RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
SRGAP3-201ENST00000360413 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.07
SRGAP3-201ENST00000360413 CCDC148Q8NFR7 591 aa15.52■□□□□ 0.07
SRGAP3-201ENST00000360413 HMGB1P1B2RPK0 211 aaPredicted RBP15.52■□□□□ 0.07
SRGAP3-201ENST00000360413 MCM3P25205 808 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 STK38Q15208 465 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 SPATA24Q86W54 205 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 KIF18AQ8NI77 898 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 KDM4AO75164 1064 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 MCM4P33991 863 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 ANKRD18BA2A2Z9 1011 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
SRGAP3-201ENST00000360413 WDR33Q9C0J8 1336 aaKnown RBP15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 CDKL5O76039 1030 aa15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 DNAAF4Q8WXU2 420 aa15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 K7ELQ4 463 aaPredicted RBP15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 FILIP1Q7Z7B0 1213 aa15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 CASQ1P31415 396 aa15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 GNAI1P63096 354 aa15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 NACAP1Q9BZK3 213 aa15.5■□□□□ 0.07
SRGAP3-201ENST00000360413 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 ME1P48163 572 aa15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 KIAA1328Q86T90 577 aa15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 ST20-MTHFSA0A0A6YYL1 179 aa15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 EIF2S2P20042 333 aaKnown RBP15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 BACH2Q9BYV9 841 aa15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
SRGAP3-201ENST00000360413 SYCE3A1L190 88 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 EPB41L2O43491 1005 aaKnown RBP15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 WASHC4Q2M389 1173 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 ATF3P18847 181 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 ARHGAP29Q52LW3 1261 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 KRT85P78386 507 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 ZNF287Q9HBT7 754 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 CFAP57Q96MR6 1250 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 CCDC113Q9H0I3 377 aa15.48■□□□□ 0.07
SRGAP3-201ENST00000360413 DYNC1I1O14576 645 aa15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 ATP2B1P20020 1258 aa15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 SF3B2Q13435 895 aaKnown RBP15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 LUZP1Q86V48 1076 aa15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 ANAPC15P60006 121 aa15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 ZNF397Q8NF99 534 aaPredicted RBP15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 RIC3Q7Z5B4 369 aa15.47■□□□□ 0.07
SRGAP3-201ENST00000360413 LMAN1P49257 510 aa15.46■□□□□ 0.07
SRGAP3-201ENST00000360413 TNIP1Q15025 636 aa15.46■□□□□ 0.07
SRGAP3-201ENST00000360413 NUP62CLQ9H1M0 184 aa15.46■□□□□ 0.07
SRGAP3-201ENST00000360413 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
SRGAP3-201ENST00000360413 RIPK4P57078 832 aa15.46■□□□□ 0.06
SRGAP3-201ENST00000360413 UPF3BQ9BZI7 483 aaKnown RBP15.46■□□□□ 0.06
SRGAP3-201ENST00000360413 USP47Q96K76 1375 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 CEP57L1Q8IYX8 460 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 CUX1P39880 1505 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 CCDC150Q8NCX0 1101 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 CCDC57Q2TAC2 916 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 NOL7Q9UMY1 257 aaKnown RBP15.45■□□□□ 0.06
SRGAP3-201ENST00000360413 FERMT1Q9BQL6 677 aa15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 IMMTQ16891 758 aaKnown RBP15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 CLGNO14967 610 aa15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 VPS36Q86VN1 386 aa15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 ZSCAN12O43309 604 aa15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 NBPF1Q3BBV0 1214 aa15.44■□□□□ 0.06
SRGAP3-201ENST00000360413 SMTNL1A8MU46 457 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 DDX12PQ92771 950 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 GNAI3P08754 354 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 CCDC175P0C221 793 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 KIF5CO60282 957 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 TAF4BQ92750 862 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
SRGAP3-201ENST00000360413 SFPQP23246 707 aaKnown RBP eCLIP15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 URI1O94763 535 aaPredicted RBP15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 IFFO1Q0D2I5 559 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 SMARCC1Q92922 1105 aaPredicted RBP15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 FSD1Q9BTV5 496 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 WASF1Q92558 559 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 C16orf45Q96MC5 204 aaPredicted RBP15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 NEUROD6Q96NK8 337 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 MPHOSPH10O00566 681 aaKnown RBP15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
SRGAP3-201ENST00000360413 CFAP100Q494V2 611 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms