RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ADGRB2O60241 1585 aa18.66■□□□□ 0.58
PTBP1-201ENST00000349038 SASS6Q6UVJ0 657 aa18.66■□□□□ 0.58
PTBP1-201ENST00000349038 TSPOAP1O95153 1857 aa18.66■□□□□ 0.58
PTBP1-201ENST00000349038 SAFB2Q14151 953 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTBP1-201ENST00000349038 SLC12A5Q9H2X9 1139 aa18.65■□□□□ 0.58
PTBP1-201ENST00000349038 KIF3BO15066 747 aa18.65■□□□□ 0.58
PTBP1-201ENST00000349038 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
PTBP1-201ENST00000349038 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
PTBP1-201ENST00000349038 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
PTBP1-201ENST00000349038 MTHFSP49914 203 aa18.65■□□□□ 0.58
PTBP1-201ENST00000349038 DYNC1I1O14576 645 aa18.64■□□□□ 0.57
PTBP1-201ENST00000349038 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
PTBP1-201ENST00000349038 ADGRB3O60242 1522 aa18.64■□□□□ 0.57
PTBP1-201ENST00000349038 QRICH2Q9H0J4 1663 aa18.64■□□□□ 0.57
PTBP1-201ENST00000349038 AK9Q5TCS8 1911 aa18.64■□□□□ 0.57
PTBP1-201ENST00000349038 TBC1D9Q6ZT07 1266 aa18.64■□□□□ 0.57
PTBP1-201ENST00000349038 CCDC94Q9BW85 323 aaPredicted RBP18.63■□□□□ 0.57
PTBP1-201ENST00000349038 NOS1P29475 1434 aa18.63■□□□□ 0.57
PTBP1-201ENST00000349038 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
PTBP1-201ENST00000349038 ATP2B3Q16720 1220 aa18.63■□□□□ 0.57
PTBP1-201ENST00000349038 KIAA2012Q0VF49 1180 aa18.62■□□□□ 0.57
PTBP1-201ENST00000349038 HDAC1Q13547 482 aaPredicted RBP18.62■□□□□ 0.57
PTBP1-201ENST00000349038 CSPP1Q1MSJ5 1256 aa18.62■□□□□ 0.57
PTBP1-201ENST00000349038 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
PTBP1-201ENST00000349038 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
PTBP1-201ENST00000349038 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
PTBP1-201ENST00000349038 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
PTBP1-201ENST00000349038 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
PTBP1-201ENST00000349038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.62■□□□□ 0.572e-6■■■□□ 15.4
PTBP1-201ENST00000349038 USP25Q9UHP3 1055 aa18.61■□□□□ 0.57
PTBP1-201ENST00000349038 FANCAO15360 1455 aa18.61■□□□□ 0.57
PTBP1-201ENST00000349038 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-201ENST00000349038 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.577e-8■■■□□ 17.9
PTBP1-201ENST00000349038 LMTK2Q8IWU2 1503 aa18.6■□□□□ 0.57
PTBP1-201ENST00000349038 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
PTBP1-201ENST00000349038 CIZ1Q9ULV3 898 aaPredicted RBP18.6■□□□□ 0.57
PTBP1-201ENST00000349038 GPT2Q8TD30 523 aa18.6■□□□□ 0.57
PTBP1-201ENST00000349038 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
PTBP1-201ENST00000349038 DDX19BQ9UMR2 479 aa18.6■□□□□ 0.57
PTBP1-201ENST00000349038 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
PTBP1-201ENST00000349038 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
PTBP1-201ENST00000349038 NCOA3Q9Y6Q9 1424 aa18.59■□□□□ 0.57
PTBP1-201ENST00000349038 C14orf93Q9H972 538 aaKnown RBP18.58■□□□□ 0.57
PTBP1-201ENST00000349038 KIF16BQ96L93 1317 aa18.58■□□□□ 0.57
PTBP1-201ENST00000349038 DMTNQ08495 405 aa18.58■□□□□ 0.57
PTBP1-201ENST00000349038 LMBRD1Q9NUN5 540 aa18.58■□□□□ 0.57
PTBP1-201ENST00000349038 NSD2O96028 1365 aa18.58■□□□□ 0.56
PTBP1-201ENST00000349038 KIF2CQ99661 725 aa18.58■□□□□ 0.56
PTBP1-201ENST00000349038 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
PTBP1-201ENST00000349038 CD109Q6YHK3 1445 aa18.57■□□□□ 0.56
PTBP1-201ENST00000349038 DDIT3P35638 169 aa18.56■□□□□ 0.56
PTBP1-201ENST00000349038 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
PTBP1-201ENST00000349038 PPLO60437 1756 aa18.56■□□□□ 0.56
PTBP1-201ENST00000349038 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
PTBP1-201ENST00000349038 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-201ENST00000349038 ZNF500O60304 480 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-201ENST00000349038 C16orf71Q8IYS4 520 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-201ENST00000349038 SNX21Q969T3 373 aa18.56■□□□□ 0.56
PTBP1-201ENST00000349038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.55■□□□□ 0.56
PTBP1-201ENST00000349038 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
PTBP1-201ENST00000349038 PTMSP20962 102 aa18.55■□□□□ 0.56
PTBP1-201ENST00000349038 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
PTBP1-201ENST00000349038 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
PTBP1-201ENST00000349038 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
PTBP1-201ENST00000349038 ANKRD36BQ8N2N9 1353 aa18.54■□□□□ 0.56
PTBP1-201ENST00000349038 ERICH4A6NGS2 130 aa18.54■□□□□ 0.56
PTBP1-201ENST00000349038 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
PTBP1-201ENST00000349038 CFAP74Q9C0B2 1584 aa18.54■□□□□ 0.56
PTBP1-201ENST00000349038 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
PTBP1-201ENST00000349038 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
PTBP1-201ENST00000349038 NPHP1O15259 732 aa18.52■□□□□ 0.56
PTBP1-201ENST00000349038 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
PTBP1-201ENST00000349038 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.56
PTBP1-201ENST00000349038 NUCB2P80303 420 aa18.52■□□□□ 0.56
PTBP1-201ENST00000349038 ZNF710Q8N1W2 664 aa18.52■□□□□ 0.56
PTBP1-201ENST00000349038 THUMPD2Q9BTF0 503 aaKnown RBP18.52■□□□□ 0.56
PTBP1-201ENST00000349038 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
PTBP1-201ENST00000349038 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
PTBP1-201ENST00000349038 NOLC1Q14978 699 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■□□□ 11.7
PTBP1-201ENST00000349038 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
PTBP1-201ENST00000349038 ZNF445P59923 1031 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 ZNF592Q92610 1267 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 NEO1Q92859 1461 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 IL16Q14005 1332 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 SMARCA5O60264 1052 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-201ENST00000349038 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
PTBP1-201ENST00000349038 NUCB1Q02818 461 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
PTBP1-201ENST00000349038 KIDINS220Q9ULH0 1771 aa18.49■□□□□ 0.55
PTBP1-201ENST00000349038 TSPY26PQ9H489 355 aa18.49■□□□□ 0.55
PTBP1-201ENST00000349038 NEK4P51957 841 aa18.49■□□□□ 0.55
PTBP1-201ENST00000349038 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
PTBP1-201ENST00000349038 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-201ENST00000349038 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-201ENST00000349038 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
PTBP1-201ENST00000349038 MYRIPQ8NFW9 859 aa18.48■□□□□ 0.55
PTBP1-201ENST00000349038 NPATQ14207 1427 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms