RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
IFT88-202ENST00000351808 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
IFT88-202ENST00000351808 KDM4AO75164 1064 aa16.03■□□□□ 0.16
IFT88-202ENST00000351808 CHMP4CQ96CF2 233 aa16.03■□□□□ 0.16
IFT88-202ENST00000351808 POLR3AO14802 1390 aaPredicted RBP16.03■□□□□ 0.16
IFT88-202ENST00000351808 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
IFT88-202ENST00000351808 FEZ2Q9UHY8 353 aaPredicted RBP16.03■□□□□ 0.16
IFT88-202ENST00000351808 ADCY10Q96PN6 1610 aa16.03■□□□□ 0.16
IFT88-202ENST00000351808 SYCP1Q15431 976 aa16.02■□□□□ 0.16
IFT88-202ENST00000351808 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
IFT88-202ENST00000351808 KANK1Q14678 1352 aa16.02■□□□□ 0.16
IFT88-202ENST00000351808 CROCC2H7BZ55 1655 aa16.02■□□□□ 0.16
IFT88-202ENST00000351808 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
IFT88-202ENST00000351808 C1orf115Q9H7X2 142 aa16.02■□□□□ 0.15
IFT88-202ENST00000351808 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
IFT88-202ENST00000351808 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
IFT88-202ENST00000351808 AP5Z1O43299 807 aa16.01■□□□□ 0.15
IFT88-202ENST00000351808 GSPT1P15170 499 aaKnown RBP16.01■□□□□ 0.15
IFT88-202ENST00000351808 C16orf45Q96MC5 204 aaPredicted RBP16.01■□□□□ 0.15
IFT88-202ENST00000351808 CCDC27Q2M243 656 aa16.01■□□□□ 0.15
IFT88-202ENST00000351808 PLA2R1Q13018 1463 aa16■□□□□ 0.15
IFT88-202ENST00000351808 CCDC141Q6ZP82 1450 aa16■□□□□ 0.15
IFT88-202ENST00000351808 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
IFT88-202ENST00000351808 HNRNPH2P55795 449 aaKnown RBP16■□□□□ 0.15
IFT88-202ENST00000351808 TSPYL1Q9H0U9 437 aa16■□□□□ 0.15
IFT88-202ENST00000351808 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
IFT88-202ENST00000351808 SMTNL1A8MU46 457 aa16■□□□□ 0.15
IFT88-202ENST00000351808 BRD1O95696 1058 aa16■□□□□ 0.15
IFT88-202ENST00000351808 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
IFT88-202ENST00000351808 GCC1Q96CN9 775 aa15.99■□□□□ 0.15
IFT88-202ENST00000351808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
IFT88-202ENST00000351808 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
IFT88-202ENST00000351808 USP48Q86UV5 1035 aa15.98■□□□□ 0.15
IFT88-202ENST00000351808 CT47B1P0C2W7 299 aaPredicted RBP15.98■□□□□ 0.15
IFT88-202ENST00000351808 EIF2AK4Q9P2K8 1649 aaKnown RBP15.98■□□□□ 0.15
IFT88-202ENST00000351808 NUP160Q12769 1436 aa15.98■□□□□ 0.15
IFT88-202ENST00000351808 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
IFT88-202ENST00000351808 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
IFT88-202ENST00000351808 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
IFT88-202ENST00000351808 TNNT1P13805 278 aa15.97■□□□□ 0.15
IFT88-202ENST00000351808 CCDC112Q8NEF3 446 aa15.97■□□□□ 0.15
IFT88-202ENST00000351808 PTGS1P23219 599 aa15.96■□□□□ 0.15
IFT88-202ENST00000351808 RAD51AP2Q09MP3 1159 aa15.96■□□□□ 0.15
IFT88-202ENST00000351808 CCDC183Q5T5S1 534 aa15.96■□□□□ 0.15
IFT88-202ENST00000351808 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.14
IFT88-202ENST00000351808 TPM3P06753 285 aa15.96■□□□□ 0.14
IFT88-202ENST00000351808 TMX3Q96JJ7 454 aa15.96■□□□□ 0.14
IFT88-202ENST00000351808 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.96■□□□□ 0.14
IFT88-202ENST00000351808 V9GYY5 206 aaPredicted RBP15.96■□□□□ 0.14
IFT88-202ENST00000351808 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.14
IFT88-202ENST00000351808 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
IFT88-202ENST00000351808 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
IFT88-202ENST00000351808 RBM6P78332 1123 aaKnown RBP15.95■□□□□ 0.14
IFT88-202ENST00000351808 ZNF397Q8NF99 534 aaPredicted RBP15.95■□□□□ 0.14
IFT88-202ENST00000351808 IFT57Q9NWB7 429 aa15.95■□□□□ 0.14
IFT88-202ENST00000351808 MYOM1P52179 1685 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 FAM53CQ9NYF3 392 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 GOLGA6L6A8MZA4 724 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 CYP2C19P33261 490 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 PLEKHM2Q8IWE5 1019 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 RSPH14Q9UHP6 348 aa15.94■□□□□ 0.14
IFT88-202ENST00000351808 LRMPQ12912 555 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
IFT88-202ENST00000351808 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 MX1P20591 662 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 NEK4P51957 841 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
IFT88-202ENST00000351808 ZNF592Q92610 1267 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
IFT88-202ENST00000351808 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 MLECQ14165 292 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 INTS3Q68E01 1043 aaKnown RBP15.93■□□□□ 0.14
IFT88-202ENST00000351808 TMX1Q9H3N1 280 aa15.93■□□□□ 0.14
IFT88-202ENST00000351808 SOX12O15370 315 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 NOS1P29475 1434 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 PDS5BQ9NTI5 1447 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 ZBTB7BO15156 539 aaPredicted RBP15.92■□□□□ 0.14
IFT88-202ENST00000351808 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
IFT88-202ENST00000351808 MTHFSP49914 203 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
IFT88-202ENST00000351808 FBXO38Q6PIJ6 1188 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
IFT88-202ENST00000351808 EFCC1Q9HA90 598 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 PAXBP1Q9Y5B6 917 aa15.92■□□□□ 0.14
IFT88-202ENST00000351808 PBRM1Q86U86 1689 aa15.91■□□□□ 0.14
IFT88-202ENST00000351808 SRPK2P78362 688 aaKnown RBP15.91■□□□□ 0.14
IFT88-202ENST00000351808 C16orf71Q8IYS4 520 aaPredicted RBP15.91■□□□□ 0.14
IFT88-202ENST00000351808 TTC22Q5TAA0 569 aa15.91■□□□□ 0.14
IFT88-202ENST00000351808 CCDC186Q7Z3E2 898 aa15.9■□□□□ 0.14
IFT88-202ENST00000351808 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
IFT88-202ENST00000351808 TCHHQ07283 1943 aa15.9■□□□□ 0.14
IFT88-202ENST00000351808 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
IFT88-202ENST00000351808 BRD2P25440 801 aaKnown RBP15.89■□□□□ 0.13
IFT88-202ENST00000351808 FAM193AP78312 1265 aa15.89■□□□□ 0.13
IFT88-202ENST00000351808 YY1AP1Q9H869 796 aa15.89■□□□□ 0.13
IFT88-202ENST00000351808 DHX37Q8IY37 1157 aaKnown RBP15.89■□□□□ 0.13
IFT88-202ENST00000351808 SPAG9O60271 1321 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms