RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SALL2Q9Y467 1007 aaPredicted RBP10.5□□□□□ -0.73
CCL28-201ENST00000361115 CCDC7Q96M83 1385 aa10.49□□□□□ -0.73
CCL28-201ENST00000361115 FAM83GA6ND36 823 aa10.49□□□□□ -0.73
CCL28-201ENST00000361115 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
CCL28-201ENST00000361115 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
CCL28-201ENST00000361115 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
CCL28-201ENST00000361115 COL5A2P05997 1499 aaPredicted RBP10.48□□□□□ -0.73
CCL28-201ENST00000361115 TCP11L2Q8N4U5 519 aa10.48□□□□□ -0.73
CCL28-201ENST00000361115 MPHOSPH9Q99550 1183 aa10.47□□□□□ -0.73
CCL28-201ENST00000361115 HNRNPUQ00839 825 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCL28-201ENST00000361115 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
CCL28-201ENST00000361115 POGKQ9P215 609 aa10.47□□□□□ -0.73
CCL28-201ENST00000361115 YY1P25490 414 aa10.46□□□□□ -0.74
CCL28-201ENST00000361115 NOP58Q9Y2X3 529 aaKnown RBP10.46□□□□□ -0.74
CCL28-201ENST00000361115 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.74
CCL28-201ENST00000361115 DEFB132Q7Z7B7 95 aa10.45□□□□□ -0.74
CCL28-201ENST00000361115 PRDM11Q9NQV5 511 aa10.45□□□□□ -0.74
CCL28-201ENST00000361115 SLC16A10Q8TF71 515 aa10.45□□□□□ -0.74
CCL28-201ENST00000361115 PKNOX2Q96KN3 472 aa10.45□□□□□ -0.74
CCL28-201ENST00000361115 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
CCL28-201ENST00000361115 MYOM1P52179 1685 aa10.45□□□□□ -0.74
CCL28-201ENST00000361115 PDE3BQ13370 1112 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 NLRP13Q86W25 1043 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 PPP4R2Q9NY27 417 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 PRAM1Q96QH2 718 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 TNS2Q63HR2 1409 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 MON2Q7Z3U7 1717 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 TTC21AQ8NDW8 1320 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
CCL28-201ENST00000361115 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
CCL28-201ENST00000361115 B4GALNT3Q6L9W6 998 aa10.43□□□□□ -0.74
CCL28-201ENST00000361115 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
CCL28-201ENST00000361115 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
CCL28-201ENST00000361115 PUS7Q96PZ0 661 aaKnown RBP10.42□□□□□ -0.74
CCL28-201ENST00000361115 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
CCL28-201ENST00000361115 SBNO2Q9Y2G9 1366 aa10.42□□□□□ -0.74
CCL28-201ENST00000361115 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
CCL28-201ENST00000361115 IL27Q8NEV9 243 aa10.41□□□□□ -0.74
CCL28-201ENST00000361115 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
CCL28-201ENST00000361115 APBA3O96018 575 aa10.41□□□□□ -0.74
CCL28-201ENST00000361115 ERICH6BQ5W0A0 696 aa10.41□□□□□ -0.74
CCL28-201ENST00000361115 NGDNQ8NEJ9 315 aaKnown RBP10.41□□□□□ -0.74
CCL28-201ENST00000361115 CPSF1Q10570 1443 aaKnown RBP10.41□□□□□ -0.74
CCL28-201ENST00000361115 CICQ96RK0 1608 aaPredicted RBP10.41□□□□□ -0.74
CCL28-201ENST00000361115 R3HDM1Q15032 1099 aaKnown RBP10.4□□□□□ -0.74
CCL28-201ENST00000361115 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.74
CCL28-201ENST00000361115 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
CCL28-201ENST00000361115 USP31Q70CQ4 1352 aa10.4□□□□□ -0.74
CCL28-201ENST00000361115 USP6P35125 1406 aa10.4□□□□□ -0.75
CCL28-201ENST00000361115 EZH2Q15910 746 aaKnown RBP10.4□□□□□ -0.75
CCL28-201ENST00000361115 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.75
CCL28-201ENST00000361115 PRR36Q9H6K5 1346 aa10.39□□□□□ -0.75
CCL28-201ENST00000361115 MTFR1LQ9H019 292 aa10.39□□□□□ -0.75
CCL28-201ENST00000361115 STK32BQ9NY57 414 aa10.39□□□□□ -0.75
CCL28-201ENST00000361115 LY75O60449 1722 aa10.39□□□□□ -0.75
CCL28-201ENST00000361115 STK26Q9P289 416 aa10.38□□□□□ -0.75
CCL28-201ENST00000361115 NFAT5O94916 1531 aa10.38□□□□□ -0.75
CCL28-201ENST00000361115 NUDT16Q96DE0 195 aaKnown RBP10.38□□□□□ -0.75
CCL28-201ENST00000361115 WDR17Q8IZU2 1322 aa10.38□□□□□ -0.75
CCL28-201ENST00000361115 EVA1CP58658 441 aa10.38□□□□□ -0.75
CCL28-201ENST00000361115 ZNF831Q5JPB2 1677 aa10.37□□□□□ -0.75
CCL28-201ENST00000361115 SLC27A3Q5K4L6 730 aa10.37□□□□□ -0.75
CCL28-201ENST00000361115 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
CCL28-201ENST00000361115 A0A0G2JS52 829 aa10.36□□□□□ -0.75
CCL28-201ENST00000361115 CFAP70Q5T0N1 1121 aa10.36□□□□□ -0.75
CCL28-201ENST00000361115 PPIP5K1Q6PFW1 1433 aa10.35□□□□□ -0.75
CCL28-201ENST00000361115 XPCQ01831 940 aaPredicted RBP10.35□□□□□ -0.75
CCL28-201ENST00000361115 CCDC184Q52MB2 194 aa10.35□□□□□ -0.75
CCL28-201ENST00000361115 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
CCL28-201ENST00000361115 PSDA5PKW4 1024 aaPredicted RBP10.34□□□□□ -0.75
CCL28-201ENST00000361115 TRIM37O94972 964 aa10.34□□□□□ -0.75
CCL28-201ENST00000361115 TMEM132EQ6IEE7 984 aa10.34□□□□□ -0.75
CCL28-201ENST00000361115 GRIN3BO60391 1043 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 DDB1Q16531 1140 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
CCL28-201ENST00000361115 BTAF1O14981 1849 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 KIF24Q5T7B8 1368 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 PDIA4P13667 645 aaKnown RBP10.33□□□□□ -0.76
CCL28-201ENST00000361115 ACEP12821 1306 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
CCL28-201ENST00000361115 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
CCL28-201ENST00000361115 RTL1A6NKG5 1358 aa10.32□□□□□ -0.76
CCL28-201ENST00000361115 C10orf71Q711Q0 1435 aa10.32□□□□□ -0.76
CCL28-201ENST00000361115 SHANK3Q9BYB0 1731 aa10.32□□□□□ -0.76
CCL28-201ENST00000361115 NSD2O96028 1365 aa10.32□□□□□ -0.76
CCL28-201ENST00000361115 FLAD1Q8NFF5 587 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 SLC15A2Q16348 729 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 GCP02774 474 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 CDK19Q9BWU1 502 aa10.31□□□□□ -0.76
CCL28-201ENST00000361115 C1QTNF8P60827 252 aa10.3□□□□□ -0.76
CCL28-201ENST00000361115 EVC2Q86UK5 1308 aa10.3□□□□□ -0.76
CCL28-201ENST00000361115 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
CCL28-201ENST00000361115 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
CCL28-201ENST00000361115 PMFBP1Q8TBY8 1022 aa10.3□□□□□ -0.76
CCL28-201ENST00000361115 PTGER2P43116 358 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms