RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 EIF4A2Q14240 407 aaKnown RBP23.92■■□□□ 1.42
CCDC7-203ENST00000362006 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
CCDC7-203ENST00000362006 RUNDC1Q96C34 613 aa23.91■■□□□ 1.42
CCDC7-203ENST00000362006 FCHSD2O94868 740 aa23.9■■□□□ 1.42
CCDC7-203ENST00000362006 PIP4K2BP78356 416 aa23.9■■□□□ 1.42
CCDC7-203ENST00000362006 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
CCDC7-203ENST00000362006 CPDO75976 1380 aa23.88■■□□□ 1.41
CCDC7-203ENST00000362006 ABCC6O95255 1503 aa23.88■■□□□ 1.41
CCDC7-203ENST00000362006 PLEKHG5O94827 1062 aa23.87■■□□□ 1.41
CCDC7-203ENST00000362006 CABLES1Q8TDN4 633 aa23.87■■□□□ 1.41
CCDC7-203ENST00000362006 CCDC146Q8IYE0 955 aa23.86■■□□□ 1.41
CCDC7-203ENST00000362006 ZC3H6P61129 1189 aaKnown RBP23.86■■□□□ 1.41
CCDC7-203ENST00000362006 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
CCDC7-203ENST00000362006 HAP1P54257 671 aaPredicted RBP23.85■■□□□ 1.41
CCDC7-203ENST00000362006 COL16A1Q07092 1604 aaPredicted RBP23.85■■□□□ 1.41
CCDC7-203ENST00000362006 RGPD1P0DJD0 1748 aa23.85■■□□□ 1.41
CCDC7-203ENST00000362006 COL22A1Q8NFW1 1626 aaPredicted RBP23.84■■□□□ 1.41
CCDC7-203ENST00000362006 NEFMP07197 916 aa23.84■■□□□ 1.41
CCDC7-203ENST00000362006 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
CCDC7-203ENST00000362006 ABCA3Q99758 1704 aa23.84■■□□□ 1.41
CCDC7-203ENST00000362006 PLEKHF1Q96S99 279 aa23.83■■□□□ 1.41
CCDC7-203ENST00000362006 RSPH6AQ9H0K4 717 aa23.83■■□□□ 1.41
CCDC7-203ENST00000362006 MAPK8IP3Q9UPT6 1336 aa23.82■■□□□ 1.4
CCDC7-203ENST00000362006 APAF1O14727 1248 aa23.82■■□□□ 1.4
CCDC7-203ENST00000362006 IGSF1Q8N6C5 1336 aa23.8■■□□□ 1.4
CCDC7-203ENST00000362006 COL18A1P39060 1754 aa23.8■■□□□ 1.4
CCDC7-203ENST00000362006 KIAA0232Q92628 1395 aa23.8■■□□□ 1.4
CCDC7-203ENST00000362006 HMOX1P09601 288 aa23.8■■□□□ 1.4
CCDC7-203ENST00000362006 TCP11L2Q8N4U5 519 aa23.8■■□□□ 1.4
CCDC7-203ENST00000362006 EYA1Q99502 592 aa23.8■■□□□ 1.4
CCDC7-203ENST00000362006 PRKAR2BP31323 418 aa23.79■■□□□ 1.4
CCDC7-203ENST00000362006 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
CCDC7-203ENST00000362006 SULT6B1Q6IMI4 303 aa23.78■■□□□ 1.4
CCDC7-203ENST00000362006 LTV1Q96GA3 475 aaPredicted RBP23.78■■□□□ 1.4
CCDC7-203ENST00000362006 KDRP35968 1356 aa23.77■■□□□ 1.4
CCDC7-203ENST00000362006 PRDM11Q9NQV5 511 aa23.77■■□□□ 1.4
CCDC7-203ENST00000362006 ANKRD24Q8TF21 1146 aa23.77■■□□□ 1.4
CCDC7-203ENST00000362006 AXIN2Q9Y2T1 843 aa23.77■■□□□ 1.4
CCDC7-203ENST00000362006 RGPD5Q99666 1765 aa23.76■■□□□ 1.39
CCDC7-203ENST00000362006 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
CCDC7-203ENST00000362006 CCDC27Q2M243 656 aa23.74■■□□□ 1.39
CCDC7-203ENST00000362006 ERBB3P21860 1342 aa23.74■■□□□ 1.39
CCDC7-203ENST00000362006 FAM208AQ9UK61 1670 aaKnown RBP23.73■■□□□ 1.39
CCDC7-203ENST00000362006 SENP3-EIF4A1A0A087X0R7 540 aa23.72■■□□□ 1.39
CCDC7-203ENST00000362006 TMPOP42166 694 aaKnown RBP23.72■■□□□ 1.39
CCDC7-203ENST00000362006 CHRNA2Q15822 529 aa23.72■■□□□ 1.39
CCDC7-203ENST00000362006 AEBP1Q8IUX7 1158 aa23.72■■□□□ 1.39
CCDC7-203ENST00000362006 LMO7Q8WWI1 1683 aa23.71■■□□□ 1.39
CCDC7-203ENST00000362006 ZNF521Q96K83 1311 aa23.71■■□□□ 1.39
CCDC7-203ENST00000362006 NBPF6Q5VWK0 638 aa23.71■■□□□ 1.39
CCDC7-203ENST00000362006 NBPF4Q96M43 638 aa23.71■■□□□ 1.39
CCDC7-203ENST00000362006 JCADQ9P266 1359 aa23.7■■□□□ 1.38
CCDC7-203ENST00000362006 NFE2L2Q16236 605 aa23.7■■□□□ 1.38
CCDC7-203ENST00000362006 CAMTA1Q9Y6Y1 1673 aa23.7■■□□□ 1.38
CCDC7-203ENST00000362006 NCAPD2Q15021 1401 aa23.7■■□□□ 1.38
CCDC7-203ENST00000362006 PHACTR3Q96KR7 559 aa23.69■■□□□ 1.38
CCDC7-203ENST00000362006 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
CCDC7-203ENST00000362006 RGPD2P0DJD1 1756 aa23.68■■□□□ 1.38
CCDC7-203ENST00000362006 COL14A1Q05707 1796 aaKnown RBP23.68■■□□□ 1.38
CCDC7-203ENST00000362006 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
CCDC7-203ENST00000362006 RRP7AQ9Y3A4 280 aaKnown RBP23.68■■□□□ 1.38
CCDC7-203ENST00000362006 WWC1Q8IX03 1113 aa23.68■■□□□ 1.38
CCDC7-203ENST00000362006 FAM83GA6ND36 823 aa23.67■■□□□ 1.38
CCDC7-203ENST00000362006 CSB-PGBD3P0DP91 1061 aa23.67■■□□□ 1.38
CCDC7-203ENST00000362006 RIPK4P57078 832 aa23.67■■□□□ 1.38
CCDC7-203ENST00000362006 GOLGA2Q08379 1002 aa23.67■■□□□ 1.38
CCDC7-203ENST00000362006 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
CCDC7-203ENST00000362006 LMOD3Q0VAK6 560 aa23.66■■□□□ 1.38
CCDC7-203ENST00000362006 NLRP2Q9NX02 1062 aa23.65■■□□□ 1.38
CCDC7-203ENST00000362006 WDR17Q8IZU2 1322 aa23.64■■□□□ 1.38
CCDC7-203ENST00000362006 COL5A2P05997 1499 aaPredicted RBP23.64■■□□□ 1.37
CCDC7-203ENST00000362006 USHBP1Q8N6Y0 703 aa23.63■■□□□ 1.37
CCDC7-203ENST00000362006 GAS2L2Q8NHY3 880 aa23.63■■□□□ 1.37
CCDC7-203ENST00000362006 PLEKHG2Q9H7P9 1386 aa23.63■■□□□ 1.37
CCDC7-203ENST00000362006 EVA1CP58658 441 aa23.62■■□□□ 1.37
CCDC7-203ENST00000362006 SPATA31A6Q5VVP1 1343 aa23.62■■□□□ 1.37
CCDC7-203ENST00000362006 TRIM35Q9UPQ4 493 aa23.62■■□□□ 1.37
CCDC7-203ENST00000362006 DLG5Q8TDM6 1919 aa23.61■■□□□ 1.37
CCDC7-203ENST00000362006 E9PSI1 815 aa23.6■■□□□ 1.37
CCDC7-203ENST00000362006 CALD1Q05682 793 aaKnown RBP23.6■■□□□ 1.37
CCDC7-203ENST00000362006 AMOTQ4VCS5 1084 aa23.6■■□□□ 1.37
CCDC7-203ENST00000362006 HSPA1LP34931 641 aa23.59■■□□□ 1.37
CCDC7-203ENST00000362006 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
CCDC7-203ENST00000362006 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
CCDC7-203ENST00000362006 SLFN5Q08AF3 891 aa23.59■■□□□ 1.37
CCDC7-203ENST00000362006 MTHFSDQ2M296 383 aaKnown RBP23.59■■□□□ 1.37
CCDC7-203ENST00000362006 PLEKHO1Q53GL0 409 aaPredicted RBP23.59■■□□□ 1.37
CCDC7-203ENST00000362006 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
CCDC7-203ENST00000362006 BTG4Q9NY30 223 aa23.59■■□□□ 1.37
CCDC7-203ENST00000362006 IL16Q14005 1332 aa23.59■■□□□ 1.37
CCDC7-203ENST00000362006 TOM1L2Q6ZVM7 507 aa23.58■■□□□ 1.37
CCDC7-203ENST00000362006 RAPGEF4Q8WZA2 1011 aa23.58■■□□□ 1.37
CCDC7-203ENST00000362006 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.37
CCDC7-203ENST00000362006 HTATSF1O43719 755 aaKnown RBP23.57■■□□□ 1.36
CCDC7-203ENST00000362006 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
CCDC7-203ENST00000362006 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
CCDC7-203ENST00000362006 TRMT2AQ8IZ69 625 aaKnown RBP23.56■■□□□ 1.36
CCDC7-203ENST00000362006 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
CCDC7-203ENST00000362006 TATP17735 454 aaPredicted RBP23.55■■□□□ 1.36
CCDC7-203ENST00000362006 CRB1P82279 1406 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms