RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
ERGIC3-202ENST00000348547 SLIT2O94813 1529 aa17.31■□□□□ 0.36
ERGIC3-202ENST00000348547 MTHFSP49914 203 aa17.3■□□□□ 0.36
ERGIC3-202ENST00000348547 RALBP1Q15311 655 aa17.3■□□□□ 0.36
ERGIC3-202ENST00000348547 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-202ENST00000348547 HOXC9P31274 260 aa17.29■□□□□ 0.36
ERGIC3-202ENST00000348547 HSP90AB2PQ58FF8 381 aa17.29■□□□□ 0.36
ERGIC3-202ENST00000348547 MIER1Q8N108 512 aa17.29■□□□□ 0.36
ERGIC3-202ENST00000348547 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-202ENST00000348547 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-202ENST00000348547 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
ERGIC3-202ENST00000348547 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-202ENST00000348547 INSRP06213 1382 aa17.28■□□□□ 0.36
ERGIC3-202ENST00000348547 BCL9LQ86UU0 1499 aa17.28■□□□□ 0.36
ERGIC3-202ENST00000348547 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
ERGIC3-202ENST00000348547 PRDM11Q9NQV5 511 aa17.28■□□□□ 0.36
ERGIC3-202ENST00000348547 FLT4P35916 1363 aa17.27■□□□□ 0.36
ERGIC3-202ENST00000348547 IP6K1Q92551 441 aa17.27■□□□□ 0.35
ERGIC3-202ENST00000348547 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.35
ERGIC3-202ENST00000348547 HAP1P54257 671 aaPredicted RBP17.26■□□□□ 0.35
ERGIC3-202ENST00000348547 WNK3Q9BYP7 1800 aa17.25■□□□□ 0.35
ERGIC3-202ENST00000348547 BLMP54132 1417 aaPredicted RBP17.25■□□□□ 0.35
ERGIC3-202ENST00000348547 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
ERGIC3-202ENST00000348547 ANP32CO43423 234 aa17.25■□□□□ 0.35
ERGIC3-202ENST00000348547 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
ERGIC3-202ENST00000348547 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-202ENST00000348547 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
ERGIC3-202ENST00000348547 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
ERGIC3-202ENST00000348547 EP400Q96L91 3159 aa17.23■□□□□ 0.35
ERGIC3-202ENST00000348547 ERBB3P21860 1342 aa17.22■□□□□ 0.35
ERGIC3-202ENST00000348547 AMPHP49418 695 aa17.22■□□□□ 0.35
ERGIC3-202ENST00000348547 FNBP4Q8N3X1 1017 aaPredicted RBP17.22■□□□□ 0.35
ERGIC3-202ENST00000348547 GLI3P10071 1580 aa17.21■□□□□ 0.35
ERGIC3-202ENST00000348547 IL13P35225 146 aa17.21■□□□□ 0.35
ERGIC3-202ENST00000348547 AFF2P51816 1311 aa17.2■□□□□ 0.34
ERGIC3-202ENST00000348547 ANKRD24Q8TF21 1146 aa17.2■□□□□ 0.34
ERGIC3-202ENST00000348547 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-202ENST00000348547 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
ERGIC3-202ENST00000348547 RGS17Q9UGC6 210 aaPredicted RBP17.19■□□□□ 0.34
ERGIC3-202ENST00000348547 ATRNO75882 1429 aa17.18■□□□□ 0.34
ERGIC3-202ENST00000348547 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
ERGIC3-202ENST00000348547 NGLY1Q96IV0 654 aa17.18■□□□□ 0.34
ERGIC3-202ENST00000348547 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
ERGIC3-202ENST00000348547 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
ERGIC3-202ENST00000348547 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
ERGIC3-202ENST00000348547 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
ERGIC3-202ENST00000348547 USHBP1Q8N6Y0 703 aa17.16■□□□□ 0.34
ERGIC3-202ENST00000348547 EYA1Q99502 592 aa17.16■□□□□ 0.34
ERGIC3-202ENST00000348547 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
ERGIC3-202ENST00000348547 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
ERGIC3-202ENST00000348547 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
ERGIC3-202ENST00000348547 CRB1P82279 1406 aa17.15■□□□□ 0.34
ERGIC3-202ENST00000348547 MEGF6O75095 1541 aa17.15■□□□□ 0.34
ERGIC3-202ENST00000348547 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
ERGIC3-202ENST00000348547 THSD7AQ9UPZ6 1657 aa17.14■□□□□ 0.34
ERGIC3-202ENST00000348547 DISP2A7MBM2 1401 aa17.14■□□□□ 0.33
ERGIC3-202ENST00000348547 KDRP35968 1356 aa17.14■□□□□ 0.33
ERGIC3-202ENST00000348547 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-202ENST00000348547 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-202ENST00000348547 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
ERGIC3-202ENST00000348547 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
ERGIC3-202ENST00000348547 USP21Q9UK80 565 aa17.13■□□□□ 0.33
ERGIC3-202ENST00000348547 LRRC37A3O60309 1634 aa17.13■□□□□ 0.33
ERGIC3-202ENST00000348547 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
ERGIC3-202ENST00000348547 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
ERGIC3-202ENST00000348547 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
ERGIC3-202ENST00000348547 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
ERGIC3-202ENST00000348547 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
ERGIC3-202ENST00000348547 VPS72Q15906 364 aa17.11■□□□□ 0.33
ERGIC3-202ENST00000348547 CFAP53Q96M91 514 aa17.1■□□□□ 0.33
ERGIC3-202ENST00000348547 CARD10Q9BWT7 1032 aa17.1■□□□□ 0.33
ERGIC3-202ENST00000348547 NLRP2Q9NX02 1062 aa17.1■□□□□ 0.33
ERGIC3-202ENST00000348547 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
ERGIC3-202ENST00000348547 HMOX1P09601 288 aa17.09■□□□□ 0.33
ERGIC3-202ENST00000348547 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
ERGIC3-202ENST00000348547 POTEAQ6S8J7 498 aa17.08■□□□□ 0.32
ERGIC3-202ENST00000348547 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.32
ERGIC3-202ENST00000348547 RSPH6AQ9H0K4 717 aa17.08■□□□□ 0.32
ERGIC3-202ENST00000348547 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
ERGIC3-202ENST00000348547 DLG5Q8TDM6 1919 aa17.07■□□□□ 0.32
ERGIC3-202ENST00000348547 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
ERGIC3-202ENST00000348547 EVA1CP58658 441 aa17.07■□□□□ 0.32
ERGIC3-202ENST00000348547 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
ERGIC3-202ENST00000348547 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
ERGIC3-202ENST00000348547 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
ERGIC3-202ENST00000348547 U2AF1L5P0DN76 240 aaPredicted RBP17.05■□□□□ 0.32
ERGIC3-202ENST00000348547 U2AF1Q01081 240 aaKnown RBP eCLIP17.05■□□□□ 0.32
ERGIC3-202ENST00000348547 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
ERGIC3-202ENST00000348547 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
ERGIC3-202ENST00000348547 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
ERGIC3-202ENST00000348547 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
ERGIC3-202ENST00000348547 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
ERGIC3-202ENST00000348547 TOGARAM1Q9Y4F4 1720 aa17.03■□□□□ 0.32
ERGIC3-202ENST00000348547 CCDC146Q8IYE0 955 aa17.02■□□□□ 0.32
ERGIC3-202ENST00000348547 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
ERGIC3-202ENST00000348547 TRPC5Q9UL62 973 aaPredicted RBP17.02■□□□□ 0.32
ERGIC3-202ENST00000348547 ADAMTS7Q9UKP4 1686 aa17.02■□□□□ 0.31
ERGIC3-202ENST00000348547 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.31
ERGIC3-202ENST00000348547 PRKAR2BP31323 418 aa17.02■□□□□ 0.31
ERGIC3-202ENST00000348547 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms