RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SLIT3O75094 1523 aa15.07■□□□□ 0
CAPN3-204ENST00000356316 PIK3C2AO00443 1686 aa15.07■□□□□ 0
CAPN3-204ENST00000356316 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
CAPN3-204ENST00000356316 DDB1Q16531 1140 aa15.07■□□□□ 0
CAPN3-204ENST00000356316 HDGFL2Q7Z4V5 671 aaPredicted RBP15.07■□□□□ 0
CAPN3-204ENST00000356316 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
CAPN3-204ENST00000356316 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
CAPN3-204ENST00000356316 R3HDM1Q15032 1099 aaKnown RBP15.06■□□□□ 0
CAPN3-204ENST00000356316 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
CAPN3-204ENST00000356316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
CAPN3-204ENST00000356316 CAMKK2Q96RR4 588 aa15.06■□□□□ 0
CAPN3-204ENST00000356316 AXIN2Q9Y2T1 843 aa15.06■□□□□ 0
CAPN3-204ENST00000356316 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
CAPN3-204ENST00000356316 DISP2A7MBM2 1401 aa15.06■□□□□ 0
CAPN3-204ENST00000356316 CPSF1Q10570 1443 aaKnown RBP15.06■□□□□ 0
CAPN3-204ENST00000356316 SLC24A1O60721 1099 aa15.05■□□□□ -0
CAPN3-204ENST00000356316 NBPF14Q5TI25 921 aa15.05■□□□□ -0
CAPN3-204ENST00000356316 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
CAPN3-204ENST00000356316 TERF2IPQ9NYB0 399 aa15.05■□□□□ -0
CAPN3-204ENST00000356316 WDR17Q8IZU2 1322 aa15.05■□□□□ -0
CAPN3-204ENST00000356316 PARD3Q8TEW0 1356 aa15.05■□□□□ -0
CAPN3-204ENST00000356316 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
CAPN3-204ENST00000356316 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
CAPN3-204ENST00000356316 SLC12A5Q9H2X9 1139 aa15.02■□□□□ -0
CAPN3-204ENST00000356316 COL18A1P39060 1754 aa15.02□□□□□ -0.01
CAPN3-204ENST00000356316 RGPD5Q99666 1765 aa15.02□□□□□ -0.01
CAPN3-204ENST00000356316 EXOC5O00471 708 aa15.01□□□□□ -0.01
CAPN3-204ENST00000356316 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
CAPN3-204ENST00000356316 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
CAPN3-204ENST00000356316 OVOS2A0A0J9YW53 1432 aa15□□□□□ -0.01
CAPN3-204ENST00000356316 OVOS2Q6IE36 1432 aa15□□□□□ -0.01
CAPN3-204ENST00000356316 MON2Q7Z3U7 1717 aa15□□□□□ -0.01
CAPN3-204ENST00000356316 NME9Q86XW9 330 aa15□□□□□ -0.01
CAPN3-204ENST00000356316 LRP5O75197 1615 aa14.99□□□□□ -0.01
CAPN3-204ENST00000356316 USP31Q70CQ4 1352 aa14.98□□□□□ -0.01
CAPN3-204ENST00000356316 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
CAPN3-204ENST00000356316 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
CAPN3-204ENST00000356316 CCDC7Q96M83 1385 aa14.98□□□□□ -0.01
CAPN3-204ENST00000356316 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
CAPN3-204ENST00000356316 EDC4Q6P2E9 1401 aaKnown RBP14.97□□□□□ -0.01
CAPN3-204ENST00000356316 NFAT5O94916 1531 aa14.97□□□□□ -0.01
CAPN3-204ENST00000356316 LRRC37A3O60309 1634 aa14.96□□□□□ -0.01
CAPN3-204ENST00000356316 PLSCR1O15162 318 aa14.96□□□□□ -0.01
CAPN3-204ENST00000356316 MARCH10Q8NA82 808 aaPredicted RBP14.96□□□□□ -0.01
CAPN3-204ENST00000356316 SBF2Q86WG5 1849 aa14.96□□□□□ -0.01
CAPN3-204ENST00000356316 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
CAPN3-204ENST00000356316 WNK3Q9BYP7 1800 aa14.95□□□□□ -0.02
CAPN3-204ENST00000356316 ABCC6O95255 1503 aa14.95□□□□□ -0.02
CAPN3-204ENST00000356316 LTN1O94822 1766 aa14.95□□□□□ -0.02
CAPN3-204ENST00000356316 RREB1Q92766 1687 aa14.94□□□□□ -0.02
CAPN3-204ENST00000356316 ANKRD24Q8TF21 1146 aa14.94□□□□□ -0.02
CAPN3-204ENST00000356316 COG3Q96JB2 828 aa14.94□□□□□ -0.02
CAPN3-204ENST00000356316 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
CAPN3-204ENST00000356316 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
CAPN3-204ENST00000356316 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
CAPN3-204ENST00000356316 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
CAPN3-204ENST00000356316 IL2RBP14784 551 aa14.93□□□□□ -0.02
CAPN3-204ENST00000356316 TMF1P82094 1093 aa14.93□□□□□ -0.02
CAPN3-204ENST00000356316 TESK2Q96S53 571 aa14.93□□□□□ -0.02
CAPN3-204ENST00000356316 ERBB3P21860 1342 aa14.92□□□□□ -0.02
CAPN3-204ENST00000356316 USP54Q70EL1 1684 aa14.92□□□□□ -0.02
CAPN3-204ENST00000356316 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-204ENST00000356316 BCL9O00512 1426 aa14.91□□□□□ -0.02
CAPN3-204ENST00000356316 CDCA8Q53HL2 280 aa14.9□□□□□ -0.02
CAPN3-204ENST00000356316 PTF1AQ7RTS3 328 aa14.9□□□□□ -0.02
CAPN3-204ENST00000356316 IP6K1Q92551 441 aa14.9□□□□□ -0.02
CAPN3-204ENST00000356316 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-204ENST00000356316 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
CAPN3-204ENST00000356316 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
CAPN3-204ENST00000356316 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
CAPN3-204ENST00000356316 KCNQ2O43526 872 aa14.89□□□□□ -0.03
CAPN3-204ENST00000356316 AMPHP49418 695 aa14.89□□□□□ -0.03
CAPN3-204ENST00000356316 TNS2Q63HR2 1409 aa14.88□□□□□ -0.03
CAPN3-204ENST00000356316 USP47Q96K76 1375 aa14.87□□□□□ -0.03
CAPN3-204ENST00000356316 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
CAPN3-204ENST00000356316 ACSBG1Q96GR2 724 aa14.87□□□□□ -0.03
CAPN3-204ENST00000356316 PCGF6Q9BYE7 350 aa14.87□□□□□ -0.03
CAPN3-204ENST00000356316 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
CAPN3-204ENST00000356316 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
CAPN3-204ENST00000356316 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
CAPN3-204ENST00000356316 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
CAPN3-204ENST00000356316 PROM2Q8N271 834 aa14.86□□□□□ -0.03
CAPN3-204ENST00000356316 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
CAPN3-204ENST00000356316 DDX54Q8TDD1 881 aaKnown RBP14.85□□□□□ -0.03
CAPN3-204ENST00000356316 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
CAPN3-204ENST00000356316 HOXC9P31274 260 aa14.84□□□□□ -0.03
CAPN3-204ENST00000356316 MAP3K19Q56UN5 1328 aa14.84□□□□□ -0.03
CAPN3-204ENST00000356316 FAM208AQ9UK61 1670 aaKnown RBP14.84□□□□□ -0.03
CAPN3-204ENST00000356316 FYB1O15117 783 aa14.83□□□□□ -0.04
CAPN3-204ENST00000356316 FBLN1P23142 703 aa14.83□□□□□ -0.04
CAPN3-204ENST00000356316 GGNBP2Q9H3C7 697 aa14.83□□□□□ -0.04
CAPN3-204ENST00000356316 SLC15A2Q16348 729 aa14.82□□□□□ -0.04
CAPN3-204ENST00000356316 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-204ENST00000356316 NHSQ6T4R5 1651 aa14.81□□□□□ -0.04
CAPN3-204ENST00000356316 ZBTB7AO95365 584 aa14.8□□□□□ -0.04
CAPN3-204ENST00000356316 RRS1Q15050 365 aaKnown RBP14.8□□□□□ -0.04
CAPN3-204ENST00000356316 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
CAPN3-204ENST00000356316 SYTL4Q96C24 671 aaPredicted RBP14.8□□□□□ -0.04
CAPN3-204ENST00000356316 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
CAPN3-204ENST00000356316 SMG6Q86US8 1419 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 593 ms