RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SIN3AQ96ST3 1273 aa30.32■■■□□ 2.44
CD47-202ENST00000361309 CPSF1Q10570 1443 aaKnown RBP30.31■■■□□ 2.44
CD47-202ENST00000361309 TTC21BQ7Z4L5 1316 aa30.3■■■□□ 2.44
CD47-202ENST00000361309 WDR17Q8IZU2 1322 aa30.3■■■□□ 2.44
CD47-202ENST00000361309 ZNF692Q9BU19 519 aaPredicted RBP30.3■■■□□ 2.44
CD47-202ENST00000361309 ROCK2O75116 1388 aaKnown RBP30.29■■■□□ 2.44
CD47-202ENST00000361309 ARHGEF25Q86VW2 580 aa30.28■■■□□ 2.44
CD47-202ENST00000361309 PLSCR1O15162 318 aa30.27■■■□□ 2.44
CD47-202ENST00000361309 SOX12O15370 315 aa30.27■■■□□ 2.44
CD47-202ENST00000361309 KCNH5Q8NCM2 988 aa30.27■■■□□ 2.44
CD47-202ENST00000361309 NEUROD1Q13562 356 aa30.26■■■□□ 2.43
CD47-202ENST00000361309 PTF1AQ7RTS3 328 aa30.25■■■□□ 2.43
CD47-202ENST00000361309 SPON1Q9HCB6 807 aa30.25■■■□□ 2.43
CD47-202ENST00000361309 TTC21AQ8NDW8 1320 aa30.24■■■□□ 2.43
CD47-202ENST00000361309 MARCH10Q8NA82 808 aaPredicted RBP30.24■■■□□ 2.43
CD47-202ENST00000361309 BCL11BQ9C0K0 894 aaPredicted RBP30.24■■■□□ 2.43
CD47-202ENST00000361309 KCNQ2O43526 872 aa30.23■■■□□ 2.43
CD47-202ENST00000361309 CDCA7Q9BWT1 371 aaPredicted RBP30.23■■■□□ 2.43
CD47-202ENST00000361309 NFAT5O94916 1531 aa30.22■■■□□ 2.43
CD47-202ENST00000361309 MON2Q7Z3U7 1717 aa30.22■■■□□ 2.43
CD47-202ENST00000361309 CSB-PGBD3P0DP91 1061 aa30.22■■■□□ 2.43
CD47-202ENST00000361309 KTN1Q86UP2 1357 aaKnown RBP30.21■■■□□ 2.43
CD47-202ENST00000361309 CARD10Q9BWT7 1032 aa30.21■■■□□ 2.43
CD47-202ENST00000361309 PPP1R1BQ9UD71 204 aaPredicted RBP30.21■■■□□ 2.43
CD47-202ENST00000361309 CASZ1Q86V15 1759 aa30.19■■■□□ 2.42
CD47-202ENST00000361309 ANO8Q9HCE9 1232 aaPredicted RBP30.19■■■□□ 2.42
CD47-202ENST00000361309 BCL9O00512 1426 aa30.19■■■□□ 2.42
CD47-202ENST00000361309 PROM2Q8N271 834 aa30.16■■■□□ 2.42
CD47-202ENST00000361309 ABCC6O95255 1503 aa30.15■■■□□ 2.42
CD47-202ENST00000361309 LTN1O94822 1766 aa30.14■■■□□ 2.42
CD47-202ENST00000361309 EXOC5O00471 708 aa30.14■■■□□ 2.42
CD47-202ENST00000361309 USP54Q70EL1 1684 aa30.14■■■□□ 2.41
CD47-202ENST00000361309 CCDC7Q96M83 1385 aa30.13■■■□□ 2.41
CD47-202ENST00000361309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.12■■■□□ 2.41
CD47-202ENST00000361309 NINLQ9Y2I6 1382 aa30.12■■■□□ 2.41
CD47-202ENST00000361309 KAT6BQ8WYB5 2073 aa30.11■■■□□ 2.41
CD47-202ENST00000361309 YY1P25490 414 aa30.1■■■□□ 2.41
CD47-202ENST00000361309 PDGFDQ9GZP0 370 aaPredicted RBP30.1■■■□□ 2.41
CD47-202ENST00000361309 TNS2Q63HR2 1409 aa30.09■■■□□ 2.41
CD47-202ENST00000361309 USP31Q70CQ4 1352 aa30.09■■■□□ 2.41
CD47-202ENST00000361309 SBNO2Q9Y2G9 1366 aa30.09■■■□□ 2.41
CD47-202ENST00000361309 CD163L1Q9NR16 1453 aa30.08■■■□□ 2.41
CD47-202ENST00000361309 TXNRD1Q16881 649 aa30.07■■■□□ 2.4
CD47-202ENST00000361309 NHSQ6T4R5 1651 aa30.07■■■□□ 2.4
CD47-202ENST00000361309 NME9Q86XW9 330 aa30.06■■■□□ 2.4
CD47-202ENST00000361309 DCAF8L1A6NGE4 600 aa30.05■■■□□ 2.4
CD47-202ENST00000361309 CARD11Q9BXL7 1154 aa30.05■■■□□ 2.4
CD47-202ENST00000361309 ZBTB7AO95365 584 aa30.04■■■□□ 2.4
CD47-202ENST00000361309 TMC1Q8TDI8 760 aa30.04■■■□□ 2.4
CD47-202ENST00000361309 STK32BQ9NY57 414 aa30.04■■■□□ 2.4
CD47-202ENST00000361309 ERBB3P21860 1342 aa30.03■■■□□ 2.4
CD47-202ENST00000361309 NLRP2Q9NX02 1062 aa30.03■■■□□ 2.4
CD47-202ENST00000361309 MYOM1P52179 1685 aa30.03■■■□□ 2.4
CD47-202ENST00000361309 SLC12A5Q9H2X9 1139 aa30.01■■■□□ 2.39
CD47-202ENST00000361309 SLC15A2Q16348 729 aa30■■■□□ 2.39
CD47-202ENST00000361309 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
CD47-202ENST00000361309 ACSBG1Q96GR2 724 aa30■■■□□ 2.39
CD47-202ENST00000361309 ATF5Q9Y2D1 282 aaPredicted RBP30■■■□□ 2.39
CD47-202ENST00000361309 BTAF1O14981 1849 aa29.99■■■□□ 2.39
CD47-202ENST00000361309 IL2RBP14784 551 aa29.98■■■□□ 2.39
CD47-202ENST00000361309 PTGER2P43116 358 aa29.98■■■□□ 2.39
CD47-202ENST00000361309 EDC4Q6P2E9 1401 aaKnown RBP29.97■■■□□ 2.39
CD47-202ENST00000361309 ANKRD24Q8TF21 1146 aa29.97■■■□□ 2.39
CD47-202ENST00000361309 A0A1W2PP64 1363 aa29.93■■■□□ 2.38
CD47-202ENST00000361309 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
CD47-202ENST00000361309 PAPPAQ13219 1627 aa29.92■■■□□ 2.38
CD47-202ENST00000361309 MTFR1LQ9H019 292 aa29.9■■■□□ 2.38
CD47-202ENST00000361309 FAM208AQ9UK61 1670 aaKnown RBP29.89■■■□□ 2.38
CD47-202ENST00000361309 TONSLQ96HA7 1378 aa29.89■■■□□ 2.37
CD47-202ENST00000361309 PUS7Q96PZ0 661 aaKnown RBP29.88■■■□□ 2.37
CD47-202ENST00000361309 IP6K1Q92551 441 aa29.86■■■□□ 2.37
CD47-202ENST00000361309 SGIP1Q9BQI5 828 aa29.86■■■□□ 2.37
CD47-202ENST00000361309 FHDC1Q9C0D6 1143 aaPredicted RBP29.86■■■□□ 2.37
CD47-202ENST00000361309 SYT17Q9BSW7 474 aa29.85■■■□□ 2.37
CD47-202ENST00000361309 RGPD2P0DJD1 1756 aa29.85■■■□□ 2.37
CD47-202ENST00000361309 LTV1Q96GA3 475 aaPredicted RBP29.84■■■□□ 2.37
CD47-202ENST00000361309 UTRNP46939 3433 aa29.84■■■□□ 2.37
CD47-202ENST00000361309 CHD4Q14839 1912 aa29.83■■■□□ 2.37
CD47-202ENST00000361309 DDX54Q8TDD1 881 aaKnown RBP29.82■■■□□ 2.36
CD47-202ENST00000361309 LRRC4BQ9NT99 713 aa29.82■■■□□ 2.36
CD47-202ENST00000361309 ZNF827Q17R98 1081 aa29.81■■■□□ 2.36
CD47-202ENST00000361309 TESK2Q96S53 571 aa29.8■■■□□ 2.36
CD47-202ENST00000361309 QSER1Q2KHR3 1735 aa29.79■■■□□ 2.36
CD47-202ENST00000361309 ST20-MTHFSA0A0A6YYL1 179 aa29.78■■■□□ 2.36
CD47-202ENST00000361309 COG3Q96JB2 828 aa29.78■■■□□ 2.36
CD47-202ENST00000361309 ARXQ96QS3 562 aa29.78■■■□□ 2.36
CD47-202ENST00000361309 DOT1LQ8TEK3 1739 aa29.78■■■□□ 2.36
CD47-202ENST00000361309 MAP3K19Q56UN5 1328 aa29.77■■■□□ 2.36
CD47-202ENST00000361309 SHANK3Q9BYB0 1731 aa29.77■■■□□ 2.36
CD47-202ENST00000361309 TUBGCP6Q96RT7 1819 aa29.76■■■□□ 2.35
CD47-202ENST00000361309 FBLN1P23142 703 aa29.76■■■□□ 2.35
CD47-202ENST00000361309 HOXC9P31274 260 aa29.76■■■□□ 2.35
CD47-202ENST00000361309 AMPHP49418 695 aa29.74■■■□□ 2.35
CD47-202ENST00000361309 AKT1S1Q96B36 256 aa29.74■■■□□ 2.35
CD47-202ENST00000361309 SLC27A3Q5K4L6 730 aa29.73■■■□□ 2.35
CD47-202ENST00000361309 LY75O60449 1722 aa29.73■■■□□ 2.35
CD47-202ENST00000361309 SYTL4Q96C24 671 aaPredicted RBP29.72■■■□□ 2.35
CD47-202ENST00000361309 PRIM1P49642 420 aaKnown RBP29.71■■■□□ 2.35
CD47-202ENST00000361309 COL24A1Q17RW2 1714 aa29.71■■■□□ 2.35
CD47-202ENST00000361309 MAP3K5Q99683 1374 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms