RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
SMARCAL1-202ENST00000358207 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 TMEM132EQ6IEE7 984 aa11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 TNS1Q9HBL0 1735 aaKnown RBP11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 LMO7Q8WWI1 1683 aa11.93□□□□□ -0.5
SMARCAL1-202ENST00000358207 DMTNQ08495 405 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 TRPM1Q7Z4N2 1603 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 UTP14CQ5TAP6 766 aaKnown RBP11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 ARID3AQ99856 593 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 FAM13BQ9NYF5 915 aa11.92□□□□□ -0.5
SMARCAL1-202ENST00000358207 BCL9LQ86UU0 1499 aa11.91□□□□□ -0.5
SMARCAL1-202ENST00000358207 NPHP3Q7Z494 1330 aa11.91□□□□□ -0.5
SMARCAL1-202ENST00000358207 NRKQ7Z2Y5 1582 aa11.91□□□□□ -0.5
SMARCAL1-202ENST00000358207 RREB1Q92766 1687 aa11.91□□□□□ -0.5
SMARCAL1-202ENST00000358207 ZSCAN20P17040 1043 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-202ENST00000358207 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-202ENST00000358207 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.51
SMARCAL1-202ENST00000358207 STK26Q9P289 416 aa11.89□□□□□ -0.51
SMARCAL1-202ENST00000358207 PARP4Q9UKK3 1724 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-202ENST00000358207 CCDC7Q96M83 1385 aa11.88□□□□□ -0.51
SMARCAL1-202ENST00000358207 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-202ENST00000358207 MAP7D2Q96T17 732 aa11.88□□□□□ -0.51
SMARCAL1-202ENST00000358207 TRAK1Q9UPV9 953 aa11.88□□□□□ -0.51
SMARCAL1-202ENST00000358207 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
SMARCAL1-202ENST00000358207 GZF1Q9H116 711 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-202ENST00000358207 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 RBM6P78332 1123 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 C8orf34Q49A92 452 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 SECISBP2LQ93073 1101 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 AFF2P51816 1311 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 ATAD2Q6PL18 1390 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 SLIT3O75094 1523 aa11.86□□□□□ -0.51
SMARCAL1-202ENST00000358207 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-202ENST00000358207 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
SMARCAL1-202ENST00000358207 COL18A1P39060 1754 aa11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 ZBTB22O15209 634 aa11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 PEAK1Q9H792 1746 aa11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 PLEKHH1Q9ULM0 1364 aa11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 POLR3AO14802 1390 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 RXRBP28702 533 aa11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
SMARCAL1-202ENST00000358207 OFD1O75665 1012 aa11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 MRE11P49959 708 aa11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-202ENST00000358207 RBM33Q96EV2 1170 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-202ENST00000358207 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
SMARCAL1-202ENST00000358207 TEX2Q8IWB9 1127 aa11.82□□□□□ -0.52
SMARCAL1-202ENST00000358207 GRPEL1Q9HAV7 217 aa11.81□□□□□ -0.52
SMARCAL1-202ENST00000358207 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-202ENST00000358207 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
SMARCAL1-202ENST00000358207 ANTXR1Q9H6X2 564 aa11.8□□□□□ -0.52
SMARCAL1-202ENST00000358207 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-202ENST00000358207 TERF1P54274 439 aa11.8□□□□□ -0.52
SMARCAL1-202ENST00000358207 TRIM44Q96DX7 344 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-202ENST00000358207 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
SMARCAL1-202ENST00000358207 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
SMARCAL1-202ENST00000358207 MEX3CQ5U5Q3 659 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 QSER1Q2KHR3 1735 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 TESK2Q96S53 571 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 SBF2Q86WG5 1849 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 KIF20AO95235 890 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 ORAI2Q96SN7 254 aa11.78□□□□□ -0.52
SMARCAL1-202ENST00000358207 USP19O94966 1318 aa11.77□□□□□ -0.52
SMARCAL1-202ENST00000358207 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-202ENST00000358207 PSME1Q06323 249 aa11.77□□□□□ -0.53
SMARCAL1-202ENST00000358207 PANK3Q9H999 370 aa11.77□□□□□ -0.53
SMARCAL1-202ENST00000358207 CPDO75976 1380 aa11.77□□□□□ -0.53
SMARCAL1-202ENST00000358207 SBNO2Q9Y2G9 1366 aa11.77□□□□□ -0.53
SMARCAL1-202ENST00000358207 GPRASP1Q5JY77 1395 aa11.76□□□□□ -0.53
SMARCAL1-202ENST00000358207 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
SMARCAL1-202ENST00000358207 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
SMARCAL1-202ENST00000358207 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
SMARCAL1-202ENST00000358207 UQCRHP07919 91 aa11.75□□□□□ -0.53
SMARCAL1-202ENST00000358207 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
SMARCAL1-202ENST00000358207 VPS72Q15906 364 aa11.75□□□□□ -0.53
SMARCAL1-202ENST00000358207 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
SMARCAL1-202ENST00000358207 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
SMARCAL1-202ENST00000358207 BCL9O00512 1426 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms