RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 HOXC9P31274 260 aa12.72□□□□□ -0.37
NPHP1-202ENST00000355301 PNNQ9H307 717 aaKnown RBP12.72□□□□□ -0.37
NPHP1-202ENST00000355301 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
NPHP1-202ENST00000355301 PDE3BQ13370 1112 aa12.7□□□□□ -0.38
NPHP1-202ENST00000355301 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
NPHP1-202ENST00000355301 IP6K1Q92551 441 aa12.7□□□□□ -0.38
NPHP1-202ENST00000355301 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
NPHP1-202ENST00000355301 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
NPHP1-202ENST00000355301 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
NPHP1-202ENST00000355301 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
NPHP1-202ENST00000355301 ZNF521Q96K83 1311 aa12.7□□□□□ -0.38
NPHP1-202ENST00000355301 TOM1O60784 492 aa12.68□□□□□ -0.38
NPHP1-202ENST00000355301 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
NPHP1-202ENST00000355301 HMOX1P09601 288 aa12.67□□□□□ -0.38
NPHP1-202ENST00000355301 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
NPHP1-202ENST00000355301 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
NPHP1-202ENST00000355301 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
NPHP1-202ENST00000355301 KDRP35968 1356 aa12.67□□□□□ -0.38
NPHP1-202ENST00000355301 ABCC6O95255 1503 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 CPDO75976 1380 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 CABLES1Q8TDN4 633 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 ABCA3Q99758 1704 aa12.66□□□□□ -0.38
NPHP1-202ENST00000355301 NEFMP07197 916 aa12.65□□□□□ -0.38
NPHP1-202ENST00000355301 ZC3H6P61129 1189 aaKnown RBP12.65□□□□□ -0.38
NPHP1-202ENST00000355301 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
NPHP1-202ENST00000355301 LRRC59Q96AG4 307 aaKnown RBP12.65□□□□□ -0.38
NPHP1-202ENST00000355301 EYA1Q99502 592 aa12.65□□□□□ -0.38
NPHP1-202ENST00000355301 COL18A1P39060 1754 aa12.65□□□□□ -0.39
NPHP1-202ENST00000355301 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
NPHP1-202ENST00000355301 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
NPHP1-202ENST00000355301 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
NPHP1-202ENST00000355301 ZBTB7CA1YPR0 619 aa12.64□□□□□ -0.39
NPHP1-202ENST00000355301 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
NPHP1-202ENST00000355301 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
NPHP1-202ENST00000355301 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
NPHP1-202ENST00000355301 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
NPHP1-202ENST00000355301 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
NPHP1-202ENST00000355301 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
NPHP1-202ENST00000355301 COL22A1Q8NFW1 1626 aaPredicted RBP12.63□□□□□ -0.39
NPHP1-202ENST00000355301 KIAA0232Q92628 1395 aa12.63□□□□□ -0.39
NPHP1-202ENST00000355301 PHLPP1O60346 1717 aa12.63□□□□□ -0.39
NPHP1-202ENST00000355301 LTV1Q96GA3 475 aaPredicted RBP12.62□□□□□ -0.39
NPHP1-202ENST00000355301 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
NPHP1-202ENST00000355301 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
NPHP1-202ENST00000355301 NFE2L2Q16236 605 aa12.62□□□□□ -0.39
NPHP1-202ENST00000355301 WDR63Q8IWG1 891 aa12.62□□□□□ -0.39
NPHP1-202ENST00000355301 ERBB3P21860 1342 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 RIPK4P57078 832 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
NPHP1-202ENST00000355301 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
NPHP1-202ENST00000355301 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
NPHP1-202ENST00000355301 NBPF6Q5VWK0 638 aa12.6□□□□□ -0.39
NPHP1-202ENST00000355301 TRMT2AQ8IZ69 625 aaKnown RBP12.6□□□□□ -0.39
NPHP1-202ENST00000355301 NBPF4Q96M43 638 aa12.6□□□□□ -0.39
NPHP1-202ENST00000355301 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
NPHP1-202ENST00000355301 E9PSI1 815 aa12.6□□□□□ -0.39
NPHP1-202ENST00000355301 LMO7Q8WWI1 1683 aa12.59□□□□□ -0.39
NPHP1-202ENST00000355301 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
NPHP1-202ENST00000355301 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
NPHP1-202ENST00000355301 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
NPHP1-202ENST00000355301 DLG5Q8TDM6 1919 aa12.59□□□□□ -0.39
NPHP1-202ENST00000355301 FAM208AQ9UK61 1670 aaKnown RBP12.59□□□□□ -0.39
NPHP1-202ENST00000355301 CHRNA2Q15822 529 aa12.58□□□□□ -0.39
NPHP1-202ENST00000355301 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.39
NPHP1-202ENST00000355301 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
NPHP1-202ENST00000355301 IL16Q14005 1332 aa12.57□□□□□ -0.4
NPHP1-202ENST00000355301 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
NPHP1-202ENST00000355301 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
NPHP1-202ENST00000355301 GAS2L2Q8NHY3 880 aa12.55□□□□□ -0.4
NPHP1-202ENST00000355301 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
NPHP1-202ENST00000355301 COL5A2P05997 1499 aaPredicted RBP12.55□□□□□ -0.4
NPHP1-202ENST00000355301 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
NPHP1-202ENST00000355301 CALD1Q05682 793 aaKnown RBP12.54□□□□□ -0.4
NPHP1-202ENST00000355301 MYH16Q9H6N6 1097 aa12.54□□□□□ -0.4
NPHP1-202ENST00000355301 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
NPHP1-202ENST00000355301 WDR17Q8IZU2 1322 aa12.54□□□□□ -0.4
NPHP1-202ENST00000355301 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
NPHP1-202ENST00000355301 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
NPHP1-202ENST00000355301 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
NPHP1-202ENST00000355301 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.4
NPHP1-202ENST00000355301 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.4
NPHP1-202ENST00000355301 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
NPHP1-202ENST00000355301 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
NPHP1-202ENST00000355301 RNF123Q5XPI4 1314 aa12.52□□□□□ -0.41
NPHP1-202ENST00000355301 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
NPHP1-202ENST00000355301 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 GNAT3A8MTJ3 354 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
NPHP1-202ENST00000355301 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
NPHP1-202ENST00000355301 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms