RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 IL16Q14005 1332 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 HNRNPMP52272 730 aaKnown RBP eCLIP10.6□□□□□ -0.71
GM2A-201ENST00000357164 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 PIBF1Q8WXW3 757 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 ARHGEF40Q8TER5 1519 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
GM2A-201ENST00000357164 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
GM2A-201ENST00000357164 TBC1D9Q6ZT07 1266 aa10.59□□□□□ -0.71
GM2A-201ENST00000357164 DZIP1LQ8IYY4 767 aaKnown RBP10.59□□□□□ -0.71
GM2A-201ENST00000357164 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
GM2A-201ENST00000357164 PNPLA6Q8IY17 1366 aa10.59□□□□□ -0.71
GM2A-201ENST00000357164 MSNP26038 577 aaKnown RBP10.59□□□□□ -0.71
GM2A-201ENST00000357164 ATP10DQ9P241 1426 aa10.59□□□□□ -0.71
GM2A-201ENST00000357164 GSPT1P15170 499 aaKnown RBP10.59□□□□□ -0.71
GM2A-201ENST00000357164 RGS12O14924 1447 aa10.58□□□□□ -0.72
GM2A-201ENST00000357164 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
GM2A-201ENST00000357164 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
GM2A-201ENST00000357164 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.58□□□□□ -0.728e-7■■■■□ 21
GM2A-201ENST00000357164 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
GM2A-201ENST00000357164 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
GM2A-201ENST00000357164 PRDM10Q9NQV6 1147 aa10.58□□□□□ -0.72
GM2A-201ENST00000357164 HECW2Q9P2P5 1572 aa10.57□□□□□ -0.72
GM2A-201ENST00000357164 A0A0U1RQG5 324 aaPredicted RBP10.57□□□□□ -0.72
GM2A-201ENST00000357164 ARHGAP5Q13017 1502 aa10.57□□□□□ -0.72
GM2A-201ENST00000357164 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
GM2A-201ENST00000357164 NSD2O96028 1365 aa10.57□□□□□ -0.72
GM2A-201ENST00000357164 ATF7IPQ6VMQ6 1270 aa10.57□□□□□ -0.72
GM2A-201ENST00000357164 ZBTB7BO15156 539 aaPredicted RBP10.57□□□□□ -0.72
GM2A-201ENST00000357164 DDX19BQ9UMR2 479 aa10.57□□□□□ -0.72
GM2A-201ENST00000357164 VGFO15240 615 aaPredicted RBP10.56□□□□□ -0.72
GM2A-201ENST00000357164 FUCA2Q9BTY2 467 aa10.56□□□□□ -0.72
GM2A-201ENST00000357164 XRN1Q8IZH2 1706 aaKnown RBP10.56□□□□□ -0.72
GM2A-201ENST00000357164 SSH1Q8WYL5 1049 aa10.56□□□□□ -0.72
GM2A-201ENST00000357164 ANKRD36BQ8N2N9 1353 aa10.56□□□□□ -0.72
GM2A-201ENST00000357164 TULP2O00295 520 aa10.56□□□□□ -0.72
GM2A-201ENST00000357164 RGL3Q3MIN7 710 aa10.56□□□□□ -0.72
GM2A-201ENST00000357164 RPAP1Q9BWH6 1393 aaPredicted RBP10.55□□□□□ -0.72
GM2A-201ENST00000357164 NRKQ7Z2Y5 1582 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 USP26Q9BXU7 913 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 NEXMIFQ5QGS0 1516 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 DNAJC5BQ9UF47 199 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 ABCC4O15439 1325 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 SYCP1Q15431 976 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 TMEM57Q8N5G2 664 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
GM2A-201ENST00000357164 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 KIDINS220Q9ULH0 1771 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 FAM135BQ49AJ0 1406 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 BCL2L12Q9HB09 334 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 RBM27Q9P2N5 1060 aaKnown RBP10.54□□□□□ -0.72
GM2A-201ENST00000357164 DDX49Q9Y6V7 483 aaKnown RBP10.54□□□□□ -0.72
GM2A-201ENST00000357164 CDK12Q9NYV4 1490 aaPredicted RBP10.54□□□□□ -0.72
GM2A-201ENST00000357164 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 MAP2P11137 1827 aaKnown RBP10.54□□□□□ -0.72
GM2A-201ENST00000357164 ABCC3O15438 1527 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
GM2A-201ENST00000357164 CAVIN1Q6NZI2 390 aaKnown RBP10.54□□□□□ -0.72
GM2A-201ENST00000357164 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
GM2A-201ENST00000357164 KCNF1Q9H3M0 494 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 AATKQ6ZMQ8 1374 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 TSPY4P0CV99 314 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 TSPY10P0CW01 314 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 CUL4AQ13619 759 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 CWC22Q9HCG8 908 aaKnown RBP10.53□□□□□ -0.72
GM2A-201ENST00000357164 NUCB2P80303 420 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 ALDH1L2Q3SY69 923 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 IPO4Q8TEX9 1081 aaKnown RBP10.53□□□□□ -0.72
GM2A-201ENST00000357164 BCL2L13Q9BXK5 485 aa10.53□□□□□ -0.72
GM2A-201ENST00000357164 ZBTB22O15209 634 aa10.52□□□□□ -0.72
GM2A-201ENST00000357164 AP5Z1O43299 807 aa10.52□□□□□ -0.72
GM2A-201ENST00000357164 BRD1O95696 1058 aa10.52□□□□□ -0.72
GM2A-201ENST00000357164 PDE4CQ08493 712 aa10.52□□□□□ -0.72
GM2A-201ENST00000357164 TSC1Q92574 1164 aa10.52□□□□□ -0.72
GM2A-201ENST00000357164 GCC1Q96CN9 775 aa10.51□□□□□ -0.73
GM2A-201ENST00000357164 RABEP1Q15276 862 aa10.51□□□□□ -0.73
GM2A-201ENST00000357164 NOB1Q9ULX3 412 aaKnown RBP10.51□□□□□ -0.73
GM2A-201ENST00000357164 ERBB3P21860 1342 aa10.51□□□□□ -0.73
GM2A-201ENST00000357164 NOLC1Q14978 699 aaKnown RBP eCLIP10.51□□□□□ -0.73
GM2A-201ENST00000357164 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
GM2A-201ENST00000357164 BBXQ8WY36 941 aaPredicted RBP10.51□□□□□ -0.73
GM2A-201ENST00000357164 ZNF830Q96NB3 372 aaPredicted RBP10.51□□□□□ -0.73
GM2A-201ENST00000357164 UVSSAQ2YD98 709 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 MCTP1Q6DN14 999 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 ZGPATQ8N5A5 531 aaKnown RBP10.5□□□□□ -0.73
GM2A-201ENST00000357164 CTNNA3Q9UI47 895 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 KIAA2012Q0VF49 1180 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 FAM208AQ9UK61 1670 aaKnown RBP10.5□□□□□ -0.73
GM2A-201ENST00000357164 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 TAF3Q5VWG9 929 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 CHAMP1Q96JM3 812 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 MORC2Q9Y6X9 1032 aaPredicted RBP10.5□□□□□ -0.73
GM2A-201ENST00000357164 SALL3Q9BXA9 1300 aa10.5□□□□□ -0.73
GM2A-201ENST00000357164 RRP7AQ9Y3A4 280 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms