RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 EVA1CP58658 441 aa14□□□□□ -0.17
MRPL55-204ENST00000348259 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
MRPL55-204ENST00000348259 PROM2Q8N271 834 aa14□□□□□ -0.17
MRPL55-204ENST00000348259 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
MRPL55-204ENST00000348259 PAPPAQ13219 1627 aa13.98□□□□□ -0.17
MRPL55-204ENST00000348259 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
MRPL55-204ENST00000348259 NFAT5O94916 1531 aa13.97□□□□□ -0.17
MRPL55-204ENST00000348259 PTGER2P43116 358 aa13.97□□□□□ -0.17
MRPL55-204ENST00000348259 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
MRPL55-204ENST00000348259 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
MRPL55-204ENST00000348259 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
MRPL55-204ENST00000348259 ABCC6O95255 1503 aa13.96□□□□□ -0.17
MRPL55-204ENST00000348259 CHD4Q14839 1912 aa13.96□□□□□ -0.17
MRPL55-204ENST00000348259 NHSQ6T4R5 1651 aa13.96□□□□□ -0.17
MRPL55-204ENST00000348259 BCL11BQ9C0K0 894 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-204ENST00000348259 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.18
MRPL55-204ENST00000348259 COL24A1Q17RW2 1714 aa13.95□□□□□ -0.18
MRPL55-204ENST00000348259 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-204ENST00000348259 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
MRPL55-204ENST00000348259 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
MRPL55-204ENST00000348259 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
MRPL55-204ENST00000348259 CENPJQ9HC77 1338 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-204ENST00000348259 DDB1Q16531 1140 aa13.93□□□□□ -0.18
MRPL55-204ENST00000348259 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
MRPL55-204ENST00000348259 MON2Q7Z3U7 1717 aa13.93□□□□□ -0.18
MRPL55-204ENST00000348259 ARHGEF25Q86VW2 580 aa13.92□□□□□ -0.18
MRPL55-204ENST00000348259 PPP1R1BQ9UD71 204 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-204ENST00000348259 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
MRPL55-204ENST00000348259 GOLGB1Q14789 3259 aaKnown RBP13.91□□□□□ -0.18
MRPL55-204ENST00000348259 TNS2Q63HR2 1409 aa13.9□□□□□ -0.18
MRPL55-204ENST00000348259 NLRP6P59044 892 aa13.9□□□□□ -0.18
MRPL55-204ENST00000348259 SRPK2P78362 688 aaKnown RBP13.9□□□□□ -0.18
MRPL55-204ENST00000348259 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-204ENST00000348259 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
MRPL55-204ENST00000348259 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
MRPL55-204ENST00000348259 BTAF1O14981 1849 aa13.9□□□□□ -0.18
MRPL55-204ENST00000348259 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
MRPL55-204ENST00000348259 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
MRPL55-204ENST00000348259 ZBTB7AO95365 584 aa13.88□□□□□ -0.19
MRPL55-204ENST00000348259 SLC15A2Q16348 729 aa13.88□□□□□ -0.19
MRPL55-204ENST00000348259 TXNRD1Q16881 649 aa13.88□□□□□ -0.19
MRPL55-204ENST00000348259 TOM1L2Q6ZVM7 507 aa13.88□□□□□ -0.19
MRPL55-204ENST00000348259 ZNF784Q8NCA9 323 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-204ENST00000348259 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
MRPL55-204ENST00000348259 LTN1O94822 1766 aa13.87□□□□□ -0.19
MRPL55-204ENST00000348259 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
MRPL55-204ENST00000348259 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
MRPL55-204ENST00000348259 SYT17Q9BSW7 474 aa13.86□□□□□ -0.19
MRPL55-204ENST00000348259 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
MRPL55-204ENST00000348259 TTC21AQ8NDW8 1320 aa13.85□□□□□ -0.19
MRPL55-204ENST00000348259 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
MRPL55-204ENST00000348259 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
MRPL55-204ENST00000348259 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
MRPL55-204ENST00000348259 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
MRPL55-204ENST00000348259 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
MRPL55-204ENST00000348259 KCNH5Q8NCM2 988 aa13.83□□□□□ -0.2
MRPL55-204ENST00000348259 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
MRPL55-204ENST00000348259 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
MRPL55-204ENST00000348259 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
MRPL55-204ENST00000348259 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
MRPL55-204ENST00000348259 EVC2Q86UK5 1308 aa13.82□□□□□ -0.2
MRPL55-204ENST00000348259 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
MRPL55-204ENST00000348259 EXOC5O00471 708 aa13.81□□□□□ -0.2
MRPL55-204ENST00000348259 ERBB3P21860 1342 aa13.81□□□□□ -0.2
MRPL55-204ENST00000348259 SBNO2Q9Y2G9 1366 aa13.81□□□□□ -0.2
MRPL55-204ENST00000348259 LY75O60449 1722 aa13.81□□□□□ -0.2
MRPL55-204ENST00000348259 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
MRPL55-204ENST00000348259 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
MRPL55-204ENST00000348259 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
MRPL55-204ENST00000348259 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
MRPL55-204ENST00000348259 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
MRPL55-204ENST00000348259 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
MRPL55-204ENST00000348259 ARXQ96QS3 562 aa13.77□□□□□ -0.21
MRPL55-204ENST00000348259 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
MRPL55-204ENST00000348259 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
MRPL55-204ENST00000348259 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
MRPL55-204ENST00000348259 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
MRPL55-204ENST00000348259 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
MRPL55-204ENST00000348259 NSD2O96028 1365 aa13.74□□□□□ -0.21
MRPL55-204ENST00000348259 RGPD2P0DJD1 1756 aa13.74□□□□□ -0.21
MRPL55-204ENST00000348259 SOX12O15370 315 aa13.74□□□□□ -0.21
MRPL55-204ENST00000348259 IL2RBP14784 551 aa13.74□□□□□ -0.21
MRPL55-204ENST00000348259 SIN3AQ96ST3 1273 aa13.74□□□□□ -0.21
MRPL55-204ENST00000348259 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
MRPL55-204ENST00000348259 ROCK2O75116 1388 aaKnown RBP13.72□□□□□ -0.21
MRPL55-204ENST00000348259 NME9Q86XW9 330 aa13.72□□□□□ -0.21
MRPL55-204ENST00000348259 SLC16A10Q8TF71 515 aa13.72□□□□□ -0.21
MRPL55-204ENST00000348259 EDC4Q6P2E9 1401 aaKnown RBP13.72□□□□□ -0.21
MRPL55-204ENST00000348259 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
MRPL55-204ENST00000348259 SENP3-EIF4A1A0A087X0R7 540 aa13.7□□□□□ -0.22
MRPL55-204ENST00000348259 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
MRPL55-204ENST00000348259 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
MRPL55-204ENST00000348259 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
MRPL55-204ENST00000348259 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
MRPL55-204ENST00000348259 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
MRPL55-204ENST00000348259 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
MRPL55-204ENST00000348259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
MRPL55-204ENST00000348259 C5P01031 1676 aa13.67□□□□□ -0.22
MRPL55-204ENST00000348259 NLGN2Q8NFZ4 835 aa13.67□□□□□ -0.22
MRPL55-204ENST00000348259 IP6K1Q92551 441 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms