RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 YTHDC2Q9H6S0 1430 aaKnown RBP10.57□□□□□ -0.72
COMMD9-202ENST00000355500 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
COMMD9-202ENST00000355500 MST1RQ04912 1400 aa10.57□□□□□ -0.72
COMMD9-202ENST00000355500 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
COMMD9-202ENST00000355500 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
COMMD9-202ENST00000355500 PTPRUQ92729 1446 aa10.56□□□□□ -0.72
COMMD9-202ENST00000355500 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
COMMD9-202ENST00000355500 ATP7BP35670 1465 aa10.56□□□□□ -0.72
COMMD9-202ENST00000355500 ZNF521Q96K83 1311 aa10.55□□□□□ -0.72
COMMD9-202ENST00000355500 CGNL1Q0VF96 1302 aa10.55□□□□□ -0.72
COMMD9-202ENST00000355500 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
COMMD9-202ENST00000355500 OS9Q13438 667 aaPredicted RBP10.55□□□□□ -0.72
COMMD9-202ENST00000355500 ABCC11Q96J66 1382 aa10.54□□□□□ -0.72
COMMD9-202ENST00000355500 ZNF772Q68DY9 489 aaPredicted RBP10.54□□□□□ -0.72
COMMD9-202ENST00000355500 RGS17Q9UGC6 210 aaPredicted RBP10.54□□□□□ -0.72
COMMD9-202ENST00000355500 NSD3Q9BZ95 1437 aa10.54□□□□□ -0.72
COMMD9-202ENST00000355500 MCCP23508 829 aa10.54□□□□□ -0.72
COMMD9-202ENST00000355500 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
COMMD9-202ENST00000355500 SETQ01105 290 aaPredicted RBP10.53□□□□□ -0.72
COMMD9-202ENST00000355500 FMN2Q9NZ56 1722 aa10.52□□□□□ -0.72
COMMD9-202ENST00000355500 MON2Q7Z3U7 1717 aa10.52□□□□□ -0.73
COMMD9-202ENST00000355500 LRP6O75581 1613 aa10.52□□□□□ -0.73
COMMD9-202ENST00000355500 FAM193AP78312 1265 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 GPATCH11Q8N954 259 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 AKAP12Q02952 1782 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 TOPAZ1Q8N9V7 1692 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 PATL2C9JE40 543 aaKnown RBP10.51□□□□□ -0.73
COMMD9-202ENST00000355500 WDR43Q15061 677 aaKnown RBP eCLIP10.51□□□□□ -0.73
COMMD9-202ENST00000355500 CARD14Q9BXL6 1004 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 CD163L1Q9NR16 1453 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 NWD2Q9ULI1 1742 aa10.51□□□□□ -0.73
COMMD9-202ENST00000355500 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
COMMD9-202ENST00000355500 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
COMMD9-202ENST00000355500 CANXP27824 592 aaKnown RBP10.49□□□□□ -0.73
COMMD9-202ENST00000355500 RRP1P56182 461 aaKnown RBP10.49□□□□□ -0.73
COMMD9-202ENST00000355500 TRMT2AQ8IZ69 625 aaKnown RBP10.49□□□□□ -0.73
COMMD9-202ENST00000355500 DNAJC2Q99543 621 aaKnown RBP10.49□□□□□ -0.73
COMMD9-202ENST00000355500 COL3A1P02461 1466 aaPredicted RBP10.49□□□□□ -0.73
COMMD9-202ENST00000355500 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
COMMD9-202ENST00000355500 ITSN1Q15811 1721 aa10.48□□□□□ -0.73
COMMD9-202ENST00000355500 MAFGO15525 162 aa10.48□□□□□ -0.73
COMMD9-202ENST00000355500 ATF3P18847 181 aa10.48□□□□□ -0.73
COMMD9-202ENST00000355500 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
COMMD9-202ENST00000355500 RCAN3Q9UKA8 241 aa10.48□□□□□ -0.73
COMMD9-202ENST00000355500 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
COMMD9-202ENST00000355500 ADAMTS8Q9UP79 889 aa10.47□□□□□ -0.73
COMMD9-202ENST00000355500 NRKQ7Z2Y5 1582 aa10.47□□□□□ -0.73
COMMD9-202ENST00000355500 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
COMMD9-202ENST00000355500 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.73
COMMD9-202ENST00000355500 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-202ENST00000355500 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
COMMD9-202ENST00000355500 AMOTL2Q9Y2J4 779 aa10.46□□□□□ -0.73
COMMD9-202ENST00000355500 PLEKHH1Q9ULM0 1364 aa10.46□□□□□ -0.73
COMMD9-202ENST00000355500 USP54Q70EL1 1684 aa10.46□□□□□ -0.74
COMMD9-202ENST00000355500 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
COMMD9-202ENST00000355500 BRINP3Q76B58 766 aa10.45□□□□□ -0.74
COMMD9-202ENST00000355500 PXDNQ92626 1479 aa10.45□□□□□ -0.74
COMMD9-202ENST00000355500 TERF2IPQ9NYB0 399 aa10.45□□□□□ -0.74
COMMD9-202ENST00000355500 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
COMMD9-202ENST00000355500 ABCA3Q99758 1704 aa10.44□□□□□ -0.74
COMMD9-202ENST00000355500 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
COMMD9-202ENST00000355500 CFAP53Q96M91 514 aa10.44□□□□□ -0.74
COMMD9-202ENST00000355500 METP08581 1390 aa10.44□□□□□ -0.74
COMMD9-202ENST00000355500 ANKARQ7Z5J8 1434 aa10.44□□□□□ -0.74
COMMD9-202ENST00000355500 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
COMMD9-202ENST00000355500 SENP3-EIF4A1A0A087X0R7 540 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 E9PSI1 815 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 NEFMP07197 916 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 TMEM132EQ6IEE7 984 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 MORC1Q86VD1 984 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 ATRNO75882 1429 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 EDC4Q6P2E9 1401 aaKnown RBP10.43□□□□□ -0.74
COMMD9-202ENST00000355500 FANCIQ9NVI1 1328 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 SLFN5Q08AF3 891 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
COMMD9-202ENST00000355500 POTEAQ6S8J7 498 aa10.42□□□□□ -0.74
COMMD9-202ENST00000355500 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
COMMD9-202ENST00000355500 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 WDR63Q8IWG1 891 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 RUNDC1Q96C34 613 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 SLC12A5Q9H2X9 1139 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
COMMD9-202ENST00000355500 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
COMMD9-202ENST00000355500 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.74
COMMD9-202ENST00000355500 NUTM2DQ5VT03 806 aaPredicted RBP10.4□□□□□ -0.74
COMMD9-202ENST00000355500 HDGFL2Q7Z4V5 671 aaPredicted RBP10.4□□□□□ -0.74
COMMD9-202ENST00000355500 APBB1O00213 710 aa10.4□□□□□ -0.75
COMMD9-202ENST00000355500 PRAM1Q96QH2 718 aa10.4□□□□□ -0.75
COMMD9-202ENST00000355500 TRPM3Q9HCF6 1732 aaPredicted RBP10.4□□□□□ -0.75
COMMD9-202ENST00000355500 TMTC2Q8N394 836 aa10.39□□□□□ -0.75
COMMD9-202ENST00000355500 FNBP4Q8N3X1 1017 aaPredicted RBP10.39□□□□□ -0.75
COMMD9-202ENST00000355500 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
COMMD9-202ENST00000355500 SBNO1A3KN83 1393 aa10.39□□□□□ -0.75
COMMD9-202ENST00000355500 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
COMMD9-202ENST00000355500 SGSM3Q96HU1 749 aa10.39□□□□□ -0.75
COMMD9-202ENST00000355500 POGKQ9P215 609 aa10.38□□□□□ -0.75
COMMD9-202ENST00000355500 ALS2Q96Q42 1657 aa10.38□□□□□ -0.75
COMMD9-202ENST00000355500 LRP5O75197 1615 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms