RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 MTHFSP49914 203 aa34.52■■■■□ 3.12
EFNA1-202ENST00000368407 CABLES1Q8TDN4 633 aa34.51■■■■□ 3.12
EFNA1-202ENST00000368407 LRRC59Q96AG4 307 aaKnown RBP34.51■■■■□ 3.12
EFNA1-202ENST00000368407 POLKQ9UBT6 870 aa34.51■■■■□ 3.12
EFNA1-202ENST00000368407 PHLPP1O60346 1717 aa34.51■■■■□ 3.11
EFNA1-202ENST00000368407 MED1Q15648 1581 aaPredicted RBP34.5■■■■□ 3.11
EFNA1-202ENST00000368407 EMILIN1Q9Y6C2 1016 aa34.5■■■■□ 3.11
EFNA1-202ENST00000368407 COL16A1Q07092 1604 aaPredicted RBP34.49■■■■□ 3.11
EFNA1-202ENST00000368407 GCP02774 474 aa34.48■■■■□ 3.11
EFNA1-202ENST00000368407 SLIT3O75094 1523 aa34.48■■■■□ 3.11
EFNA1-202ENST00000368407 PPM1GO15355 546 aaPredicted RBP34.46■■■■□ 3.11
EFNA1-202ENST00000368407 KCNH5Q8NCM2 988 aa34.45■■■■□ 3.11
EFNA1-202ENST00000368407 NFAT5O94916 1531 aa34.44■■■■□ 3.1
EFNA1-202ENST00000368407 MAP3K19Q56UN5 1328 aa34.44■■■■□ 3.1
EFNA1-202ENST00000368407 MAP2P11137 1827 aaKnown RBP34.42■■■■□ 3.1
EFNA1-202ENST00000368407 PNPLA6Q8IY17 1366 aa34.41■■■■□ 3.1
EFNA1-202ENST00000368407 DDRGK1Q96HY6 314 aa34.4■■■■□ 3.1
EFNA1-202ENST00000368407 CRYBG1Q9Y4K1 1723 aa34.39■■■■□ 3.1
EFNA1-202ENST00000368407 PHRF1Q9P1Y6 1649 aaKnown RBP34.39■■■■□ 3.1
EFNA1-202ENST00000368407 ZC3H6P61129 1189 aaKnown RBP34.38■■■■□ 3.09
EFNA1-202ENST00000368407 ZBTB7CA1YPR0 619 aa34.36■■■■□ 3.09
EFNA1-202ENST00000368407 HSPA1LP34931 641 aa34.36■■■■□ 3.09
EFNA1-202ENST00000368407 PEAK1Q9H792 1746 aa34.35■■■■□ 3.09
EFNA1-202ENST00000368407 ARHGEF25Q86VW2 580 aa34.35■■■■□ 3.09
EFNA1-202ENST00000368407 AMPHP49418 695 aa34.34■■■■□ 3.09
EFNA1-202ENST00000368407 CFAP53Q96M91 514 aa34.34■■■■□ 3.09
EFNA1-202ENST00000368407 CDK12Q9NYV4 1490 aaPredicted RBP34.33■■■■□ 3.09
EFNA1-202ENST00000368407 HAP1P54257 671 aaPredicted RBP34.32■■■■□ 3.08
EFNA1-202ENST00000368407 COL3A1P02461 1466 aaPredicted RBP34.32■■■■□ 3.08
EFNA1-202ENST00000368407 HSP90AB2PQ58FF8 381 aa34.32■■■■□ 3.08
EFNA1-202ENST00000368407 CDCA7LQ96GN5 454 aa34.32■■■■□ 3.08
EFNA1-202ENST00000368407 COL22A1Q8NFW1 1626 aaPredicted RBP34.3■■■■□ 3.08
EFNA1-202ENST00000368407 ABCA3Q99758 1704 aa34.3■■■■□ 3.08
EFNA1-202ENST00000368407 FLT4P35916 1363 aa34.3■■■■□ 3.08
EFNA1-202ENST00000368407 HOXC9P31274 260 aa34.3■■■■□ 3.08
EFNA1-202ENST00000368407 LTN1O94822 1766 aa34.29■■■■□ 3.08
EFNA1-202ENST00000368407 KIAA0232Q92628 1395 aa34.28■■■■□ 3.08
EFNA1-202ENST00000368407 KDM2BQ8NHM5 1336 aa34.28■■■■□ 3.08
EFNA1-202ENST00000368407 KIF24Q5T7B8 1368 aa34.26■■■■□ 3.07
EFNA1-202ENST00000368407 SENP3-EIF4A1A0A087X0R7 540 aa34.26■■■■□ 3.07
EFNA1-202ENST00000368407 IP6K1Q92551 441 aa34.26■■■■□ 3.07
EFNA1-202ENST00000368407 CRBNQ96SW2 442 aa34.26■■■■□ 3.07
EFNA1-202ENST00000368407 CPDO75976 1380 aa34.25■■■■□ 3.07
EFNA1-202ENST00000368407 JCADQ9P266 1359 aa34.25■■■■□ 3.07
EFNA1-202ENST00000368407 CHRNA2Q15822 529 aa34.25■■■■□ 3.07
EFNA1-202ENST00000368407 RTL1A6NKG5 1358 aa34.25■■■■□ 3.07
EFNA1-202ENST00000368407 DIAPH1O60610 1272 aaKnown RBP34.24■■■■□ 3.07
EFNA1-202ENST00000368407 CENPQQ7L2Z9 268 aaPredicted RBP34.23■■■■□ 3.07
EFNA1-202ENST00000368407 AXIN2Q9Y2T1 843 aa34.23■■■■□ 3.07
EFNA1-202ENST00000368407 ZNF521Q96K83 1311 aa34.23■■■■□ 3.07
EFNA1-202ENST00000368407 EIF4A2Q14240 407 aaKnown RBP34.22■■■■□ 3.07
EFNA1-202ENST00000368407 IL13P35225 146 aa34.21■■■■□ 3.07
EFNA1-202ENST00000368407 NPM2Q86SE8 214 aaKnown RBP34.21■■■■□ 3.07
EFNA1-202ENST00000368407 PRDM11Q9NQV5 511 aa34.21■■■■□ 3.07
EFNA1-202ENST00000368407 SHPRHQ149N8 1683 aa34.21■■■■□ 3.07
EFNA1-202ENST00000368407 NUTM2BA6NNL0 878 aaPredicted RBP34.2■■■■□ 3.06
EFNA1-202ENST00000368407 NUTM2EB1AL46 878 aaPredicted RBP34.2■■■■□ 3.06
EFNA1-202ENST00000368407 WDR43Q15061 677 aaKnown RBP eCLIP34.2■■■■□ 3.06
EFNA1-202ENST00000368407 NUTM2AQ8IVF1 878 aaPredicted RBP34.2■■■■□ 3.06
EFNA1-202ENST00000368407 ADAMTS8Q9UP79 889 aa34.18■■■■□ 3.06
EFNA1-202ENST00000368407 SALL2Q9Y467 1007 aaPredicted RBP34.18■■■■□ 3.06
EFNA1-202ENST00000368407 LTV1Q96GA3 475 aaPredicted RBP34.18■■■■□ 3.06
EFNA1-202ENST00000368407 U2SURPO15042 1029 aaKnown RBP34.17■■■■□ 3.06
EFNA1-202ENST00000368407 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.16■■■■□ 3.06
EFNA1-202ENST00000368407 FAM83GA6ND36 823 aa34.16■■■■□ 3.06
EFNA1-202ENST00000368407 NEFMP07197 916 aa34.16■■■■□ 3.06
EFNA1-202ENST00000368407 ADAMTS2O95450 1211 aa34.15■■■■□ 3.06
EFNA1-202ENST00000368407 COL18A1P39060 1754 aa34.15■■■■□ 3.06
EFNA1-202ENST00000368407 U2AF1L5P0DN76 240 aaPredicted RBP34.13■■■■□ 3.05
EFNA1-202ENST00000368407 U2AF1Q01081 240 aaKnown RBP eCLIP34.13■■■■□ 3.052e-7■□□□□ 10
EFNA1-202ENST00000368407 DUSP27Q5VZP5 1158 aa34.13■■■■□ 3.05
EFNA1-202ENST00000368407 PLIN1O60240 522 aa34.12■■■■□ 3.05
EFNA1-202ENST00000368407 FBXO41Q8TF61 875 aa34.11■■■■□ 3.05
EFNA1-202ENST00000368407 NGEFQ8N5V2 710 aa34.1■■■■□ 3.05
EFNA1-202ENST00000368407 ANKRD24Q8TF21 1146 aa34.1■■■■□ 3.05
EFNA1-202ENST00000368407 SPATA31A6Q5VVP1 1343 aa34.09■■■■□ 3.05
EFNA1-202ENST00000368407 VIRMAQ69YN4 1812 aaKnown RBP34.08■■■■□ 3.05
EFNA1-202ENST00000368407 ABCC6O95255 1503 aa34.08■■■■□ 3.05
EFNA1-202ENST00000368407 CAMTA1Q9Y6Y1 1673 aa34.08■■■■□ 3.05
EFNA1-202ENST00000368407 RGPD5Q99666 1765 aa34.08■■■■□ 3.05
EFNA1-202ENST00000368407 ERBB3P21860 1342 aa34.07■■■■□ 3.04
EFNA1-202ENST00000368407 LMO7Q8WWI1 1683 aa34.07■■■■□ 3.04
EFNA1-202ENST00000368407 EYA1Q99502 592 aa34.07■■■■□ 3.04
EFNA1-202ENST00000368407 GOLGA2Q08379 1002 aa34.06■■■■□ 3.04
EFNA1-202ENST00000368407 HMOX1P09601 288 aa34.06■■■■□ 3.04
EFNA1-202ENST00000368407 TRMT2AQ8IZ69 625 aaKnown RBP34.06■■■■□ 3.04
EFNA1-202ENST00000368407 FAM161AQ3B820 660 aa34.05■■■■□ 3.04
EFNA1-202ENST00000368407 LRP6O75581 1613 aa34.04■■■■□ 3.04
EFNA1-202ENST00000368407 CCDC146Q8IYE0 955 aa34.04■■■■□ 3.04
EFNA1-202ENST00000368407 AEBP1Q8IUX7 1158 aa34.03■■■■□ 3.04
EFNA1-202ENST00000368407 LAS1LQ9Y4W2 734 aaKnown RBP34.03■■■■□ 3.04
EFNA1-202ENST00000368407 NBPF6Q5VWK0 638 aa34.02■■■■□ 3.04
EFNA1-202ENST00000368407 NBPF4Q96M43 638 aa34.02■■■■□ 3.04
EFNA1-202ENST00000368407 BTG4Q9NY30 223 aa34.02■■■■□ 3.04
EFNA1-202ENST00000368407 IGSF1Q8N6C5 1336 aa34.02■■■■□ 3.04
EFNA1-202ENST00000368407 RGPD1P0DJD0 1748 aa34.02■■■■□ 3.04
EFNA1-202ENST00000368407 SULT6B1Q6IMI4 303 aa34.01■■■■□ 3.04
EFNA1-202ENST00000368407 SLFN5Q08AF3 891 aa34■■■■□ 3.03
EFNA1-202ENST00000368407 USHBP1Q8N6Y0 703 aa34■■■■□ 3.03
EFNA1-202ENST00000368407 COL14A1Q05707 1796 aaKnown RBP34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms