RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
CFHR3-201ENST00000367425 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
CFHR3-201ENST00000367425 NR1H3Q13133 447 aa8.67□□□□□ -1.02
CFHR3-201ENST00000367425 KRTAP9-9Q9BYP9 154 aa8.67□□□□□ -1.02
CFHR3-201ENST00000367425 KRTAP9-4Q9BYQ2 154 aa8.67□□□□□ -1.02
CFHR3-201ENST00000367425 ZBBXA8MT70 800 aa8.66□□□□□ -1.02
CFHR3-201ENST00000367425 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
CFHR3-201ENST00000367425 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
CFHR3-201ENST00000367425 GPAT2Q6NUI2 795 aa8.66□□□□□ -1.02
CFHR3-201ENST00000367425 GPKOWQ92917 476 aaPredicted RBP eCLIP8.66□□□□□ -1.02
CFHR3-201ENST00000367425 S1PR4O95977 384 aa8.65□□□□□ -1.02
CFHR3-201ENST00000367425 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
CFHR3-201ENST00000367425 NKX2-3Q8TAU0 364 aa8.65□□□□□ -1.02
CFHR3-201ENST00000367425 DNMT3AQ9Y6K1 912 aaPredicted RBP8.65□□□□□ -1.02
CFHR3-201ENST00000367425 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.03
CFHR3-201ENST00000367425 FBXO45P0C2W1 286 aa8.64□□□□□ -1.03
CFHR3-201ENST00000367425 PTK2Q05397 1052 aa8.64□□□□□ -1.03
CFHR3-201ENST00000367425 ADAMTS19Q8TE59 1207 aa8.64□□□□□ -1.03
CFHR3-201ENST00000367425 UNC93B1Q9H1C4 597 aa8.64□□□□□ -1.03
CFHR3-201ENST00000367425 ALG2Q9H553 416 aa8.64□□□□□ -1.03
CFHR3-201ENST00000367425 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
CFHR3-201ENST00000367425 PDXDC2PQ6P474 469 aa8.63□□□□□ -1.03
CFHR3-201ENST00000367425 FCF1Q9Y324 198 aaKnown RBP8.62□□□□□ -1.03
CFHR3-201ENST00000367425 ADAM23O75077 832 aa8.62□□□□□ -1.03
CFHR3-201ENST00000367425 SNRPBP14678 240 aaKnown RBP8.62□□□□□ -1.03
CFHR3-201ENST00000367425 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
CFHR3-201ENST00000367425 ZNF592Q92610 1267 aa8.62□□□□□ -1.03
CFHR3-201ENST00000367425 KRTAP4-12Q9BQ66 201 aa8.62□□□□□ -1.03
CFHR3-201ENST00000367425 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
CFHR3-201ENST00000367425 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
CFHR3-201ENST00000367425 ATP13A2Q9NQ11 1180 aa8.58□□□□□ -1.04
CFHR3-201ENST00000367425 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
CFHR3-201ENST00000367425 MCCD1P59942 119 aaPredicted RBP8.58□□□□□ -1.04
CFHR3-201ENST00000367425 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
CFHR3-201ENST00000367425 PPP1R12CQ9BZL4 782 aa8.58□□□□□ -1.04
CFHR3-201ENST00000367425 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
CFHR3-201ENST00000367425 PCDHB9Q9Y5E1 797 aa8.57□□□□□ -1.04
CFHR3-201ENST00000367425 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
CFHR3-201ENST00000367425 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
CFHR3-201ENST00000367425 AGERQ15109 404 aa8.56□□□□□ -1.04
CFHR3-201ENST00000367425 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
CFHR3-201ENST00000367425 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
CFHR3-201ENST00000367425 BAP1Q92560 729 aa8.56□□□□□ -1.04
CFHR3-201ENST00000367425 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
CFHR3-201ENST00000367425 ADAM32Q8TC27 787 aa8.55□□□□□ -1.04
CFHR3-201ENST00000367425 UCN2Q96RP3 112 aa8.55□□□□□ -1.04
CFHR3-201ENST00000367425 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 PALM3A6NDB9 673 aaPredicted RBP8.54□□□□□ -1.04
CFHR3-201ENST00000367425 Q8N3U1 123 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 ZNF511Q8NB15 262 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
CFHR3-201ENST00000367425 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 CARD14Q9BXL6 1004 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 KRTAP4-7Q9BYR0 210 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 RFX1P22670 979 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 CFAP70Q5T0N1 1121 aa8.54□□□□□ -1.04
CFHR3-201ENST00000367425 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
CFHR3-201ENST00000367425 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
CFHR3-201ENST00000367425 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
CFHR3-201ENST00000367425 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.04
CFHR3-201ENST00000367425 ATP9BO43861 1147 aa8.52□□□□□ -1.05
CFHR3-201ENST00000367425 SH3RF1Q7Z6J0 888 aa8.52□□□□□ -1.05
CFHR3-201ENST00000367425 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
CFHR3-201ENST00000367425 FOXJ1Q92949 421 aa8.52□□□□□ -1.05
CFHR3-201ENST00000367425 PBXIP1Q96AQ6 731 aa8.52□□□□□ -1.05
CFHR3-201ENST00000367425 SLFNL1Q499Z3 407 aa8.51□□□□□ -1.05
CFHR3-201ENST00000367425 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
CFHR3-201ENST00000367425 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
CFHR3-201ENST00000367425 NFATC2IPQ8NCF5 419 aa8.51□□□□□ -1.05
CFHR3-201ENST00000367425 CEP126Q9P2H0 1117 aa8.51□□□□□ -1.05
CFHR3-201ENST00000367425 TRIM32Q13049 653 aa8.51□□□□□ -1.05
CFHR3-201ENST00000367425 MAFBQ9Y5Q3 323 aaPredicted RBP8.51□□□□□ -1.05
CFHR3-201ENST00000367425 SKIP12755 728 aa8.5□□□□□ -1.05
CFHR3-201ENST00000367425 SH3BP2P78314 561 aa8.5□□□□□ -1.05
CFHR3-201ENST00000367425 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
CFHR3-201ENST00000367425 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
CFHR3-201ENST00000367425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
CFHR3-201ENST00000367425 H3BM21 787 aa8.49□□□□□ -1.05
CFHR3-201ENST00000367425 PIK3CDO00329 1044 aa8.49□□□□□ -1.05
CFHR3-201ENST00000367425 RPIAP49247 311 aa8.49□□□□□ -1.05
CFHR3-201ENST00000367425 PLA2G2CQ5R387 149 aa8.49□□□□□ -1.05
CFHR3-201ENST00000367425 SLC10A4Q96EP9 437 aa8.49□□□□□ -1.05
CFHR3-201ENST00000367425 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
CFHR3-201ENST00000367425 WNT7BP56706 349 aa8.48□□□□□ -1.05
CFHR3-201ENST00000367425 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
CFHR3-201ENST00000367425 C1QTNF2Q9BXJ5 285 aa8.47□□□□□ -1.05
CFHR3-201ENST00000367425 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
CFHR3-201ENST00000367425 FOXC1Q12948 553 aa8.47□□□□□ -1.05
CFHR3-201ENST00000367425 FAM174AQ8TBP5 190 aa8.47□□□□□ -1.05
CFHR3-201ENST00000367425 TOR4AQ9NXH8 423 aa8.47□□□□□ -1.05
CFHR3-201ENST00000367425 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
CFHR3-201ENST00000367425 USP17L3A6NCW0 530 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 USP17L4A6NCW7 530 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
CFHR3-201ENST00000367425 PDE4CQ08493 712 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 USP17L2Q6R6M4 530 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 USP17L1Q7RTZ2 530 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 RETREG2Q8NC44 543 aa8.46□□□□□ -1.06
CFHR3-201ENST00000367425 VARSP26640 1264 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms