RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
USP6-202ENST00000357482 TRPM3Q9HCF6 1732 aaPredicted RBP18.82■□□□□ 0.6
USP6-202ENST00000357482 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
USP6-202ENST00000357482 FRAT2O75474 233 aaPredicted RBP18.82■□□□□ 0.6
USP6-202ENST00000357482 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
USP6-202ENST00000357482 QRICH2Q9H0J4 1663 aa18.81■□□□□ 0.6
USP6-202ENST00000357482 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
USP6-202ENST00000357482 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
USP6-202ENST00000357482 GTF2E1P29083 439 aaPredicted RBP18.8■□□□□ 0.6
USP6-202ENST00000357482 UNC5CLQ8IV45 518 aa18.8■□□□□ 0.6
USP6-202ENST00000357482 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6
USP6-202ENST00000357482 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
USP6-202ENST00000357482 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
USP6-202ENST00000357482 CCDC9Q9Y3X0 531 aaKnown RBP18.78■□□□□ 0.6
USP6-202ENST00000357482 SLIT2O94813 1529 aa18.78■□□□□ 0.6
USP6-202ENST00000357482 ACEP12821 1306 aa18.78■□□□□ 0.6
USP6-202ENST00000357482 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
USP6-202ENST00000357482 TOPAZ1Q8N9V7 1692 aa18.77■□□□□ 0.6
USP6-202ENST00000357482 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.76■□□□□ 0.59
USP6-202ENST00000357482 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
USP6-202ENST00000357482 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
USP6-202ENST00000357482 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
USP6-202ENST00000357482 ISY1Q9ULR0 285 aaKnown RBP18.75■□□□□ 0.59
USP6-202ENST00000357482 POLR3AO14802 1390 aaPredicted RBP18.74■□□□□ 0.59
USP6-202ENST00000357482 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
USP6-202ENST00000357482 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
USP6-202ENST00000357482 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
USP6-202ENST00000357482 GOLGA6L3A6NEY3 463 aa18.74■□□□□ 0.59
USP6-202ENST00000357482 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
USP6-202ENST00000357482 ATAD2Q6PL18 1390 aa18.73■□□□□ 0.59
USP6-202ENST00000357482 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
USP6-202ENST00000357482 USP47Q96K76 1375 aa18.72■□□□□ 0.59
USP6-202ENST00000357482 FSD2A1L4K1 749 aa18.72■□□□□ 0.59
USP6-202ENST00000357482 ESPNB1AK53 854 aa18.72■□□□□ 0.59
USP6-202ENST00000357482 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
USP6-202ENST00000357482 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
USP6-202ENST00000357482 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
USP6-202ENST00000357482 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
USP6-202ENST00000357482 VPS72Q15906 364 aa18.7■□□□□ 0.58
USP6-202ENST00000357482 ABTB2Q8N961 1025 aa18.7■□□□□ 0.58
USP6-202ENST00000357482 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
USP6-202ENST00000357482 GLI3P10071 1580 aa18.7■□□□□ 0.58
USP6-202ENST00000357482 A0A0G2JS52 829 aa18.69■□□□□ 0.58
USP6-202ENST00000357482 COL14A1Q05707 1796 aaKnown RBP18.69■□□□□ 0.58
USP6-202ENST00000357482 XRCC6P12956 609 aaKnown RBP eCLIP18.68■□□□□ 0.58
USP6-202ENST00000357482 CRYBG1Q9Y4K1 1723 aa18.68■□□□□ 0.58
USP6-202ENST00000357482 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
USP6-202ENST00000357482 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
USP6-202ENST00000357482 MRE11P49959 708 aa18.67■□□□□ 0.58
USP6-202ENST00000357482 PHRF1Q9P1Y6 1649 aaKnown RBP18.67■□□□□ 0.58
USP6-202ENST00000357482 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
USP6-202ENST00000357482 KIAA0232Q92628 1395 aa18.66■□□□□ 0.58
USP6-202ENST00000357482 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
USP6-202ENST00000357482 TAF3Q5VWG9 929 aa18.66■□□□□ 0.58
USP6-202ENST00000357482 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
USP6-202ENST00000357482 PRKRIP1Q9H875 184 aaPredicted RBP18.66■□□□□ 0.58
USP6-202ENST00000357482 DMTNQ08495 405 aa18.65■□□□□ 0.58
USP6-202ENST00000357482 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
USP6-202ENST00000357482 NLRP13Q86W25 1043 aa18.64■□□□□ 0.58
USP6-202ENST00000357482 NRAPQ86VF7 1730 aa18.64■□□□□ 0.57
USP6-202ENST00000357482 KIF20AO95235 890 aa18.64■□□□□ 0.57
USP6-202ENST00000357482 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
USP6-202ENST00000357482 USP6P35125 1406 aa18.63■□□□□ 0.57
USP6-202ENST00000357482 FAM98CQ17RN3 349 aaKnown RBP18.62■□□□□ 0.57
USP6-202ENST00000357482 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
USP6-202ENST00000357482 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
USP6-202ENST00000357482 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
USP6-202ENST00000357482 BRD2P25440 801 aaKnown RBP18.61■□□□□ 0.57
USP6-202ENST00000357482 NLRP6P59044 892 aa18.61■□□□□ 0.57
USP6-202ENST00000357482 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
USP6-202ENST00000357482 FTSJ3Q8IY81 847 aaKnown RBP18.61■□□□□ 0.57
USP6-202ENST00000357482 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
USP6-202ENST00000357482 EVA1CP58658 441 aa18.6■□□□□ 0.57
USP6-202ENST00000357482 BRWD3Q6RI45 1802 aa18.59■□□□□ 0.57
USP6-202ENST00000357482 GCP02774 474 aa18.59■□□□□ 0.57
USP6-202ENST00000357482 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.59■□□□□ 0.57
USP6-202ENST00000357482 KIAA1211Q6ZU35 1233 aa18.59■□□□□ 0.57
USP6-202ENST00000357482 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
USP6-202ENST00000357482 GTPBP4Q9BZE4 634 aaKnown RBP18.59■□□□□ 0.57
USP6-202ENST00000357482 USP19O94966 1318 aa18.59■□□□□ 0.57
USP6-202ENST00000357482 KIF7Q2M1P5 1343 aa18.59■□□□□ 0.57
USP6-202ENST00000357482 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
USP6-202ENST00000357482 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.57
USP6-202ENST00000357482 RRP1P56182 461 aaKnown RBP18.58■□□□□ 0.56
USP6-202ENST00000357482 SPATA31A5Q5VU36 1347 aa18.58■□□□□ 0.56
USP6-202ENST00000357482 PAXIP1Q6ZW49 1069 aaPredicted RBP18.58■□□□□ 0.56
USP6-202ENST00000357482 SPATA31A7Q8IWB4 1347 aa18.58■□□□□ 0.56
USP6-202ENST00000357482 TMC1Q8TDI8 760 aa18.58■□□□□ 0.56
USP6-202ENST00000357482 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
USP6-202ENST00000357482 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
USP6-202ENST00000357482 KTN1Q86UP2 1357 aaKnown RBP18.57■□□□□ 0.56
USP6-202ENST00000357482 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
USP6-202ENST00000357482 OFD1O75665 1012 aa18.57■□□□□ 0.56
USP6-202ENST00000357482 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
USP6-202ENST00000357482 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
USP6-202ENST00000357482 CCDC125Q86Z20 511 aa18.57■□□□□ 0.56
USP6-202ENST00000357482 TTC21BQ7Z4L5 1316 aa18.55■□□□□ 0.56
USP6-202ENST00000357482 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
USP6-202ENST00000357482 CPDO75976 1380 aa18.55■□□□□ 0.56
USP6-202ENST00000357482 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms