RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KTN1Q86UP2 1357 aaKnown RBP22.84■■□□□ 1.25
CKS1B-202ENST00000368436 NUP188Q5SRE5 1749 aa22.83■■□□□ 1.25
CKS1B-202ENST00000368436 SBF2Q86WG5 1849 aa22.83■■□□□ 1.25
CKS1B-202ENST00000368436 C11orf95C9JLR9 678 aaPredicted RBP22.83■■□□□ 1.25
CKS1B-202ENST00000368436 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
CKS1B-202ENST00000368436 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
CKS1B-202ENST00000368436 CARD11Q9BXL7 1154 aa22.82■■□□□ 1.24
CKS1B-202ENST00000368436 NFAT5O94916 1531 aa22.82■■□□□ 1.24
CKS1B-202ENST00000368436 USP54Q70EL1 1684 aa22.81■■□□□ 1.24
CKS1B-202ENST00000368436 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
CKS1B-202ENST00000368436 OVOS2A0A0J9YW53 1432 aa22.8■■□□□ 1.24
CKS1B-202ENST00000368436 OVOS2Q6IE36 1432 aa22.8■■□□□ 1.24
CKS1B-202ENST00000368436 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
CKS1B-202ENST00000368436 USP31Q70CQ4 1352 aa22.78■■□□□ 1.24
CKS1B-202ENST00000368436 ABCC6O95255 1503 aa22.78■■□□□ 1.24
CKS1B-202ENST00000368436 DDB1Q16531 1140 aa22.78■■□□□ 1.24
CKS1B-202ENST00000368436 TONSLQ96HA7 1378 aa22.77■■□□□ 1.24
CKS1B-202ENST00000368436 RGPD3A6NKT7 1758 aaPredicted RBP22.77■■□□□ 1.24
CKS1B-202ENST00000368436 RGPD4Q7Z3J3 1758 aa22.77■■□□□ 1.24
CKS1B-202ENST00000368436 CDCA7Q9BWT1 371 aaPredicted RBP22.77■■□□□ 1.24
CKS1B-202ENST00000368436 CARD10Q9BWT7 1032 aa22.77■■□□□ 1.24
CKS1B-202ENST00000368436 SOX12O15370 315 aa22.76■■□□□ 1.23
CKS1B-202ENST00000368436 BCL9O00512 1426 aa22.74■■□□□ 1.23
CKS1B-202ENST00000368436 NBPF14Q5TI25 921 aa22.73■■□□□ 1.23
CKS1B-202ENST00000368436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
CKS1B-202ENST00000368436 PUS7Q96PZ0 661 aaKnown RBP22.73■■□□□ 1.23
CKS1B-202ENST00000368436 LTN1O94822 1766 aa22.73■■□□□ 1.23
CKS1B-202ENST00000368436 PLSCR1O15162 318 aa22.72■■□□□ 1.23
CKS1B-202ENST00000368436 CSB-PGBD3P0DP91 1061 aa22.72■■□□□ 1.23
CKS1B-202ENST00000368436 MARCH10Q8NA82 808 aaPredicted RBP22.72■■□□□ 1.23
CKS1B-202ENST00000368436 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
CKS1B-202ENST00000368436 HDGFL2Q7Z4V5 671 aaPredicted RBP22.71■■□□□ 1.23
CKS1B-202ENST00000368436 NME9Q86XW9 330 aa22.71■■□□□ 1.23
CKS1B-202ENST00000368436 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
CKS1B-202ENST00000368436 BCL11BQ9C0K0 894 aaPredicted RBP22.71■■□□□ 1.23
CKS1B-202ENST00000368436 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
CKS1B-202ENST00000368436 EDC4Q6P2E9 1401 aaKnown RBP22.69■■□□□ 1.22
CKS1B-202ENST00000368436 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
CKS1B-202ENST00000368436 EXOC5O00471 708 aa22.67■■□□□ 1.22
CKS1B-202ENST00000368436 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
CKS1B-202ENST00000368436 A0A1W2PP64 1363 aa22.66■■□□□ 1.22
CKS1B-202ENST00000368436 TESK2Q96S53 571 aa22.66■■□□□ 1.22
CKS1B-202ENST00000368436 ERBB3P21860 1342 aa22.65■■□□□ 1.22
CKS1B-202ENST00000368436 TNS2Q63HR2 1409 aa22.64■■□□□ 1.21
CKS1B-202ENST00000368436 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
CKS1B-202ENST00000368436 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
CKS1B-202ENST00000368436 PROM2Q8N271 834 aa22.62■■□□□ 1.21
CKS1B-202ENST00000368436 SLC24A1O60721 1099 aa22.61■■□□□ 1.21
CKS1B-202ENST00000368436 ANKRD24Q8TF21 1146 aa22.6■■□□□ 1.21
CKS1B-202ENST00000368436 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
CKS1B-202ENST00000368436 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
CKS1B-202ENST00000368436 CASZ1Q86V15 1759 aa22.59■■□□□ 1.21
CKS1B-202ENST00000368436 TRIM26Q12899 539 aaPredicted RBP22.59■■□□□ 1.21
CKS1B-202ENST00000368436 KCNQ2O43526 872 aa22.58■■□□□ 1.21
CKS1B-202ENST00000368436 SPON1Q9HCB6 807 aa22.58■■□□□ 1.21
CKS1B-202ENST00000368436 ANO8Q9HCE9 1232 aaPredicted RBP22.58■■□□□ 1.21
CKS1B-202ENST00000368436 IL2RBP14784 551 aa22.57■■□□□ 1.2
CKS1B-202ENST00000368436 IP6K1Q92551 441 aa22.57■■□□□ 1.2
CKS1B-202ENST00000368436 FAM208AQ9UK61 1670 aaKnown RBP22.57■■□□□ 1.2
CKS1B-202ENST00000368436 TXNRD1Q16881 649 aa22.55■■□□□ 1.2
CKS1B-202ENST00000368436 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
CKS1B-202ENST00000368436 COG3Q96JB2 828 aa22.52■■□□□ 1.2
CKS1B-202ENST00000368436 BTAF1O14981 1849 aa22.52■■□□□ 1.2
CKS1B-202ENST00000368436 ACSBG1Q96GR2 724 aa22.5■■□□□ 1.19
CKS1B-202ENST00000368436 PDGFDQ9GZP0 370 aaPredicted RBP22.5■■□□□ 1.19
CKS1B-202ENST00000368436 MAP3K19Q56UN5 1328 aa22.5■■□□□ 1.19
CKS1B-202ENST00000368436 STK32BQ9NY57 414 aa22.49■■□□□ 1.19
CKS1B-202ENST00000368436 PPP1R1BQ9UD71 204 aaPredicted RBP22.49■■□□□ 1.19
CKS1B-202ENST00000368436 USP47Q96K76 1375 aa22.49■■□□□ 1.19
CKS1B-202ENST00000368436 RGPD2P0DJD1 1756 aa22.48■■□□□ 1.19
CKS1B-202ENST00000368436 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
CKS1B-202ENST00000368436 HOXC9P31274 260 aa22.48■■□□□ 1.19
CKS1B-202ENST00000368436 TMF1P82094 1093 aa22.48■■□□□ 1.19
CKS1B-202ENST00000368436 SLC15A2Q16348 729 aa22.48■■□□□ 1.19
CKS1B-202ENST00000368436 FBLN1P23142 703 aa22.47■■□□□ 1.19
CKS1B-202ENST00000368436 LTV1Q96GA3 475 aaPredicted RBP22.47■■□□□ 1.19
CKS1B-202ENST00000368436 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
CKS1B-202ENST00000368436 FYB1O15117 783 aa22.45■■□□□ 1.18
CKS1B-202ENST00000368436 AMPHP49418 695 aa22.44■■□□□ 1.18
CKS1B-202ENST00000368436 SHANK3Q9BYB0 1731 aa22.43■■□□□ 1.18
CKS1B-202ENST00000368436 RTL1A6NKG5 1358 aa22.43■■□□□ 1.18
CKS1B-202ENST00000368436 ZBTB7AO95365 584 aa22.43■■□□□ 1.18
CKS1B-202ENST00000368436 PTGER2P43116 358 aa22.43■■□□□ 1.18
CKS1B-202ENST00000368436 KIF20BQ96Q89 1820 aa22.43■■□□□ 1.18
CKS1B-202ENST00000368436 MYOM1P52179 1685 aa22.42■■□□□ 1.18
CKS1B-202ENST00000368436 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
CKS1B-202ENST00000368436 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
CKS1B-202ENST00000368436 GGNBP2Q9H3C7 697 aa22.41■■□□□ 1.18
CKS1B-202ENST00000368436 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
CKS1B-202ENST00000368436 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
CKS1B-202ENST00000368436 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
CKS1B-202ENST00000368436 DOT1LQ8TEK3 1739 aa22.39■■□□□ 1.17
CKS1B-202ENST00000368436 MTFR1LQ9H019 292 aa22.38■■□□□ 1.17
CKS1B-202ENST00000368436 LRRC4BQ9NT99 713 aa22.38■■□□□ 1.17
CKS1B-202ENST00000368436 MEGF6O75095 1541 aa22.37■■□□□ 1.17
CKS1B-202ENST00000368436 ZCRB1Q8TBF4 217 aaKnown RBP22.37■■□□□ 1.17
CKS1B-202ENST00000368436 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
CKS1B-202ENST00000368436 NBPF6Q5VWK0 638 aa22.36■■□□□ 1.17
CKS1B-202ENST00000368436 NBPF4Q96M43 638 aa22.36■■□□□ 1.17
CKS1B-202ENST00000368436 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms