 aaKnown RBP eCLIP18.12■□□□□ 0.49
SHC1-204ENST00000368450 GNAI1P63096 354 aa18.12■□□□□ 0.49
SHC1-204ENST00000368450 UVSSAQ2YD98 709 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms