RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 AATKQ6ZMQ8 1374 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
SUDS3-201ENST00000360286 HOXC9P31274 260 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 AMPHP49418 695 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 IP6K1Q92551 441 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 PLCH1Q4KWH8 1693 aa8.75□□□□□ -1.01
SUDS3-201ENST00000360286 NSD2O96028 1365 aa8.74□□□□□ -1.01
SUDS3-201ENST00000360286 ANKRD26Q9UPS8 1709 aa8.74□□□□□ -1.01
SUDS3-201ENST00000360286 LTN1O94822 1766 aa8.74□□□□□ -1.01
SUDS3-201ENST00000360286 HSP90AB2PQ58FF8 381 aa8.74□□□□□ -1.01
SUDS3-201ENST00000360286 LARP1Q6PKG0 1096 aaKnown RBP8.74□□□□□ -1.01
SUDS3-201ENST00000360286 LTV1Q96GA3 475 aaPredicted RBP8.74□□□□□ -1.01
SUDS3-201ENST00000360286 TRPC5Q9UL62 973 aaPredicted RBP8.74□□□□□ -1.01
SUDS3-201ENST00000360286 CCDC9Q9Y3X0 531 aaKnown RBP8.74□□□□□ -1.01
SUDS3-201ENST00000360286 NPC1L1Q9UHC9 1359 aa8.73□□□□□ -1.01
SUDS3-201ENST00000360286 LMO7Q8WWI1 1683 aa8.73□□□□□ -1.01
SUDS3-201ENST00000360286 VPS72Q15906 364 aa8.73□□□□□ -1.01
SUDS3-201ENST00000360286 ANKRD24Q8TF21 1146 aa8.73□□□□□ -1.01
SUDS3-201ENST00000360286 GJD4Q96KN9 370 aaPredicted RBP8.73□□□□□ -1.01
SUDS3-201ENST00000360286 ATRNO75882 1429 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 NWD2Q9ULI1 1742 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 RXRBP28702 533 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 SPATA31A5Q5VU36 1347 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 SPATA31A7Q8IWB4 1347 aa8.72□□□□□ -1.01
SUDS3-201ENST00000360286 NRAPQ86VF7 1730 aa8.71□□□□□ -1.01
SUDS3-201ENST00000360286 PEAK1Q9H792 1746 aa8.71□□□□□ -1.01
SUDS3-201ENST00000360286 PPP2R1AP30153 589 aa8.71□□□□□ -1.02
SUDS3-201ENST00000360286 MTHFSP49914 203 aa8.71□□□□□ -1.02
SUDS3-201ENST00000360286 RBM6P78332 1123 aaKnown RBP8.71□□□□□ -1.02
SUDS3-201ENST00000360286 TOM1L2Q6ZVM7 507 aa8.71□□□□□ -1.02
SUDS3-201ENST00000360286 ILDR2Q71H61 639 aa8.71□□□□□ -1.02
SUDS3-201ENST00000360286 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
SUDS3-201ENST00000360286 FAM98CQ17RN3 349 aaKnown RBP8.7□□□□□ -1.02
SUDS3-201ENST00000360286 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
SUDS3-201ENST00000360286 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.7□□□□□ -1.02
SUDS3-201ENST00000360286 SPATA31A1Q5TZJ5 1347 aa8.7□□□□□ -1.02
SUDS3-201ENST00000360286 WDR17Q8IZU2 1322 aa8.7□□□□□ -1.02
SUDS3-201ENST00000360286 RGPD2P0DJD1 1756 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
SUDS3-201ENST00000360286 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 USHBP1Q8N6Y0 703 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 CARD10Q9BWT7 1032 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 ERBB3P21860 1342 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 INSRP06213 1382 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 FLT4P35916 1363 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 BLMP54132 1417 aaPredicted RBP8.69□□□□□ -1.02
SUDS3-201ENST00000360286 GLI3P10071 1580 aa8.69□□□□□ -1.02
SUDS3-201ENST00000360286 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
SUDS3-201ENST00000360286 RALBP1Q15311 655 aa8.68□□□□□ -1.02
SUDS3-201ENST00000360286 TCP11L2Q8N4U5 519 aa8.68□□□□□ -1.02
SUDS3-201ENST00000360286 KIF24Q5T7B8 1368 aa8.68□□□□□ -1.02
SUDS3-201ENST00000360286 PARD3Q8TEW0 1356 aa8.68□□□□□ -1.02
SUDS3-201ENST00000360286 CRB1P82279 1406 aa8.68□□□□□ -1.02
SUDS3-201ENST00000360286 A0A0G2JS52 829 aa8.67□□□□□ -1.02
SUDS3-201ENST00000360286 ABCC6O95255 1503 aa8.67□□□□□ -1.02
SUDS3-201ENST00000360286 IL13P35225 146 aa8.67□□□□□ -1.02
SUDS3-201ENST00000360286 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
SUDS3-201ENST00000360286 EYA1Q99502 592 aa8.67□□□□□ -1.02
SUDS3-201ENST00000360286 PRKRIP1Q9H875 184 aaPredicted RBP8.67□□□□□ -1.02
SUDS3-201ENST00000360286 THRAP3Q9Y2W1 955 aaKnown RBP8.67□□□□□ -1.02
SUDS3-201ENST00000360286 SMG6Q86US8 1419 aaKnown RBP8.66□□□□□ -1.02
SUDS3-201ENST00000360286 BARGINQ6ZT62 677 aa8.66□□□□□ -1.02
SUDS3-201ENST00000360286 DIAPH1O60610 1272 aaKnown RBP8.65□□□□□ -1.02
SUDS3-201ENST00000360286 RGS12O14924 1447 aa8.64□□□□□ -1.03
SUDS3-201ENST00000360286 ANP32CO43423 234 aa8.64□□□□□ -1.03
SUDS3-201ENST00000360286 IL2RBP14784 551 aa8.64□□□□□ -1.03
SUDS3-201ENST00000360286 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
SUDS3-201ENST00000360286 CDK12Q9NYV4 1490 aaPredicted RBP8.64□□□□□ -1.03
SUDS3-201ENST00000360286 BRWD3Q6RI45 1802 aa8.64□□□□□ -1.03
SUDS3-201ENST00000360286 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
SUDS3-201ENST00000360286 EXOC5O00471 708 aa8.63□□□□□ -1.03
SUDS3-201ENST00000360286 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
SUDS3-201ENST00000360286 HMOX1P09601 288 aa8.63□□□□□ -1.03
SUDS3-201ENST00000360286 CCDC184Q52MB2 194 aa8.63□□□□□ -1.03
SUDS3-201ENST00000360286 SULT6B1Q6IMI4 303 aa8.63□□□□□ -1.03
SUDS3-201ENST00000360286 AEBP1Q8IUX7 1158 aa8.63□□□□□ -1.03
SUDS3-201ENST00000360286 CFAP53Q96M91 514 aa8.63□□□□□ -1.03
SUDS3-201ENST00000360286 COL3A1P02461 1466 aaPredicted RBP8.63□□□□□ -1.03
SUDS3-201ENST00000360286 IGSF1Q8N6C5 1336 aa8.62□□□□□ -1.03
SUDS3-201ENST00000360286 TATP17735 454 aaPredicted RBP8.62□□□□□ -1.03
SUDS3-201ENST00000360286 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
SUDS3-201ENST00000360286 DDB1Q16531 1140 aa8.62□□□□□ -1.03
SUDS3-201ENST00000360286 KRT27Q7Z3Y8 459 aa8.62□□□□□ -1.03
SUDS3-201ENST00000360286 RAPGEF4Q8WZA2 1011 aa8.62□□□□□ -1.03
SUDS3-201ENST00000360286 CDCA7Q9BWT1 371 aaPredicted RBP8.62□□□□□ -1.03
SUDS3-201ENST00000360286 FAM208AQ9UK61 1670 aaKnown RBP8.62□□□□□ -1.03
SUDS3-201ENST00000360286 DISP2A7MBM2 1401 aa8.62□□□□□ -1.03
SUDS3-201ENST00000360286 DIEXFQ68CQ4 756 aaKnown RBP8.61□□□□□ -1.03
SUDS3-201ENST00000360286 MARCH10Q8NA82 808 aaPredicted RBP8.61□□□□□ -1.03
SUDS3-201ENST00000360286 ZCRB1Q8TBF4 217 aaKnown RBP8.61□□□□□ -1.03
SUDS3-201ENST00000360286 DDX54Q8TDD1 881 aaKnown RBP8.61□□□□□ -1.03
SUDS3-201ENST00000360286 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
SUDS3-201ENST00000360286 THSD7AQ9UPZ6 1657 aa8.61□□□□□ -1.03
SUDS3-201ENST00000360286 MEGF6O75095 1541 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms