RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 NPATQ14207 1427 aa15.05■□□□□ 0
SMARCAL1-201ENST00000357276 C14orf93Q9H972 538 aaKnown RBP15.05■□□□□ -0
SMARCAL1-201ENST00000357276 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
SMARCAL1-201ENST00000357276 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
SMARCAL1-201ENST00000357276 GCC1Q96CN9 775 aa15.04■□□□□ -0
SMARCAL1-201ENST00000357276 PRDM4Q9UKN5 801 aa15.04■□□□□ -0
SMARCAL1-201ENST00000357276 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
SMARCAL1-201ENST00000357276 CDC42BPGQ6DT37 1551 aa15.04■□□□□ -0
SMARCAL1-201ENST00000357276 MAP7D2Q96T17 732 aa15.04■□□□□ -0
SMARCAL1-201ENST00000357276 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
SMARCAL1-201ENST00000357276 DDX49Q9Y6V7 483 aaKnown RBP15.03■□□□□ -0
SMARCAL1-201ENST00000357276 MSNP26038 577 aaKnown RBP15.03■□□□□ -0
SMARCAL1-201ENST00000357276 PTCH1Q13635 1447 aa15.03■□□□□ -0
SMARCAL1-201ENST00000357276 LMBRD1Q9NUN5 540 aa15.02■□□□□ -0
SMARCAL1-201ENST00000357276 ZBTB7BO15156 539 aaPredicted RBP15.02□□□□□ -0.01
SMARCAL1-201ENST00000357276 ANP32BQ92688 251 aaKnown RBP15.02□□□□□ -0.01
SMARCAL1-201ENST00000357276 ZSCAN23Q3MJ62 389 aa15.01□□□□□ -0.01
SMARCAL1-201ENST00000357276 ZNF428Q96B54 188 aa15.01□□□□□ -0.01
SMARCAL1-201ENST00000357276 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
SMARCAL1-201ENST00000357276 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
SMARCAL1-201ENST00000357276 RBSNQ9H1K0 784 aa15□□□□□ -0.01
SMARCAL1-201ENST00000357276 MCM5P33992 734 aa14.99□□□□□ -0.01
SMARCAL1-201ENST00000357276 KNDC1Q76NI1 1749 aa14.99□□□□□ -0.01
SMARCAL1-201ENST00000357276 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
SMARCAL1-201ENST00000357276 NUCB2P80303 420 aa14.99□□□□□ -0.01
SMARCAL1-201ENST00000357276 ARHGAP45Q92619 1136 aa14.99□□□□□ -0.01
SMARCAL1-201ENST00000357276 RABEP1Q15276 862 aa14.98□□□□□ -0.01
SMARCAL1-201ENST00000357276 SIRT2Q8IXJ6 389 aa14.98□□□□□ -0.01
SMARCAL1-201ENST00000357276 CLTCQ00610 1675 aaKnown RBP14.98□□□□□ -0.01
SMARCAL1-201ENST00000357276 CDC45O75419 566 aa14.98□□□□□ -0.01
SMARCAL1-201ENST00000357276 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
SMARCAL1-201ENST00000357276 ZKSCAN5Q9Y2L8 839 aa14.97□□□□□ -0.01
SMARCAL1-201ENST00000357276 CHMP4BQ9H444 224 aaKnown RBP14.97□□□□□ -0.01
SMARCAL1-201ENST00000357276 GSPT1P15170 499 aaKnown RBP14.96□□□□□ -0.01
SMARCAL1-201ENST00000357276 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.01
SMARCAL1-201ENST00000357276 CAVIN1Q6NZI2 390 aaKnown RBP14.96□□□□□ -0.02
SMARCAL1-201ENST00000357276 SPATA31D1Q6ZQQ2 1576 aa14.96□□□□□ -0.02
SMARCAL1-201ENST00000357276 R3HCC1Q9Y3T6 440 aaKnown RBP14.96□□□□□ -0.02
SMARCAL1-201ENST00000357276 ABCC4O15439 1325 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 DYNC1I1O14576 645 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 PRIM1P49642 420 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 MCTP1Q6DN14 999 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 GGT6Q6P531 493 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 MTERF4Q7Z6M4 381 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 A0A1W2PP64 1363 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 GPT2Q8TD30 523 aa14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 CWC22Q9HCG8 908 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 CFAP65Q6ZU64 1925 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-201ENST00000357276 RPGRIP1LQ68CZ1 1315 aa14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 MRPL50Q8N5N7 158 aaKnown RBP14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 USP26Q9BXU7 913 aa14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 FAM135BQ49AJ0 1406 aa14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 CD163L1Q9NR16 1453 aa14.94□□□□□ -0.02
SMARCAL1-201ENST00000357276 PKP1Q13835 747 aa14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 ZDHHC9Q9Y397 364 aa14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 UQCRHLA0A096LP55 91 aa14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 UQCRHP07919 91 aa14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 TMEM131LA2VDJ0 1609 aa14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 PLEKHM2Q8IWE5 1019 aa14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 SMAP1Q8IYB5 467 aaPredicted RBP14.93□□□□□ -0.02
SMARCAL1-201ENST00000357276 KIF20BQ96Q89 1820 aa14.92□□□□□ -0.02
SMARCAL1-201ENST00000357276 LRSAM1Q6UWE0 723 aa14.92□□□□□ -0.02
SMARCAL1-201ENST00000357276 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
SMARCAL1-201ENST00000357276 KIF24Q5T7B8 1368 aa14.92□□□□□ -0.02
SMARCAL1-201ENST00000357276 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
SMARCAL1-201ENST00000357276 VAMP4O75379 141 aa14.92□□□□□ -0.02
SMARCAL1-201ENST00000357276 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
SMARCAL1-201ENST00000357276 FAM13BQ9NYF5 915 aa14.91□□□□□ -0.02
SMARCAL1-201ENST00000357276 NEXMIFQ5QGS0 1516 aa14.91□□□□□ -0.02
SMARCAL1-201ENST00000357276 ZFYVE9O95405 1425 aa14.91□□□□□ -0.02
SMARCAL1-201ENST00000357276 SLC52A1Q9NWF4 448 aa14.9□□□□□ -0.02
SMARCAL1-201ENST00000357276 TTC22Q5TAA0 569 aa14.9□□□□□ -0.02
SMARCAL1-201ENST00000357276 SASS6Q6UVJ0 657 aa14.9□□□□□ -0.02
SMARCAL1-201ENST00000357276 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
SMARCAL1-201ENST00000357276 TMEM63CQ9P1W3 806 aa14.9□□□□□ -0.02
SMARCAL1-201ENST00000357276 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
SMARCAL1-201ENST00000357276 MYO5BQ9ULV0 1848 aa14.89□□□□□ -0.03
SMARCAL1-201ENST00000357276 FCHSD2O94868 740 aa14.89□□□□□ -0.03
SMARCAL1-201ENST00000357276 DCTPP1Q9H773 170 aa14.89□□□□□ -0.03
SMARCAL1-201ENST00000357276 FYB1O15117 783 aa14.88□□□□□ -0.03
SMARCAL1-201ENST00000357276 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
SMARCAL1-201ENST00000357276 PRPF40AO75400 957 aaKnown RBP14.88□□□□□ -0.03
SMARCAL1-201ENST00000357276 ZNF853P0CG23 659 aa14.88□□□□□ -0.03
SMARCAL1-201ENST00000357276 DIAPH1O60610 1272 aaKnown RBP14.87□□□□□ -0.03
SMARCAL1-201ENST00000357276 CABP2Q9NPB3 220 aa14.87□□□□□ -0.03
SMARCAL1-201ENST00000357276 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
SMARCAL1-201ENST00000357276 ZGPATQ8N5A5 531 aaKnown RBP14.87□□□□□ -0.03
SMARCAL1-201ENST00000357276 GGNBP2Q9H3C7 697 aa14.86□□□□□ -0.03
SMARCAL1-201ENST00000357276 ATP10DQ9P241 1426 aa14.86□□□□□ -0.03
SMARCAL1-201ENST00000357276 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
SMARCAL1-201ENST00000357276 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
SMARCAL1-201ENST00000357276 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
SMARCAL1-201ENST00000357276 INTS3Q68E01 1043 aaKnown RBP14.86□□□□□ -0.03
SMARCAL1-201ENST00000357276 TSPYL6Q8N831 410 aa14.85□□□□□ -0.03
SMARCAL1-201ENST00000357276 PTPRMP28827 1452 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms