RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TNPO1Q92973 898 aaKnown RBP10.35□□□□□ -0.75
COL6A6-201ENST00000358511 UBTFL1P0CB47 393 aaPredicted RBP10.35□□□□□ -0.75
COL6A6-201ENST00000358511 UPF3BQ9BZI7 483 aaKnown RBP10.35□□□□□ -0.75
COL6A6-201ENST00000358511 DDX58O95786 925 aaKnown RBP10.34□□□□□ -0.75
COL6A6-201ENST00000358511 BCAR3O75815 825 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 GTF2A1P52655 376 aaPredicted RBP10.34□□□□□ -0.75
COL6A6-201ENST00000358511 MICALCLQ6ZW33 695 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 SMTNL1A8MU46 457 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 TXLNAP40222 546 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 ENOX2Q16206 610 aaKnown RBP10.34□□□□□ -0.75
COL6A6-201ENST00000358511 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 GTF2F1P35269 517 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL6A6-201ENST00000358511 AMOTL1Q8IY63 956 aa10.34□□□□□ -0.75
COL6A6-201ENST00000358511 HS1BP3Q53T59 392 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
COL6A6-201ENST00000358511 RBM33Q96EV2 1170 aaKnown RBP10.33□□□□□ -0.76
COL6A6-201ENST00000358511 PPP2R1AP30153 589 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 CEBPZQ03701 1054 aaKnown RBP10.33□□□□□ -0.76
COL6A6-201ENST00000358511 BRPF1P55201 1214 aaPredicted RBP10.33□□□□□ -0.76
COL6A6-201ENST00000358511 SRCIN1Q9C0H9 1055 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
COL6A6-201ENST00000358511 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 IVLP07476 585 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 GNAI3P08754 354 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 TNNT1P13805 278 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 ARHGAP29Q52LW3 1261 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 LUZP1Q86V48 1076 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 TCP11L2Q8N4U5 519 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 ATF7IPQ6VMQ6 1270 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 ARAP1Q96P48 1450 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 PTPN23Q9H3S7 1636 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 CCDC148Q8NFR7 591 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 CLIP2Q9UDT6 1046 aa10.33□□□□□ -0.76
COL6A6-201ENST00000358511 CASQ1P31415 396 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 CTR9Q6PD62 1173 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 KIF3BO15066 747 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 C1orf141Q5JVX7 400 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 SMAP1Q8IYB5 467 aaPredicted RBP10.32□□□□□ -0.76
COL6A6-201ENST00000358511 JAKMIP3Q5VZ66 844 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 AK9Q5TCS8 1911 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 DHX29Q7Z478 1369 aaKnown RBP10.32□□□□□ -0.76
COL6A6-201ENST00000358511 TEFQ10587 303 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 STIM1Q13586 685 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 KLHL40Q2TBA0 621 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 CTDP1Q9Y5B0 961 aaPredicted RBP10.32□□□□□ -0.76
COL6A6-201ENST00000358511 CSB-PGBD3P0DP91 1061 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 WDR63Q8IWG1 891 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 FSD1Q9BTV5 496 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 CLASRPQ8N2M8 674 aaKnown RBP10.32□□□□□ -0.76
COL6A6-201ENST00000358511 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
COL6A6-201ENST00000358511 BMS1Q14692 1282 aaKnown RBP10.32□□□□□ -0.76
COL6A6-201ENST00000358511 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
COL6A6-201ENST00000358511 LRRFIP2Q9Y608 721 aaKnown RBP10.31□□□□□ -0.76
COL6A6-201ENST00000358511 GSDMDP57764 484 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 CCDC97Q96F63 343 aaPredicted RBP10.31□□□□□ -0.76
COL6A6-201ENST00000358511 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 CAVIN2O95810 425 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 XRCC6P12956 609 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL6A6-201ENST00000358511 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
COL6A6-201ENST00000358511 ANKRD50Q9ULJ7 1429 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 SLC26A8Q96RN1 970 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 KIF5CO60282 957 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 ADCY5O95622 1261 aa10.31□□□□□ -0.76
COL6A6-201ENST00000358511 SART3Q15020 963 aaKnown RBP10.31□□□□□ -0.76
COL6A6-201ENST00000358511 GNAI2P04899 355 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 KIF21AQ7Z4S6 1674 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 MNAT1P51948 309 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 NGDNQ8NEJ9 315 aaKnown RBP10.3□□□□□ -0.76
COL6A6-201ENST00000358511 PHF23Q9BUL5 403 aaPredicted RBP10.3□□□□□ -0.76
COL6A6-201ENST00000358511 ERC1Q8IUD2 1116 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
COL6A6-201ENST00000358511 LRPPRCP42704 1394 aaKnown RBP10.3□□□□□ -0.76
COL6A6-201ENST00000358511 IPO4Q8TEX9 1081 aaKnown RBP10.3□□□□□ -0.76
COL6A6-201ENST00000358511 TOP2BQ02880 1626 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 SEPT7Q16181 437 aaKnown RBP10.3□□□□□ -0.76
COL6A6-201ENST00000358511 TSPYL4Q9UJ04 414 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 TRERF1Q96PN7 1200 aa10.3□□□□□ -0.76
COL6A6-201ENST00000358511 GOLGA6L10A0A0M3HER8 536 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 KIF20AO95235 890 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
COL6A6-201ENST00000358511 SCAND2PQ9GZW5 306 aaPredicted RBP10.29□□□□□ -0.76
COL6A6-201ENST00000358511 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 RAD21O60216 631 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 CFAP100Q494V2 611 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
COL6A6-201ENST00000358511 LMAN1P49257 510 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 ZSCAN23Q3MJ62 389 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 CCDC171Q6TFL3 1326 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 DNAAF4Q8WXU2 420 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 GOLGA6L9A6NEM1 432 aa10.29□□□□□ -0.76
COL6A6-201ENST00000358511 CEP135Q66GS9 1140 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 TBC1D32Q96NH3 1257 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 CFTRP13569 1480 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms