RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
DNMT3B-204ENST00000353855 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
DNMT3B-204ENST00000353855 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 GPS2Q13227 327 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 CCDC183Q5T5S1 534 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 C16orf71Q8IYS4 520 aaPredicted RBP17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 TNMDQ9H2S6 317 aa17.04■□□□□ 0.32
DNMT3B-204ENST00000353855 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
DNMT3B-204ENST00000353855 BLMP54132 1417 aaPredicted RBP17.03■□□□□ 0.32
DNMT3B-204ENST00000353855 TNNT1P13805 278 aa17.03■□□□□ 0.32
DNMT3B-204ENST00000353855 GIMAP6Q6P9H5 292 aa17.03■□□□□ 0.32
DNMT3B-204ENST00000353855 GOLGA6L1Q8N7Z2 621 aa17.03■□□□□ 0.32
DNMT3B-204ENST00000353855 ARGLU1Q9NWB6 273 aaPredicted RBP17.03■□□□□ 0.32
DNMT3B-204ENST00000353855 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
DNMT3B-204ENST00000353855 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.32
DNMT3B-204ENST00000353855 PPP1R9BQ96SB3 815 aa17.02■□□□□ 0.32
DNMT3B-204ENST00000353855 TMX3Q96JJ7 454 aa17.02■□□□□ 0.31
DNMT3B-204ENST00000353855 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 CKAP2LQ8IYA6 745 aa17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
DNMT3B-204ENST00000353855 PRAG1Q86YV5 1406 aa17■□□□□ 0.31
DNMT3B-204ENST00000353855 TAF3Q5VWG9 929 aa17■□□□□ 0.31
DNMT3B-204ENST00000353855 COG3Q96JB2 828 aa17■□□□□ 0.31
DNMT3B-204ENST00000353855 PZPP20742 1482 aa17■□□□□ 0.31
DNMT3B-204ENST00000353855 DCTN1Q14203 1278 aa17■□□□□ 0.31
DNMT3B-204ENST00000353855 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
DNMT3B-204ENST00000353855 PKP1Q13835 747 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 TRMT1Q9NXH9 659 aaKnown RBP16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 WDR62O43379 1518 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 U2AF2P26368 475 aaKnown RBP eCLIP16.99■□□□□ 0.312e-7■■□□□ 14.1
DNMT3B-204ENST00000353855 ZNF445P59923 1031 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 SKIDA1Q1XH10 827 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 V9GYY5 206 aaPredicted RBP16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 SDF4Q9BRK5 362 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
DNMT3B-204ENST00000353855 SDSP20132 328 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 VGLL3A8MV65 326 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 STK3Q13188 491 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 LARP1BQ659C4 914 aaKnown RBP16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 GTPBP4Q9BZE4 634 aaKnown RBP16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 TERF1P54274 439 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 USP48Q86UV5 1035 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 TMEM63CQ9P1W3 806 aa16.98■□□□□ 0.31
DNMT3B-204ENST00000353855 KRT85P78386 507 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 SMC2O95347 1197 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 MAP3K11Q16584 847 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 LRRCC1Q9C099 1032 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 KDM6BO15054 1643 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 KIF14Q15058 1648 aa16.97■□□□□ 0.31
DNMT3B-204ENST00000353855 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.31
DNMT3B-204ENST00000353855 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
DNMT3B-204ENST00000353855 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
DNMT3B-204ENST00000353855 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.31
DNMT3B-204ENST00000353855 MYRIPQ8NFW9 859 aa16.96■□□□□ 0.31
DNMT3B-204ENST00000353855 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
DNMT3B-204ENST00000353855 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
DNMT3B-204ENST00000353855 POLR3GO15318 223 aaPredicted RBP16.95■□□□□ 0.3
DNMT3B-204ENST00000353855 PTPN14Q15678 1187 aa16.95■□□□□ 0.3
DNMT3B-204ENST00000353855 GNAI2P04899 355 aa16.95■□□□□ 0.3
DNMT3B-204ENST00000353855 SAMD9Q5K651 1589 aa16.95■□□□□ 0.3
DNMT3B-204ENST00000353855 ZNF500O60304 480 aaPredicted RBP16.94■□□□□ 0.3
DNMT3B-204ENST00000353855 CWC27Q6UX04 472 aaKnown RBP16.94■□□□□ 0.3
DNMT3B-204ENST00000353855 UBTFL1P0CB47 393 aaPredicted RBP16.94■□□□□ 0.3
DNMT3B-204ENST00000353855 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.31e-7■■■■■ 30.9
DNMT3B-204ENST00000353855 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
DNMT3B-204ENST00000353855 ASXL1Q8IXJ9 1541 aa16.94■□□□□ 0.3
DNMT3B-204ENST00000353855 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
DNMT3B-204ENST00000353855 SPATA32Q96LK8 384 aa16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 DTNBO60941 627 aa16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 FBLN1P23142 703 aa16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 AMPHP49418 695 aa16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
DNMT3B-204ENST00000353855 ZNF521Q96K83 1311 aa16.92■□□□□ 0.3
DNMT3B-204ENST00000353855 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
DNMT3B-204ENST00000353855 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
DNMT3B-204ENST00000353855 UVSSAQ2YD98 709 aa16.92■□□□□ 0.3
DNMT3B-204ENST00000353855 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms