RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 ZFYVE27Q5T4F4 411 aa14.54□□□□□ -0.08
CCDC144A-204ENST00000360524 LETM1O95202 739 aaPredicted RBP14.54□□□□□ -0.08
CCDC144A-204ENST00000360524 CABP4P57796 275 aa14.54□□□□□ -0.08
CCDC144A-204ENST00000360524 GCC1Q96CN9 775 aa14.54□□□□□ -0.08
CCDC144A-204ENST00000360524 ERBINQ96RT1 1412 aa14.54□□□□□ -0.08
CCDC144A-204ENST00000360524 ODF2Q5BJF6 829 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 HDGFL1Q5TGJ6 251 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 SLC4A2P04920 1241 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 TSPYL1Q9H0U9 437 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 RPGRIP1LQ68CZ1 1315 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 OFD1O75665 1012 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 DCTN1Q14203 1278 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 TTC39AQ5SRH9 613 aa14.53□□□□□ -0.08
CCDC144A-204ENST00000360524 KINO60870 393 aaKnown RBP14.52□□□□□ -0.08
CCDC144A-204ENST00000360524 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.08
CCDC144A-204ENST00000360524 SPG7Q9UQ90 795 aa14.52□□□□□ -0.08
CCDC144A-204ENST00000360524 PLCD4Q9BRC7 762 aa14.52□□□□□ -0.08
CCDC144A-204ENST00000360524 CNNM1Q9NRU3 951 aa14.52□□□□□ -0.08
CCDC144A-204ENST00000360524 DAPK1P53355 1430 aa14.52□□□□□ -0.09
CCDC144A-204ENST00000360524 TOP2BQ02880 1626 aa14.52□□□□□ -0.09
CCDC144A-204ENST00000360524 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
CCDC144A-204ENST00000360524 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.09
CCDC144A-204ENST00000360524 PRDM10Q9NQV6 1147 aa14.52□□□□□ -0.09
CCDC144A-204ENST00000360524 SLC3A2P08195 630 aaKnown RBP14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 CCT4P50991 539 aaKnown RBP14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 ZNF530Q6P9A1 599 aaPredicted RBP14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 ANKLE2Q86XL3 938 aa14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 SIL1Q9H173 461 aa14.51□□□□□ -0.09
CCDC144A-204ENST00000360524 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 ERICH4A6NGS2 130 aa14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 MBD3O95983 291 aa14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 RABEP1Q15276 862 aa14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 GNL3LQ9NVN8 582 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 SUPT6HQ7KZ85 1726 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 ZMYND15Q9H091 742 aa14.5□□□□□ -0.09
CCDC144A-204ENST00000360524 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 WDR63Q8IWG1 891 aa14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 TIAM1Q13009 1591 aa14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 DDX54Q8TDD1 881 aaKnown RBP14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 CT47B1P0C2W7 299 aaPredicted RBP14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 ATAD2Q6PL18 1390 aa14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
CCDC144A-204ENST00000360524 MCM2P49736 904 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 DEF6Q9H4E7 631 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 STK38Q15208 465 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 CCDC112Q8NEF3 446 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 SRCIN1Q9C0H9 1055 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 ANKRD30BQ9BXX2 1392 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
CCDC144A-204ENST00000360524 AXDND1Q5T1B0 1012 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 MAGEC2Q9UBF1 373 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 SERPINC1P01008 464 aa14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 AEBP1Q8IUX7 1158 aa14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 FAM177A1Q8N128 213 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 ZNF396Q96N95 335 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 LRRCC1Q9C099 1032 aa14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 K7ELQ4 463 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
CCDC144A-204ENST00000360524 NUTM2BA6NNL0 878 aaPredicted RBP14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 NUTM2EB1AL46 878 aaPredicted RBP14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 NUTM2AQ8IVF1 878 aaPredicted RBP14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 DHX37Q8IY37 1157 aaKnown RBP14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 SMARCE1Q969G3 411 aa14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 TNMDQ9H2S6 317 aa14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 FILIP1LQ4L180 1135 aa14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
CCDC144A-204ENST00000360524 BACH2Q9BYV9 841 aa14.46□□□□□ -0.1
CCDC144A-204ENST00000360524 PDCP20941 246 aa14.46□□□□□ -0.1
CCDC144A-204ENST00000360524 PDCL2Q8N4E4 241 aa14.46□□□□□ -0.1
CCDC144A-204ENST00000360524 MYL6BP14649 208 aa14.45□□□□□ -0.1
CCDC144A-204ENST00000360524 CYP46A1Q9Y6A2 500 aa14.45□□□□□ -0.1
CCDC144A-204ENST00000360524 KIAA0754O94854 1291 aa14.45□□□□□ -0.1
CCDC144A-204ENST00000360524 CBX1P83916 185 aa14.45□□□□□ -0.1
CCDC144A-204ENST00000360524 CCDC184Q52MB2 194 aa14.44□□□□□ -0.1
CCDC144A-204ENST00000360524 CCP110O43303 1012 aa14.44□□□□□ -0.1
CCDC144A-204ENST00000360524 USP8P40818 1118 aa14.44□□□□□ -0.1
CCDC144A-204ENST00000360524 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
CCDC144A-204ENST00000360524 PDCL3Q9H2J4 239 aa14.44□□□□□ -0.1
CCDC144A-204ENST00000360524 ME1P48163 572 aa14.44□□□□□ -0.1
CCDC144A-204ENST00000360524 BTBD11A6QL63 1104 aa14.43□□□□□ -0.1
CCDC144A-204ENST00000360524 CCDC192P0DO97 292 aa14.43□□□□□ -0.1
CCDC144A-204ENST00000360524 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
CCDC144A-204ENST00000360524 PRDM11Q9NQV5 511 aa14.43□□□□□ -0.1
CCDC144A-204ENST00000360524 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
CCDC144A-204ENST00000360524 NACAP1Q9BZK3 213 aa14.43□□□□□ -0.1
CCDC144A-204ENST00000360524 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 ZSCAN30Q86W11 494 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 CHD1LQ86WJ1 897 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 TXLNAP40222 546 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 MVPQ14764 893 aaKnown RBP14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 TMEM132AQ24JP5 1023 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms