RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 ENAMQ9NRM1 1142 aa9.14□□□□□ -0.95
XCL1-201ENST00000367818 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
XCL1-201ENST00000367818 Q8N3U1 123 aa9.13□□□□□ -0.95
XCL1-201ENST00000367818 Q6ZVU0 165 aa9.12□□□□□ -0.95
XCL1-201ENST00000367818 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
XCL1-201ENST00000367818 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
XCL1-201ENST00000367818 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
XCL1-201ENST00000367818 SH3RF1Q7Z6J0 888 aa9.11□□□□□ -0.95
XCL1-201ENST00000367818 CFAP99D6REC4 459 aa9.1□□□□□ -0.95
XCL1-201ENST00000367818 CBLBQ13191 982 aa9.1□□□□□ -0.95
XCL1-201ENST00000367818 CNTNAP5Q8WYK1 1306 aa9.09□□□□□ -0.95
XCL1-201ENST00000367818 GAS6Q14393 721 aa9.09□□□□□ -0.95
XCL1-201ENST00000367818 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
XCL1-201ENST00000367818 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
XCL1-201ENST00000367818 GJA5P36382 358 aa9.07□□□□□ -0.96
XCL1-201ENST00000367818 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
XCL1-201ENST00000367818 BEND7Q8N7W2 519 aaPredicted RBP9.07□□□□□ -0.96
XCL1-201ENST00000367818 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
XCL1-201ENST00000367818 CTSOP43234 321 aaPredicted RBP9.06□□□□□ -0.96
XCL1-201ENST00000367818 NBPF14Q5TI25 921 aa9.06□□□□□ -0.96
XCL1-201ENST00000367818 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
XCL1-201ENST00000367818 RSBN1LQ6PCB5 846 aaPredicted RBP9.04□□□□□ -0.96
XCL1-201ENST00000367818 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
XCL1-201ENST00000367818 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
XCL1-201ENST00000367818 MAGEB6P1A0A0J9YX57 407 aa9.03□□□□□ -0.96
XCL1-201ENST00000367818 BAG6P46379 1132 aa9.03□□□□□ -0.96
XCL1-201ENST00000367818 KRTAP1-3Q8IUG1 177 aa9.03□□□□□ -0.96
XCL1-201ENST00000367818 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
XCL1-201ENST00000367818 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
XCL1-201ENST00000367818 POLMQ9NP87 494 aaPredicted RBP9.03□□□□□ -0.96
XCL1-201ENST00000367818 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
XCL1-201ENST00000367818 MBIPQ9NS73 344 aa9.02□□□□□ -0.97
XCL1-201ENST00000367818 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
XCL1-201ENST00000367818 HRCP23327 699 aa9.01□□□□□ -0.97
XCL1-201ENST00000367818 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
XCL1-201ENST00000367818 RELBQ01201 579 aa9□□□□□ -0.97
XCL1-201ENST00000367818 AGBL1Q96MI9 1066 aa9□□□□□ -0.97
XCL1-201ENST00000367818 CUEDC1Q9NWM3 386 aaPredicted RBP9□□□□□ -0.97
XCL1-201ENST00000367818 BCRP11274 1271 aa8.99□□□□□ -0.97
XCL1-201ENST00000367818 CARD14Q9BXL6 1004 aa8.99□□□□□ -0.97
XCL1-201ENST00000367818 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
XCL1-201ENST00000367818 IGF1RP08069 1367 aa8.99□□□□□ -0.97
XCL1-201ENST00000367818 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
XCL1-201ENST00000367818 TULP1O00294 542 aaPredicted RBP8.98□□□□□ -0.97
XCL1-201ENST00000367818 DHX9Q08211 1270 aaKnown RBP8.98□□□□□ -0.97
XCL1-201ENST00000367818 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
XCL1-201ENST00000367818 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
XCL1-201ENST00000367818 PRPF38BQ5VTL8 546 aaKnown RBP8.98□□□□□ -0.97
XCL1-201ENST00000367818 TBC1D2Q9BYX2 928 aa8.98□□□□□ -0.97
XCL1-201ENST00000367818 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
XCL1-201ENST00000367818 FURINP09958 794 aa8.96□□□□□ -0.98
XCL1-201ENST00000367818 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
XCL1-201ENST00000367818 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
XCL1-201ENST00000367818 CABLES1Q8TDN4 633 aa8.95□□□□□ -0.98
XCL1-201ENST00000367818 GPKOWQ92917 476 aaPredicted RBP eCLIP8.95□□□□□ -0.98
XCL1-201ENST00000367818 KRBA1A5PL33 1030 aa8.94□□□□□ -0.98
XCL1-201ENST00000367818 TSC1Q92574 1164 aa8.94□□□□□ -0.98
XCL1-201ENST00000367818 ACDQ96AP0 544 aa8.94□□□□□ -0.98
XCL1-201ENST00000367818 GMCL1Q96IK5 515 aa8.94□□□□□ -0.98
XCL1-201ENST00000367818 KCTD15Q96SI1 283 aaPredicted RBP8.94□□□□□ -0.98
XCL1-201ENST00000367818 LRRC4BQ9NT99 713 aa8.94□□□□□ -0.98
XCL1-201ENST00000367818 CDV3Q9UKY7 258 aaKnown RBP8.94□□□□□ -0.98
XCL1-201ENST00000367818 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
XCL1-201ENST00000367818 SLC10A4Q96EP9 437 aa8.93□□□□□ -0.98
XCL1-201ENST00000367818 ZNF395Q9H8N7 513 aaPredicted RBP8.93□□□□□ -0.98
XCL1-201ENST00000367818 GPR25O00155 361 aa8.92□□□□□ -0.98
XCL1-201ENST00000367818 FOXR1Q6PIV2 292 aa8.92□□□□□ -0.98
XCL1-201ENST00000367818 ALYREFQ86V81 257 aaKnown RBP8.92□□□□□ -0.98
XCL1-201ENST00000367818 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
XCL1-201ENST00000367818 INTS6LQ5JSJ4 861 aaKnown RBP8.91□□□□□ -0.98
XCL1-201ENST00000367818 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
XCL1-201ENST00000367818 AMHR2Q16671 573 aa8.9□□□□□ -0.98
XCL1-201ENST00000367818 CSPP1Q1MSJ5 1256 aa8.89□□□□□ -0.99
XCL1-201ENST00000367818 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
XCL1-201ENST00000367818 ADH1AP07327 375 aa8.88□□□□□ -0.99
XCL1-201ENST00000367818 RIC3Q7Z5B4 369 aa8.88□□□□□ -0.99
XCL1-201ENST00000367818 OIP5O43482 229 aa8.87□□□□□ -0.99
XCL1-201ENST00000367818 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
XCL1-201ENST00000367818 ARHGAP9Q9BRR9 750 aa8.87□□□□□ -0.99
XCL1-201ENST00000367818 MKL2Q9ULH7 1088 aa8.87□□□□□ -0.99
XCL1-201ENST00000367818 HELBQ8NG08 1087 aaPredicted RBP8.86□□□□□ -0.99
XCL1-201ENST00000367818 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
XCL1-201ENST00000367818 NSFL1CQ9UNZ2 370 aaKnown RBP8.86□□□□□ -0.99
XCL1-201ENST00000367818 RHOQP17081 205 aa8.85□□□□□ -0.99
XCL1-201ENST00000367818 COL8A1P27658 744 aa8.85□□□□□ -0.99
XCL1-201ENST00000367818 PTGIRP43119 386 aa8.85□□□□□ -0.99
XCL1-201ENST00000367818 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
XCL1-201ENST00000367818 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
XCL1-201ENST00000367818 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
XCL1-201ENST00000367818 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
XCL1-201ENST00000367818 MX2P20592 715 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 DBN1Q16643 649 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 QPCTQ16769 361 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
XCL1-201ENST00000367818 PDXDC2PQ6P474 469 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 RIPOR1Q6ZS17 1223 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 PRICKLE2Q7Z3G6 844 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
XCL1-201ENST00000367818 KRTAP4-12Q9BQ66 201 aa8.84□□□□□ -0.99
XCL1-201ENST00000367818 TMPRSS4Q9NRS4 437 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms