RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ABCC6O95255 1503 aa26.51■■□□□ 1.83
CKS1B-203ENST00000368439 CDCA8Q53HL2 280 aa26.51■■□□□ 1.83
CKS1B-203ENST00000368439 BARGINQ6ZT62 677 aa26.51■■□□□ 1.83
CKS1B-203ENST00000368439 CRB1P82279 1406 aa26.5■■□□□ 1.83
CKS1B-203ENST00000368439 A0A0G2JS52 829 aa26.5■■□□□ 1.83
CKS1B-203ENST00000368439 MYT1Q01538 1121 aa26.5■■□□□ 1.83
CKS1B-203ENST00000368439 CCDC125Q86Z20 511 aa26.49■■□□□ 1.83
CKS1B-203ENST00000368439 USP35Q9P2H5 1018 aa26.49■■□□□ 1.83
CKS1B-203ENST00000368439 TCP11L2Q8N4U5 519 aa26.48■■□□□ 1.83
CKS1B-203ENST00000368439 BLMP54132 1417 aaPredicted RBP26.47■■□□□ 1.83
CKS1B-203ENST00000368439 PARP4Q9UKK3 1724 aaKnown RBP26.46■■□□□ 1.83
CKS1B-203ENST00000368439 THRAP3Q9Y2W1 955 aaKnown RBP26.46■■□□□ 1.83
CKS1B-203ENST00000368439 WNK3Q9BYP7 1800 aa26.46■■□□□ 1.83
CKS1B-203ENST00000368439 WDR17Q8IZU2 1322 aa26.45■■□□□ 1.83
CKS1B-203ENST00000368439 HSPA5P11021 654 aaKnown RBP26.45■■□□□ 1.82
CKS1B-203ENST00000368439 EIF4G2P78344 907 aaKnown RBP eCLIP26.45■■□□□ 1.82
CKS1B-203ENST00000368439 FAM182BQ5T319 152 aa26.42■■□□□ 1.82
CKS1B-203ENST00000368439 KIF20BQ96Q89 1820 aa26.42■■□□□ 1.82
CKS1B-203ENST00000368439 FYB1O15117 783 aa26.4■■□□□ 1.82
CKS1B-203ENST00000368439 TOM1L2Q6ZVM7 507 aa26.4■■□□□ 1.82
CKS1B-203ENST00000368439 CARD14Q9BXL6 1004 aa26.4■■□□□ 1.82
CKS1B-203ENST00000368439 COG3Q96JB2 828 aa26.39■■□□□ 1.82
CKS1B-203ENST00000368439 RGPD1P0DJD0 1748 aa26.38■■□□□ 1.81
CKS1B-203ENST00000368439 LRRC37A3O60309 1634 aa26.38■■□□□ 1.81
CKS1B-203ENST00000368439 CARD10Q9BWT7 1032 aa26.37■■□□□ 1.81
CKS1B-203ENST00000368439 TNS1Q9HBL0 1735 aaKnown RBP26.36■■□□□ 1.81
CKS1B-203ENST00000368439 ERBB3P21860 1342 aa26.36■■□□□ 1.81
CKS1B-203ENST00000368439 GGNBP2Q9H3C7 697 aa26.35■■□□□ 1.81
CKS1B-203ENST00000368439 DISP2A7MBM2 1401 aa26.34■■□□□ 1.81
CKS1B-203ENST00000368439 NSD3Q9BZ95 1437 aa26.34■■□□□ 1.81
CKS1B-203ENST00000368439 FBLN1P23142 703 aa26.34■■□□□ 1.81
CKS1B-203ENST00000368439 DEFB132Q7Z7B7 95 aa26.34■■□□□ 1.81
CKS1B-203ENST00000368439 CSB-PGBD3P0DP91 1061 aa26.33■■□□□ 1.81
CKS1B-203ENST00000368439 PEAK1Q9H792 1746 aa26.33■■□□□ 1.81
CKS1B-203ENST00000368439 PDE3BQ13370 1112 aa26.32■■□□□ 1.8
CKS1B-203ENST00000368439 IP6K1Q92551 441 aa26.32■■□□□ 1.8
CKS1B-203ENST00000368439 MAP3K19Q56UN5 1328 aa26.32■■□□□ 1.8
CKS1B-203ENST00000368439 C11orf95C9JLR9 678 aaPredicted RBP26.31■■□□□ 1.8
CKS1B-203ENST00000368439 FAM196AQ6ZSG2 479 aa26.31■■□□□ 1.8
CKS1B-203ENST00000368439 CCDC7Q96M83 1385 aa26.31■■□□□ 1.8
CKS1B-203ENST00000368439 SF3B2Q13435 895 aaKnown RBP26.3■■□□□ 1.8
CKS1B-203ENST00000368439 ANKRD24Q8TF21 1146 aa26.3■■□□□ 1.8
CKS1B-203ENST00000368439 FAM208AQ9UK61 1670 aaKnown RBP26.28■■□□□ 1.8
CKS1B-203ENST00000368439 CDCA7Q9BWT1 371 aaPredicted RBP26.28■■□□□ 1.8
CKS1B-203ENST00000368439 HOXC9P31274 260 aa26.27■■□□□ 1.8
CKS1B-203ENST00000368439 DDB1Q16531 1140 aa26.27■■□□□ 1.8
CKS1B-203ENST00000368439 POLR3GLQ9BT43 218 aa26.27■■□□□ 1.8
CKS1B-203ENST00000368439 SBF2Q86WG5 1849 aa26.27■■□□□ 1.8
CKS1B-203ENST00000368439 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
CKS1B-203ENST00000368439 RTL1A6NKG5 1358 aa26.24■■□□□ 1.79
CKS1B-203ENST00000368439 TRIM37O94972 964 aa26.24■■□□□ 1.79
CKS1B-203ENST00000368439 RRS1Q15050 365 aaKnown RBP26.24■■□□□ 1.79
CKS1B-203ENST00000368439 NLRP2Q9NX02 1062 aa26.24■■□□□ 1.79
CKS1B-203ENST00000368439 ANKRD26Q9UPS8 1709 aa26.23■■□□□ 1.79
CKS1B-203ENST00000368439 BAG6P46379 1132 aa26.23■■□□□ 1.79
CKS1B-203ENST00000368439 OVOS2A0A0G2JMS6 1433 aa26.22■■□□□ 1.79
CKS1B-203ENST00000368439 AMPHP49418 695 aa26.22■■□□□ 1.79
CKS1B-203ENST00000368439 MARCH10Q8NA82 808 aaPredicted RBP26.22■■□□□ 1.79
CKS1B-203ENST00000368439 CGNL1Q0VF96 1302 aa26.2■■□□□ 1.79
CKS1B-203ENST00000368439 EN1Q05925 392 aaPredicted RBP26.2■■□□□ 1.78
CKS1B-203ENST00000368439 LTV1Q96GA3 475 aaPredicted RBP26.2■■□□□ 1.78
CKS1B-203ENST00000368439 PANK3Q9H999 370 aa26.2■■□□□ 1.78
CKS1B-203ENST00000368439 BCL9O00512 1426 aa26.2■■□□□ 1.78
CKS1B-203ENST00000368439 TNS2Q63HR2 1409 aa26.2■■□□□ 1.78
CKS1B-203ENST00000368439 MAP2P11137 1827 aaKnown RBP26.18■■□□□ 1.78
CKS1B-203ENST00000368439 EXOC5O00471 708 aa26.17■■□□□ 1.78
CKS1B-203ENST00000368439 IL2RBP14784 551 aa26.17■■□□□ 1.78
CKS1B-203ENST00000368439 KIF24Q5T7B8 1368 aa26.17■■□□□ 1.78
CKS1B-203ENST00000368439 KIF7Q2M1P5 1343 aa26.16■■□□□ 1.78
CKS1B-203ENST00000368439 CAMKK2Q96RR4 588 aa26.15■■□□□ 1.78
CKS1B-203ENST00000368439 INSRP06213 1382 aa26.15■■□□□ 1.78
CKS1B-203ENST00000368439 FLT4P35916 1363 aa26.15■■□□□ 1.78
CKS1B-203ENST00000368439 APBA3O96018 575 aa26.14■■□□□ 1.78
CKS1B-203ENST00000368439 HSP90AB2PQ58FF8 381 aa26.14■■□□□ 1.78
CKS1B-203ENST00000368439 RREB1Q92766 1687 aa26.14■■□□□ 1.78
CKS1B-203ENST00000368439 EZH2Q15910 746 aaKnown RBP26.13■■□□□ 1.77
CKS1B-203ENST00000368439 EMILIN1Q9Y6C2 1016 aa26.13■■□□□ 1.77
CKS1B-203ENST00000368439 NBPF6Q5VWK0 638 aa26.11■■□□□ 1.77
CKS1B-203ENST00000368439 PTF1AQ7RTS3 328 aa26.11■■□□□ 1.77
CKS1B-203ENST00000368439 NBPF4Q96M43 638 aa26.11■■□□□ 1.77
CKS1B-203ENST00000368439 SHANK3Q9BYB0 1731 aa26.1■■□□□ 1.77
CKS1B-203ENST00000368439 RGPD3A6NKT7 1758 aaPredicted RBP26.1■■□□□ 1.77
CKS1B-203ENST00000368439 RGPD4Q7Z3J3 1758 aa26.1■■□□□ 1.77
CKS1B-203ENST00000368439 PARD3Q8TEW0 1356 aa26.09■■□□□ 1.77
CKS1B-203ENST00000368439 NUP188Q5SRE5 1749 aa26.08■■□□□ 1.77
CKS1B-203ENST00000368439 SMG6Q86US8 1419 aaKnown RBP26.08■■□□□ 1.77
CKS1B-203ENST00000368439 BCL11BQ9C0K0 894 aaPredicted RBP26.08■■□□□ 1.77
CKS1B-203ENST00000368439 POLKQ9UBT6 870 aa26.08■■□□□ 1.77
CKS1B-203ENST00000368439 MEGF6O75095 1541 aa26.08■■□□□ 1.77
CKS1B-203ENST00000368439 NSD2O96028 1365 aa26.07■■□□□ 1.76
CKS1B-203ENST00000368439 NHSQ6T4R5 1651 aa26.07■■□□□ 1.76
CKS1B-203ENST00000368439 WASHC2AQ641Q2 1341 aa26.06■■□□□ 1.76
CKS1B-203ENST00000368439 USHBP1Q8N6Y0 703 aa26.04■■□□□ 1.76
CKS1B-203ENST00000368439 NCAPD2Q15021 1401 aa26.04■■□□□ 1.76
CKS1B-203ENST00000368439 PLSCR1O15162 318 aa26.02■■□□□ 1.76
CKS1B-203ENST00000368439 TNNT2P45379 298 aaPredicted RBP26.02■■□□□ 1.76
CKS1B-203ENST00000368439 PPM1GO15355 546 aaPredicted RBP26.01■■□□□ 1.75
CKS1B-203ENST00000368439 KCNQ2O43526 872 aa26.01■■□□□ 1.75
CKS1B-203ENST00000368439 AMER1Q5JTC6 1135 aaPredicted RBP26.01■■□□□ 1.75
CKS1B-203ENST00000368439 SRCAPQ6ZRS2 3230 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms