RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 USP19O94966 1318 aa15.29■□□□□ 0.04
USF1-201ENST00000368019 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
USF1-201ENST00000368019 SSH2Q76I76 1423 aa15.27■□□□□ 0.04
USF1-201ENST00000368019 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
USF1-201ENST00000368019 ANP32AP39687 249 aaKnown RBP15.27■□□□□ 0.04
USF1-201ENST00000368019 BARGINQ6ZT62 677 aa15.27■□□□□ 0.04
USF1-201ENST00000368019 ABTB2Q8N961 1025 aa15.27■□□□□ 0.04
USF1-201ENST00000368019 CCDC136Q96JN2 1154 aa15.27■□□□□ 0.04
USF1-201ENST00000368019 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
USF1-201ENST00000368019 QRICH2Q9H0J4 1663 aa15.27■□□□□ 0.03
USF1-201ENST00000368019 CENPJQ9HC77 1338 aaPredicted RBP15.26■□□□□ 0.03
USF1-201ENST00000368019 FAM196AQ6ZSG2 479 aa15.26■□□□□ 0.03
USF1-201ENST00000368019 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
USF1-201ENST00000368019 IPO9Q96P70 1041 aaKnown RBP15.25■□□□□ 0.03
USF1-201ENST00000368019 CAMKK2Q96RR4 588 aa15.25■□□□□ 0.03
USF1-201ENST00000368019 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
USF1-201ENST00000368019 GCP02774 474 aa15.24■□□□□ 0.03
USF1-201ENST00000368019 EVA1CP58658 441 aa15.24■□□□□ 0.03
USF1-201ENST00000368019 EZH2Q15910 746 aaKnown RBP15.24■□□□□ 0.03
USF1-201ENST00000368019 LARP1Q6PKG0 1096 aaKnown RBP15.24■□□□□ 0.03
USF1-201ENST00000368019 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
USF1-201ENST00000368019 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
USF1-201ENST00000368019 TRIM37O94972 964 aa15.23■□□□□ 0.03
USF1-201ENST00000368019 SRPK2P78362 688 aaKnown RBP15.23■□□□□ 0.03
USF1-201ENST00000368019 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
USF1-201ENST00000368019 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
USF1-201ENST00000368019 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
USF1-201ENST00000368019 RREB1Q92766 1687 aa15.22■□□□□ 0.03
USF1-201ENST00000368019 MS4A1P11836 297 aa15.22■□□□□ 0.03
USF1-201ENST00000368019 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
USF1-201ENST00000368019 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
USF1-201ENST00000368019 COL18A1P39060 1754 aa15.21■□□□□ 0.03
USF1-201ENST00000368019 COL5A2P05997 1499 aaPredicted RBP15.21■□□□□ 0.03
USF1-201ENST00000368019 USP6P35125 1406 aa15.21■□□□□ 0.03
USF1-201ENST00000368019 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.03
USF1-201ENST00000368019 CABP1Q9NZU7 370 aa15.21■□□□□ 0.03
USF1-201ENST00000368019 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.03
USF1-201ENST00000368019 SLIT3O75094 1523 aa15.21■□□□□ 0.03
USF1-201ENST00000368019 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
USF1-201ENST00000368019 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
USF1-201ENST00000368019 SBF2Q86WG5 1849 aa15.2■□□□□ 0.02
USF1-201ENST00000368019 PIK3C2AO00443 1686 aa15.19■□□□□ 0.02
USF1-201ENST00000368019 APBA3O96018 575 aa15.19■□□□□ 0.02
USF1-201ENST00000368019 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
USF1-201ENST00000368019 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
USF1-201ENST00000368019 PEAK1Q9H792 1746 aa15.19■□□□□ 0.02
USF1-201ENST00000368019 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
USF1-201ENST00000368019 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
USF1-201ENST00000368019 CRB1P82279 1406 aa15.17■□□□□ 0.02
USF1-201ENST00000368019 NLRP6P59044 892 aa15.17■□□□□ 0.02
USF1-201ENST00000368019 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
USF1-201ENST00000368019 WNK3Q9BYP7 1800 aa15.16■□□□□ 0.02
USF1-201ENST00000368019 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
USF1-201ENST00000368019 EVC2Q86UK5 1308 aa15.16■□□□□ 0.02
USF1-201ENST00000368019 LRRC37A3O60309 1634 aa15.14■□□□□ 0.01
USF1-201ENST00000368019 RGPD3A6NKT7 1758 aaPredicted RBP15.13■□□□□ 0.01
USF1-201ENST00000368019 RGPD4Q7Z3J3 1758 aa15.13■□□□□ 0.01
USF1-201ENST00000368019 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
USF1-201ENST00000368019 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
USF1-201ENST00000368019 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
USF1-201ENST00000368019 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
USF1-201ENST00000368019 ARHGEF25Q86VW2 580 aa15.12■□□□□ 0.01
USF1-201ENST00000368019 TTC21BQ7Z4L5 1316 aa15.12■□□□□ 0.01
USF1-201ENST00000368019 OVOS2A0A0G2JMS6 1433 aa15.11■□□□□ 0.01
USF1-201ENST00000368019 OVOS2A0A0J9YW53 1432 aa15.11■□□□□ 0.01
USF1-201ENST00000368019 CPSF1Q10570 1443 aaKnown RBP15.11■□□□□ 0.01
USF1-201ENST00000368019 OVOS2Q6IE36 1432 aa15.11■□□□□ 0.01
USF1-201ENST00000368019 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
USF1-201ENST00000368019 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
USF1-201ENST00000368019 MON2Q7Z3U7 1717 aa15.1■□□□□ 0.01
USF1-201ENST00000368019 NFAT5O94916 1531 aa15.1■□□□□ 0.01
USF1-201ENST00000368019 TTC21AQ8NDW8 1320 aa15.1■□□□□ 0.01
USF1-201ENST00000368019 ZBTB7CA1YPR0 619 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 PLSCR1O15162 318 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 DDB1Q16531 1140 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 NBPF14Q5TI25 921 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 TOM1L2Q6ZVM7 507 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 KCNH5Q8NCM2 988 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 BCL9O00512 1426 aa15.09■□□□□ 0.01
USF1-201ENST00000368019 PER1O15534 1290 aaPredicted RBP15.08■□□□□ 0
USF1-201ENST00000368019 SBNO2Q9Y2G9 1366 aa15.08■□□□□ 0
USF1-201ENST00000368019 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
USF1-201ENST00000368019 MARCH10Q8NA82 808 aaPredicted RBP15.07■□□□□ 0
USF1-201ENST00000368019 CARD10Q9BWT7 1032 aa15.07■□□□□ 0
USF1-201ENST00000368019 ABCC6O95255 1503 aa15.07■□□□□ 0
USF1-201ENST00000368019 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
USF1-201ENST00000368019 DDRGK1Q96HY6 314 aa15.06■□□□□ 0
USF1-201ENST00000368019 CDCA7Q9BWT1 371 aaPredicted RBP15.06■□□□□ 0
USF1-201ENST00000368019 BACH2Q9BYV9 841 aa15.06■□□□□ 0
USF1-201ENST00000368019 BCL11BQ9C0K0 894 aaPredicted RBP15.06■□□□□ 0
USF1-201ENST00000368019 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
USF1-201ENST00000368019 USP31Q70CQ4 1352 aa15.05■□□□□ -0
USF1-201ENST00000368019 CD163L1Q9NR16 1453 aa15.05■□□□□ -0
USF1-201ENST00000368019 CASZ1Q86V15 1759 aa15.05■□□□□ -0
USF1-201ENST00000368019 PDE4AP27815 886 aa15.04■□□□□ -0
USF1-201ENST00000368019 PROM2Q8N271 834 aa15.04■□□□□ -0
USF1-201ENST00000368019 KCNQ2O43526 872 aa15.03■□□□□ -0
USF1-201ENST00000368019 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
USF1-201ENST00000368019 LTN1O94822 1766 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms