RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 PROM2Q8N271 834 aa26.72■■□□□ 1.87
KDM5C-201ENST00000349663 EVC2Q86UK5 1308 aa26.7■■□□□ 1.87
KDM5C-201ENST00000349663 ARHGEF25Q86VW2 580 aa26.7■■□□□ 1.86
KDM5C-201ENST00000349663 KCNH5Q8NCM2 988 aa26.7■■□□□ 1.86
KDM5C-201ENST00000349663 ZNF692Q9BU19 519 aaPredicted RBP26.7■■□□□ 1.86
KDM5C-201ENST00000349663 LRRC37A3O60309 1634 aa26.69■■□□□ 1.86
KDM5C-201ENST00000349663 RGPD3A6NKT7 1758 aaPredicted RBP26.69■■□□□ 1.86
KDM5C-201ENST00000349663 RGPD4Q7Z3J3 1758 aa26.69■■□□□ 1.86
KDM5C-201ENST00000349663 BCL9O00512 1426 aa26.68■■□□□ 1.86
KDM5C-201ENST00000349663 SBF2Q86WG5 1849 aa26.68■■□□□ 1.86
KDM5C-201ENST00000349663 CARD10Q9BWT7 1032 aa26.68■■□□□ 1.86
KDM5C-201ENST00000349663 PDGFDQ9GZP0 370 aaPredicted RBP26.68■■□□□ 1.86
KDM5C-201ENST00000349663 CSB-PGBD3P0DP91 1061 aa26.67■■□□□ 1.86
KDM5C-201ENST00000349663 QRICH2Q9H0J4 1663 aa26.66■■□□□ 1.86
KDM5C-201ENST00000349663 TTC21BQ7Z4L5 1316 aa26.66■■□□□ 1.86
KDM5C-201ENST00000349663 COL18A1P39060 1754 aa26.66■■□□□ 1.86
KDM5C-201ENST00000349663 CPSF1Q10570 1443 aaKnown RBP26.66■■□□□ 1.86
KDM5C-201ENST00000349663 EXOC5O00471 708 aa26.66■■□□□ 1.86
KDM5C-201ENST00000349663 ZBTB7AO95365 584 aa26.66■■□□□ 1.86
KDM5C-201ENST00000349663 SOX12O15370 315 aa26.65■■□□□ 1.86
KDM5C-201ENST00000349663 UTRNP46939 3433 aa26.65■■□□□ 1.86
KDM5C-201ENST00000349663 PIK3C2AO00443 1686 aa26.64■■□□□ 1.86
KDM5C-201ENST00000349663 TXNRD1Q16881 649 aa26.64■■□□□ 1.86
KDM5C-201ENST00000349663 STK32BQ9NY57 414 aa26.63■■□□□ 1.85
KDM5C-201ENST00000349663 PTGER2P43116 358 aa26.62■■□□□ 1.85
KDM5C-201ENST00000349663 L3MBTL2Q969R5 705 aa26.62■■□□□ 1.85
KDM5C-201ENST00000349663 ATF5Q9Y2D1 282 aaPredicted RBP26.62■■□□□ 1.85
KDM5C-201ENST00000349663 TTC21AQ8NDW8 1320 aa26.62■■□□□ 1.85
KDM5C-201ENST00000349663 CASZ1Q86V15 1759 aa26.61■■□□□ 1.85
KDM5C-201ENST00000349663 SLC15A2Q16348 729 aa26.6■■□□□ 1.85
KDM5C-201ENST00000349663 CCDC7Q96M83 1385 aa26.58■■□□□ 1.84
KDM5C-201ENST00000349663 WNK3Q9BYP7 1800 aa26.55■■□□□ 1.84
KDM5C-201ENST00000349663 AKAP12Q02952 1782 aa26.55■■□□□ 1.84
KDM5C-201ENST00000349663 TRPM1Q7Z4N2 1603 aa26.54■■□□□ 1.84
KDM5C-201ENST00000349663 MTFR1LQ9H019 292 aa26.54■■□□□ 1.84
KDM5C-201ENST00000349663 KTN1Q86UP2 1357 aaKnown RBP26.54■■□□□ 1.84
KDM5C-201ENST00000349663 SYT17Q9BSW7 474 aa26.53■■□□□ 1.84
KDM5C-201ENST00000349663 FHDC1Q9C0D6 1143 aaPredicted RBP26.53■■□□□ 1.84
KDM5C-201ENST00000349663 RGPD5Q99666 1765 aa26.53■■□□□ 1.84
KDM5C-201ENST00000349663 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
KDM5C-201ENST00000349663 NFAT5O94916 1531 aa26.51■■□□□ 1.83
KDM5C-201ENST00000349663 TNS2Q63HR2 1409 aa26.5■■□□□ 1.83
KDM5C-201ENST00000349663 ACSBG1Q96GR2 724 aa26.5■■□□□ 1.83
KDM5C-201ENST00000349663 MYOM1P52179 1685 aa26.5■■□□□ 1.83
KDM5C-201ENST00000349663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.49■■□□□ 1.83
KDM5C-201ENST00000349663 SGIP1Q9BQI5 828 aa26.49■■□□□ 1.83
KDM5C-201ENST00000349663 NLRP2Q9NX02 1062 aa26.49■■□□□ 1.83
KDM5C-201ENST00000349663 ZNF784Q8NCA9 323 aaPredicted RBP26.48■■□□□ 1.83
KDM5C-201ENST00000349663 SIN3AQ96ST3 1273 aa26.48■■□□□ 1.83
KDM5C-201ENST00000349663 ABCC6O95255 1503 aa26.47■■□□□ 1.83
KDM5C-201ENST00000349663 ERBB3P21860 1342 aa26.46■■□□□ 1.83
KDM5C-201ENST00000349663 IL2RBP14784 551 aa26.46■■□□□ 1.83
KDM5C-201ENST00000349663 USP31Q70CQ4 1352 aa26.46■■□□□ 1.83
KDM5C-201ENST00000349663 ARXQ96QS3 562 aa26.44■■□□□ 1.82
KDM5C-201ENST00000349663 NEUROD1Q13562 356 aa26.43■■□□□ 1.82
KDM5C-201ENST00000349663 NME9Q86XW9 330 aa26.43■■□□□ 1.82
KDM5C-201ENST00000349663 ANKRD24Q8TF21 1146 aa26.41■■□□□ 1.82
KDM5C-201ENST00000349663 NHSQ6T4R5 1651 aa26.41■■□□□ 1.82
KDM5C-201ENST00000349663 TMC1Q8TDI8 760 aa26.39■■□□□ 1.82
KDM5C-201ENST00000349663 SBNO2Q9Y2G9 1366 aa26.38■■□□□ 1.81
KDM5C-201ENST00000349663 ZNF827Q17R98 1081 aa26.38■■□□□ 1.81
KDM5C-201ENST00000349663 HDGFL2Q7Z4V5 671 aaPredicted RBP26.38■■□□□ 1.81
KDM5C-201ENST00000349663 LRRC4BQ9NT99 713 aa26.38■■□□□ 1.81
KDM5C-201ENST00000349663 MAP3K5Q99683 1374 aa26.36■■□□□ 1.81
KDM5C-201ENST00000349663 MON2Q7Z3U7 1717 aa26.36■■□□□ 1.81
KDM5C-201ENST00000349663 GOLGB1Q14789 3259 aaKnown RBP26.35■■□□□ 1.81
KDM5C-201ENST00000349663 SLC12A5Q9H2X9 1139 aa26.35■■□□□ 1.81
KDM5C-201ENST00000349663 CD163L1Q9NR16 1453 aa26.34■■□□□ 1.81
KDM5C-201ENST00000349663 PAPPAQ13219 1627 aa26.33■■□□□ 1.81
KDM5C-201ENST00000349663 DDX54Q8TDD1 881 aaKnown RBP26.33■■□□□ 1.81
KDM5C-201ENST00000349663 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 GPR162Q16538 588 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 SLC27A3Q5K4L6 730 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 SLC16A10Q8TF71 515 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 AKT1S1Q96B36 256 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 CARD11Q9BXL7 1154 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 TERF2IPQ9NYB0 399 aa26.32■■□□□ 1.8
KDM5C-201ENST00000349663 BTAF1O14981 1849 aa26.31■■□□□ 1.8
KDM5C-201ENST00000349663 IP6K1Q92551 441 aa26.31■■□□□ 1.8
KDM5C-201ENST00000349663 USP54Q70EL1 1684 aa26.31■■□□□ 1.8
KDM5C-201ENST00000349663 EDC4Q6P2E9 1401 aaKnown RBP26.31■■□□□ 1.8
KDM5C-201ENST00000349663 LTN1O94822 1766 aa26.29■■□□□ 1.8
KDM5C-201ENST00000349663 POLD1P28340 1107 aa26.29■■□□□ 1.8
KDM5C-201ENST00000349663 CHD4Q14839 1912 aa26.29■■□□□ 1.8
KDM5C-201ENST00000349663 C1QTNF8P60827 252 aa26.28■■□□□ 1.8
KDM5C-201ENST00000349663 LTV1Q96GA3 475 aaPredicted RBP26.28■■□□□ 1.8
KDM5C-201ENST00000349663 SENP3-EIF4A1A0A087X0R7 540 aa26.26■■□□□ 1.79
KDM5C-201ENST00000349663 KLHL34Q8N239 644 aa26.26■■□□□ 1.79
KDM5C-201ENST00000349663 TFCP2L1Q9NZI6 479 aa26.26■■□□□ 1.79
KDM5C-201ENST00000349663 SYTL4Q96C24 671 aaPredicted RBP26.25■■□□□ 1.79
KDM5C-201ENST00000349663 PUS7Q96PZ0 661 aaKnown RBP26.25■■□□□ 1.79
KDM5C-201ENST00000349663 A0A1W2PP64 1363 aa26.24■■□□□ 1.79
KDM5C-201ENST00000349663 PNPLA7Q6ZV29 1317 aa26.24■■□□□ 1.79
KDM5C-201ENST00000349663 PRIM1P49642 420 aaKnown RBP26.24■■□□□ 1.79
KDM5C-201ENST00000349663 KCNQ4P56696 695 aa26.22■■□□□ 1.79
KDM5C-201ENST00000349663 PELP1Q8IZL8 1130 aaKnown RBP26.21■■□□□ 1.79
KDM5C-201ENST00000349663 ANKRD36BQ8N2N9 1353 aa26.2■■□□□ 1.78
KDM5C-201ENST00000349663 ZCRB1Q8TBF4 217 aaKnown RBP26.19■■□□□ 1.78
KDM5C-201ENST00000349663 COG3Q96JB2 828 aa26.19■■□□□ 1.78
KDM5C-201ENST00000349663 HOXC9P31274 260 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms