RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 LARP1Q6PKG0 1096 aaKnown RBP28.7■■■□□ 2.18
PPP1CA-202ENST00000358239 THRAP3Q9Y2W1 955 aaKnown RBP28.7■■■□□ 2.18
PPP1CA-202ENST00000358239 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
PPP1CA-202ENST00000358239 ARHGEF25Q86VW2 580 aa28.69■■■□□ 2.18
PPP1CA-202ENST00000358239 MYOM1P52179 1685 aa28.68■■■□□ 2.18
PPP1CA-202ENST00000358239 TCP11L2Q8N4U5 519 aa28.68■■■□□ 2.18
PPP1CA-202ENST00000358239 USP35Q9P2H5 1018 aa28.68■■■□□ 2.18
PPP1CA-202ENST00000358239 ANKRD36BQ8N2N9 1353 aa28.67■■■□□ 2.18
PPP1CA-202ENST00000358239 NME9Q86XW9 330 aa28.67■■■□□ 2.18
PPP1CA-202ENST00000358239 KIF20BQ96Q89 1820 aa28.66■■■□□ 2.18
PPP1CA-202ENST00000358239 OVOS2A0A0J9YW53 1432 aa28.65■■■□□ 2.18
PPP1CA-202ENST00000358239 OVOS2Q6IE36 1432 aa28.65■■■□□ 2.18
PPP1CA-202ENST00000358239 SOX12O15370 315 aa28.64■■■□□ 2.18
PPP1CA-202ENST00000358239 SF3B2Q13435 895 aaKnown RBP28.64■■■□□ 2.18
PPP1CA-202ENST00000358239 TNS1Q9HBL0 1735 aaKnown RBP28.63■■■□□ 2.17
PPP1CA-202ENST00000358239 WDR17Q8IZU2 1322 aa28.63■■■□□ 2.17
PPP1CA-202ENST00000358239 ZRANB1Q9UGI0 708 aa28.62■■■□□ 2.17
PPP1CA-202ENST00000358239 AXIN2Q9Y2T1 843 aa28.61■■■□□ 2.17
PPP1CA-202ENST00000358239 LRRC37A3O60309 1634 aa28.61■■■□□ 2.17
PPP1CA-202ENST00000358239 FAM208AQ9UK61 1670 aaKnown RBP28.6■■■□□ 2.17
PPP1CA-202ENST00000358239 TOM1L2Q6ZVM7 507 aa28.59■■■□□ 2.17
PPP1CA-202ENST00000358239 PDE3BQ13370 1112 aa28.57■■■□□ 2.16
PPP1CA-202ENST00000358239 SBF2Q86WG5 1849 aa28.55■■■□□ 2.16
PPP1CA-202ENST00000358239 FAM196AQ6ZSG2 479 aa28.55■■■□□ 2.16
PPP1CA-202ENST00000358239 COG3Q96JB2 828 aa28.54■■■□□ 2.16
PPP1CA-202ENST00000358239 CDCA7Q9BWT1 371 aaPredicted RBP28.54■■■□□ 2.16
PPP1CA-202ENST00000358239 CSB-PGBD3P0DP91 1061 aa28.53■■■□□ 2.16
PPP1CA-202ENST00000358239 CARD10Q9BWT7 1032 aa28.53■■■□□ 2.16
PPP1CA-202ENST00000358239 PEAK1Q9H792 1746 aa28.52■■■□□ 2.16
PPP1CA-202ENST00000358239 EIF4G2P78344 907 aaKnown RBP eCLIP28.52■■■□□ 2.16
PPP1CA-202ENST00000358239 FAM182BQ5T319 152 aa28.52■■■□□ 2.16
PPP1CA-202ENST00000358239 CCDC7Q96M83 1385 aa28.51■■■□□ 2.16
PPP1CA-202ENST00000358239 C11orf95C9JLR9 678 aaPredicted RBP28.51■■■□□ 2.15
PPP1CA-202ENST00000358239 BAG6P46379 1132 aa28.51■■■□□ 2.15
PPP1CA-202ENST00000358239 DISP2A7MBM2 1401 aa28.5■■■□□ 2.15
PPP1CA-202ENST00000358239 ERBB3P21860 1342 aa28.49■■■□□ 2.15
PPP1CA-202ENST00000358239 DEFB132Q7Z7B7 95 aa28.49■■■□□ 2.15
PPP1CA-202ENST00000358239 OVOS2A0A0G2JMS6 1433 aa28.46■■■□□ 2.15
PPP1CA-202ENST00000358239 DDB1Q16531 1140 aa28.46■■■□□ 2.15
PPP1CA-202ENST00000358239 FYB1O15117 783 aa28.45■■■□□ 2.14
PPP1CA-202ENST00000358239 ANKRD26Q9UPS8 1709 aa28.44■■■□□ 2.14
PPP1CA-202ENST00000358239 RGPD3A6NKT7 1758 aaPredicted RBP28.43■■■□□ 2.14
PPP1CA-202ENST00000358239 RGPD2P0DJD1 1756 aa28.43■■■□□ 2.14
PPP1CA-202ENST00000358239 RGPD4Q7Z3J3 1758 aa28.43■■■□□ 2.14
PPP1CA-202ENST00000358239 IP6K1Q92551 441 aa28.43■■■□□ 2.14
PPP1CA-202ENST00000358239 HSPA5P11021 654 aaKnown RBP28.42■■■□□ 2.14
PPP1CA-202ENST00000358239 NSD3Q9BZ95 1437 aa28.42■■■□□ 2.14
PPP1CA-202ENST00000358239 RTL1A6NKG5 1358 aa28.41■■■□□ 2.14
PPP1CA-202ENST00000358239 TRIM37O94972 964 aa28.41■■■□□ 2.14
PPP1CA-202ENST00000358239 ANKRD24Q8TF21 1146 aa28.41■■■□□ 2.14
PPP1CA-202ENST00000358239 RREB1Q92766 1687 aa28.41■■■□□ 2.14
PPP1CA-202ENST00000358239 MAP2P11137 1827 aaKnown RBP28.41■■■□□ 2.14
PPP1CA-202ENST00000358239 GGNBP2Q9H3C7 697 aa28.4■■■□□ 2.14
PPP1CA-202ENST00000358239 MAP3K19Q56UN5 1328 aa28.4■■■□□ 2.14
PPP1CA-202ENST00000358239 PARD3Q8TEW0 1356 aa28.39■■■□□ 2.14
PPP1CA-202ENST00000358239 NLRP2Q9NX02 1062 aa28.39■■■□□ 2.14
PPP1CA-202ENST00000358239 BCL9O00512 1426 aa28.38■■■□□ 2.13
PPP1CA-202ENST00000358239 TNS2Q63HR2 1409 aa28.38■■■□□ 2.13
PPP1CA-202ENST00000358239 CARD14Q9BXL6 1004 aa28.38■■■□□ 2.13
PPP1CA-202ENST00000358239 KAT6BQ8WYB5 2073 aa28.38■■■□□ 2.13
PPP1CA-202ENST00000358239 EN1Q05925 392 aaPredicted RBP28.37■■■□□ 2.13
PPP1CA-202ENST00000358239 HOXC9P31274 260 aa28.36■■■□□ 2.13
PPP1CA-202ENST00000358239 AMPHP49418 695 aa28.36■■■□□ 2.13
PPP1CA-202ENST00000358239 EXOC5O00471 708 aa28.35■■■□□ 2.13
PPP1CA-202ENST00000358239 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
PPP1CA-202ENST00000358239 NUP188Q5SRE5 1749 aa28.34■■■□□ 2.13
PPP1CA-202ENST00000358239 APBA3O96018 575 aa28.33■■■□□ 2.13
PPP1CA-202ENST00000358239 IL2RBP14784 551 aa28.33■■■□□ 2.13
PPP1CA-202ENST00000358239 POLR3GLQ9BT43 218 aa28.33■■■□□ 2.13
PPP1CA-202ENST00000358239 CGNL1Q0VF96 1302 aa28.33■■■□□ 2.13
PPP1CA-202ENST00000358239 MARCH10Q8NA82 808 aaPredicted RBP28.31■■■□□ 2.12
PPP1CA-202ENST00000358239 NHSQ6T4R5 1651 aa28.3■■■□□ 2.12
PPP1CA-202ENST00000358239 SMG6Q86US8 1419 aaKnown RBP28.3■■■□□ 2.12
PPP1CA-202ENST00000358239 FBLN1P23142 703 aa28.3■■■□□ 2.12
PPP1CA-202ENST00000358239 CAMKK2Q96RR4 588 aa28.3■■■□□ 2.12
PPP1CA-202ENST00000358239 RRS1Q15050 365 aaKnown RBP28.29■■■□□ 2.12
PPP1CA-202ENST00000358239 LTV1Q96GA3 475 aaPredicted RBP28.29■■■□□ 2.12
PPP1CA-202ENST00000358239 FLT4P35916 1363 aa28.28■■■□□ 2.12
PPP1CA-202ENST00000358239 EZH2Q15910 746 aaKnown RBP28.28■■■□□ 2.12
PPP1CA-202ENST00000358239 SRCAPQ6ZRS2 3230 aa28.27■■■□□ 2.12
PPP1CA-202ENST00000358239 SHANK3Q9BYB0 1731 aa28.26■■■□□ 2.12
PPP1CA-202ENST00000358239 BCL11BQ9C0K0 894 aaPredicted RBP28.26■■■□□ 2.11
PPP1CA-202ENST00000358239 INSRP06213 1382 aa28.25■■■□□ 2.11
PPP1CA-202ENST00000358239 LRP5O75197 1615 aa28.22■■■□□ 2.11
PPP1CA-202ENST00000358239 BTAF1O14981 1849 aa28.22■■■□□ 2.11
PPP1CA-202ENST00000358239 NSD2O96028 1365 aa28.21■■■□□ 2.11
PPP1CA-202ENST00000358239 PLSCR1O15162 318 aa28.2■■■□□ 2.1
PPP1CA-202ENST00000358239 PANK3Q9H999 370 aa28.2■■■□□ 2.1
PPP1CA-202ENST00000358239 HSP90AB2PQ58FF8 381 aa28.18■■■□□ 2.1
PPP1CA-202ENST00000358239 DOT1LQ8TEK3 1739 aa28.17■■■□□ 2.1
PPP1CA-202ENST00000358239 NBPF6Q5VWK0 638 aa28.16■■■□□ 2.1
PPP1CA-202ENST00000358239 NBPF4Q96M43 638 aa28.16■■■□□ 2.1
PPP1CA-202ENST00000358239 EMILIN1Q9Y6C2 1016 aa28.16■■■□□ 2.1
PPP1CA-202ENST00000358239 MEGF6O75095 1541 aa28.16■■■□□ 2.1
PPP1CA-202ENST00000358239 PSDA5PKW4 1024 aaPredicted RBP28.14■■■□□ 2.1
PPP1CA-202ENST00000358239 NBPF14Q5TI25 921 aa28.14■■■□□ 2.1
PPP1CA-202ENST00000358239 PKD1L3Q7Z443 1732 aa28.13■■■□□ 2.09
PPP1CA-202ENST00000358239 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
PPP1CA-202ENST00000358239 WASHC2AQ641Q2 1341 aa28.13■■■□□ 2.09
PPP1CA-202ENST00000358239 PTF1AQ7RTS3 328 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms