RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PTF1AQ7RTS3 328 aa23.06■■□□□ 1.28
IFT20-202ENST00000357896 MARCH10Q8NA82 808 aaPredicted RBP23.06■■□□□ 1.28
IFT20-202ENST00000357896 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
IFT20-202ENST00000357896 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
IFT20-202ENST00000357896 SBF2Q86WG5 1849 aa23.05■■□□□ 1.28
IFT20-202ENST00000357896 WDR17Q8IZU2 1322 aa23.05■■□□□ 1.28
IFT20-202ENST00000357896 SYT17Q9BSW7 474 aa23.04■■□□□ 1.28
IFT20-202ENST00000357896 CABP2Q9NPB3 220 aa23.04■■□□□ 1.28
IFT20-202ENST00000357896 SLC15A2Q16348 729 aa23.03■■□□□ 1.28
IFT20-202ENST00000357896 TXNRD1Q16881 649 aa23.03■■□□□ 1.28
IFT20-202ENST00000357896 FHDC1Q9C0D6 1143 aaPredicted RBP23.02■■□□□ 1.28
IFT20-202ENST00000357896 MTFR1LQ9H019 292 aa23.02■■□□□ 1.28
IFT20-202ENST00000357896 CABP1Q9NZU7 370 aa23.02■■□□□ 1.28
IFT20-202ENST00000357896 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
IFT20-202ENST00000357896 USP6P35125 1406 aa23.01■■□□□ 1.27
IFT20-202ENST00000357896 SLIT3O75094 1523 aa23.01■■□□□ 1.27
IFT20-202ENST00000357896 KIAA1210Q9ULL0 1709 aa23■■□□□ 1.27
IFT20-202ENST00000357896 EXOC5O00471 708 aa23■■□□□ 1.27
IFT20-202ENST00000357896 CARD10Q9BWT7 1032 aa23■■□□□ 1.27
IFT20-202ENST00000357896 AXIN2Q9Y2T1 843 aa23■■□□□ 1.27
IFT20-202ENST00000357896 MYOM1P52179 1685 aa23■■□□□ 1.27
IFT20-202ENST00000357896 NBPF1Q3BBV0 1214 aa22.99■■□□□ 1.27
IFT20-202ENST00000357896 CSB-PGBD3P0DP91 1061 aa22.98■■□□□ 1.27
IFT20-202ENST00000357896 KCNH5Q8NCM2 988 aa22.98■■□□□ 1.27
IFT20-202ENST00000357896 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
IFT20-202ENST00000357896 ARHGEF25Q86VW2 580 aa22.97■■□□□ 1.27
IFT20-202ENST00000357896 COL18A1P39060 1754 aa22.95■■□□□ 1.26
IFT20-202ENST00000357896 C1QTNF8P60827 252 aa22.95■■□□□ 1.26
IFT20-202ENST00000357896 CPSF1Q10570 1443 aaKnown RBP22.95■■□□□ 1.26
IFT20-202ENST00000357896 SGIP1Q9BQI5 828 aa22.95■■□□□ 1.26
IFT20-202ENST00000357896 AKAP12Q02952 1782 aa22.94■■□□□ 1.26
IFT20-202ENST00000357896 ARXQ96QS3 562 aa22.93■■□□□ 1.26
IFT20-202ENST00000357896 ZNF692Q9BU19 519 aaPredicted RBP22.93■■□□□ 1.26
IFT20-202ENST00000357896 CCDC7Q96M83 1385 aa22.92■■□□□ 1.26
IFT20-202ENST00000357896 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
IFT20-202ENST00000357896 MAP3K5Q99683 1374 aa22.9■■□□□ 1.26
IFT20-202ENST00000357896 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
IFT20-202ENST00000357896 EVC2Q86UK5 1308 aa22.89■■□□□ 1.26
IFT20-202ENST00000357896 CHD4Q14839 1912 aa22.88■■□□□ 1.25
IFT20-202ENST00000357896 TTC21BQ7Z4L5 1316 aa22.88■■□□□ 1.25
IFT20-202ENST00000357896 SOX12O15370 315 aa22.88■■□□□ 1.25
IFT20-202ENST00000357896 TTC21AQ8NDW8 1320 aa22.87■■□□□ 1.25
IFT20-202ENST00000357896 TNS2Q63HR2 1409 aa22.87■■□□□ 1.25
IFT20-202ENST00000357896 QRICH2Q9H0J4 1663 aa22.87■■□□□ 1.25
IFT20-202ENST00000357896 GPR162Q16538 588 aa22.86■■□□□ 1.25
IFT20-202ENST00000357896 ACSBG1Q96GR2 724 aa22.84■■□□□ 1.25
IFT20-202ENST00000357896 TRPM1Q7Z4N2 1603 aa22.83■■□□□ 1.25
IFT20-202ENST00000357896 ABCC6O95255 1503 aa22.82■■□□□ 1.24
IFT20-202ENST00000357896 NHSQ6T4R5 1651 aa22.82■■□□□ 1.24
IFT20-202ENST00000357896 SLC16A10Q8TF71 515 aa22.82■■□□□ 1.24
IFT20-202ENST00000357896 RGPD5Q99666 1765 aa22.81■■□□□ 1.24
IFT20-202ENST00000357896 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
IFT20-202ENST00000357896 IL2RBP14784 551 aa22.8■■□□□ 1.24
IFT20-202ENST00000357896 POLD1P28340 1107 aa22.8■■□□□ 1.24
IFT20-202ENST00000357896 NLRP2Q9NX02 1062 aa22.8■■□□□ 1.24
IFT20-202ENST00000357896 NFAT5O94916 1531 aa22.79■■□□□ 1.24
IFT20-202ENST00000357896 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
IFT20-202ENST00000357896 PAPPAQ13219 1627 aa22.78■■□□□ 1.24
IFT20-202ENST00000357896 ERBB3P21860 1342 aa22.78■■□□□ 1.24
IFT20-202ENST00000357896 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
IFT20-202ENST00000357896 IFFO2Q5TF58 517 aa22.77■■□□□ 1.24
IFT20-202ENST00000357896 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
IFT20-202ENST00000357896 KLHL34Q8N239 644 aa22.76■■□□□ 1.23
IFT20-202ENST00000357896 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
IFT20-202ENST00000357896 AKT1S1Q96B36 256 aa22.75■■□□□ 1.23
IFT20-202ENST00000357896 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
IFT20-202ENST00000357896 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
IFT20-202ENST00000357896 BTAF1O14981 1849 aa22.72■■□□□ 1.23
IFT20-202ENST00000357896 USP31Q70CQ4 1352 aa22.72■■□□□ 1.23
IFT20-202ENST00000357896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
IFT20-202ENST00000357896 ANKRD24Q8TF21 1146 aa22.71■■□□□ 1.23
IFT20-202ENST00000357896 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
IFT20-202ENST00000357896 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
IFT20-202ENST00000357896 GRIN3BO60391 1043 aa22.69■■□□□ 1.22
IFT20-202ENST00000357896 L3MBTL2Q969R5 705 aa22.69■■□□□ 1.22
IFT20-202ENST00000357896 CEP350Q5VT06 3117 aa22.68■■□□□ 1.22
IFT20-202ENST00000357896 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
IFT20-202ENST00000357896 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
IFT20-202ENST00000357896 QSER1Q2KHR3 1735 aa22.65■■□□□ 1.22
IFT20-202ENST00000357896 NME9Q86XW9 330 aa22.65■■□□□ 1.22
IFT20-202ENST00000357896 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
IFT20-202ENST00000357896 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
IFT20-202ENST00000357896 SYTL4Q96C24 671 aaPredicted RBP22.63■■□□□ 1.21
IFT20-202ENST00000357896 COL24A1Q17RW2 1714 aa22.62■■□□□ 1.21
IFT20-202ENST00000357896 MON2Q7Z3U7 1717 aa22.62■■□□□ 1.21
IFT20-202ENST00000357896 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
IFT20-202ENST00000357896 SBNO2Q9Y2G9 1366 aa22.62■■□□□ 1.21
IFT20-202ENST00000357896 USP54Q70EL1 1684 aa22.62■■□□□ 1.21
IFT20-202ENST00000357896 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
IFT20-202ENST00000357896 LTN1O94822 1766 aa22.61■■□□□ 1.21
IFT20-202ENST00000357896 SHANK3Q9BYB0 1731 aa22.6■■□□□ 1.21
IFT20-202ENST00000357896 TMC1Q8TDI8 760 aa22.6■■□□□ 1.21
IFT20-202ENST00000357896 IP6K1Q92551 441 aa22.6■■□□□ 1.21
IFT20-202ENST00000357896 ANKRD36BQ8N2N9 1353 aa22.6■■□□□ 1.21
IFT20-202ENST00000357896 YBX3P16989 372 aaKnown RBP eCLIP22.59■■□□□ 1.21
IFT20-202ENST00000357896 KCNQ4P56696 695 aa22.59■■□□□ 1.21
IFT20-202ENST00000357896 MSH5O43196 834 aa22.58■■□□□ 1.21
IFT20-202ENST00000357896 HMGB2P26583 209 aaKnown RBP22.57■■□□□ 1.2
IFT20-202ENST00000357896 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
IFT20-202ENST00000357896 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms