RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 UNC5CLQ8IV45 518 aa32■■■□□ 2.71
MADCAM1-202ENST00000346144 MAP3K19Q56UN5 1328 aa31.99■■■□□ 2.71
MADCAM1-202ENST00000346144 CC2D1BQ5T0F9 858 aaKnown RBP31.99■■■□□ 2.71
MADCAM1-202ENST00000346144 POTEAQ6S8J7 498 aa31.97■■■□□ 2.71
MADCAM1-202ENST00000346144 ATRNO75882 1429 aa31.96■■■□□ 2.71
MADCAM1-202ENST00000346144 COL5A2P05997 1499 aaPredicted RBP31.96■■■□□ 2.71
MADCAM1-202ENST00000346144 RRS1Q15050 365 aaKnown RBP31.96■■■□□ 2.71
MADCAM1-202ENST00000346144 RTL1A6NKG5 1358 aa31.95■■■□□ 2.71
MADCAM1-202ENST00000346144 PEAK1Q9H792 1746 aa31.95■■■□□ 2.71
MADCAM1-202ENST00000346144 AXIN2Q9Y2T1 843 aa31.95■■■□□ 2.7
MADCAM1-202ENST00000346144 TNNT2P45379 298 aaPredicted RBP31.94■■■□□ 2.7
MADCAM1-202ENST00000346144 TRPC5Q9UL62 973 aaPredicted RBP31.94■■■□□ 2.7
MADCAM1-202ENST00000346144 KIF24Q5T7B8 1368 aa31.93■■■□□ 2.7
MADCAM1-202ENST00000346144 IP6K1Q92551 441 aa31.93■■■□□ 2.7
MADCAM1-202ENST00000346144 BLMP54132 1417 aaPredicted RBP31.92■■■□□ 2.7
MADCAM1-202ENST00000346144 AMPHP49418 695 aa31.92■■■□□ 2.7
MADCAM1-202ENST00000346144 QTRT2Q9H974 415 aaKnown RBP31.92■■■□□ 2.7
MADCAM1-202ENST00000346144 HOXC9P31274 260 aa31.9■■■□□ 2.7
MADCAM1-202ENST00000346144 VPS72Q15906 364 aa31.9■■■□□ 2.7
MADCAM1-202ENST00000346144 STRN4Q9NRL3 753 aa31.9■■■□□ 2.7
MADCAM1-202ENST00000346144 FLT4P35916 1363 aa31.89■■■□□ 2.7
MADCAM1-202ENST00000346144 EVA1CP58658 441 aa31.89■■■□□ 2.7
MADCAM1-202ENST00000346144 CNGB1Q14028 1251 aaPredicted RBP31.89■■■□□ 2.7
MADCAM1-202ENST00000346144 POLKQ9UBT6 870 aa31.89■■■□□ 2.7
MADCAM1-202ENST00000346144 EMILIN1Q9Y6C2 1016 aa31.89■■■□□ 2.7
MADCAM1-202ENST00000346144 SMG6Q86US8 1419 aaKnown RBP31.88■■■□□ 2.69
MADCAM1-202ENST00000346144 GLI3P10071 1580 aa31.85■■■□□ 2.69
MADCAM1-202ENST00000346144 FAM208AQ9UK61 1670 aaKnown RBP31.85■■■□□ 2.69
MADCAM1-202ENST00000346144 ERBB3P21860 1342 aa31.84■■■□□ 2.69
MADCAM1-202ENST00000346144 WDR17Q8IZU2 1322 aa31.84■■■□□ 2.69
MADCAM1-202ENST00000346144 LARP1Q6PKG0 1096 aaKnown RBP31.83■■■□□ 2.69
MADCAM1-202ENST00000346144 GJD4Q96KN9 370 aaPredicted RBP31.83■■■□□ 2.69
MADCAM1-202ENST00000346144 CRB1P82279 1406 aa31.83■■■□□ 2.69
MADCAM1-202ENST00000346144 INSRP06213 1382 aa31.83■■■□□ 2.69
MADCAM1-202ENST00000346144 SPATA31A5Q5VU36 1347 aa31.83■■■□□ 2.69
MADCAM1-202ENST00000346144 SPATA31A7Q8IWB4 1347 aa31.83■■■□□ 2.69
MADCAM1-202ENST00000346144 PPM1GO15355 546 aaPredicted RBP31.82■■■□□ 2.68
MADCAM1-202ENST00000346144 RBM6P78332 1123 aaKnown RBP31.82■■■□□ 2.68
MADCAM1-202ENST00000346144 CCDC9Q9Y3X0 531 aaKnown RBP31.82■■■□□ 2.68
MADCAM1-202ENST00000346144 ANKRD24Q8TF21 1146 aa31.81■■■□□ 2.68
MADCAM1-202ENST00000346144 CDK12Q9NYV4 1490 aaPredicted RBP31.81■■■□□ 2.68
MADCAM1-202ENST00000346144 RXRBP28702 533 aa31.8■■■□□ 2.68
MADCAM1-202ENST00000346144 PARD3Q8TEW0 1356 aa31.8■■■□□ 2.68
MADCAM1-202ENST00000346144 CSB-PGBD3P0DP91 1061 aa31.79■■■□□ 2.68
MADCAM1-202ENST00000346144 HSP90AB2PQ58FF8 381 aa31.79■■■□□ 2.68
MADCAM1-202ENST00000346144 SPATA31A1Q5TZJ5 1347 aa31.79■■■□□ 2.68
MADCAM1-202ENST00000346144 TOM1L2Q6ZVM7 507 aa31.77■■■□□ 2.68
MADCAM1-202ENST00000346144 LTV1Q96GA3 475 aaPredicted RBP31.75■■■□□ 2.67
MADCAM1-202ENST00000346144 RGPD2P0DJD1 1756 aa31.75■■■□□ 2.67
MADCAM1-202ENST00000346144 MTHFSP49914 203 aa31.75■■■□□ 2.67
MADCAM1-202ENST00000346144 CARD10Q9BWT7 1032 aa31.74■■■□□ 2.67
MADCAM1-202ENST00000346144 WNK3Q9BYP7 1800 aa31.73■■■□□ 2.67
MADCAM1-202ENST00000346144 PPP2R1AP30153 589 aa31.72■■■□□ 2.67
MADCAM1-202ENST00000346144 RALBP1Q15311 655 aa31.72■■■□□ 2.67
MADCAM1-202ENST00000346144 USP35Q9P2H5 1018 aa31.72■■■□□ 2.67
MADCAM1-202ENST00000346144 THRAP3Q9Y2W1 955 aaKnown RBP31.72■■■□□ 2.67
MADCAM1-202ENST00000346144 TCP11L2Q8N4U5 519 aa31.71■■■□□ 2.67
MADCAM1-202ENST00000346144 NLRP2Q9NX02 1062 aa31.71■■■□□ 2.67
MADCAM1-202ENST00000346144 THSD7AQ9UPZ6 1657 aa31.69■■■□□ 2.66
MADCAM1-202ENST00000346144 BARGINQ6ZT62 677 aa31.69■■■□□ 2.66
MADCAM1-202ENST00000346144 ONECUT3O60422 494 aaPredicted RBP31.68■■■□□ 2.66
MADCAM1-202ENST00000346144 RGS12O14924 1447 aa31.68■■■□□ 2.66
MADCAM1-202ENST00000346144 EIF4A2Q14240 407 aaKnown RBP31.67■■■□□ 2.66
MADCAM1-202ENST00000346144 FAM98CQ17RN3 349 aaKnown RBP31.67■■■□□ 2.66
MADCAM1-202ENST00000346144 COL3A1P02461 1466 aaPredicted RBP31.64■■■□□ 2.66
MADCAM1-202ENST00000346144 NBPF6Q5VWK0 638 aa31.64■■■□□ 2.66
MADCAM1-202ENST00000346144 NBPF4Q96M43 638 aa31.64■■■□□ 2.66
MADCAM1-202ENST00000346144 PRKRIP1Q9H875 184 aaPredicted RBP31.64■■■□□ 2.66
MADCAM1-202ENST00000346144 PARP4Q9UKK3 1724 aaKnown RBP31.64■■■□□ 2.65
MADCAM1-202ENST00000346144 DISP2A7MBM2 1401 aa31.61■■■□□ 2.65
MADCAM1-202ENST00000346144 NCAPD2Q15021 1401 aa31.61■■■□□ 2.65
MADCAM1-202ENST00000346144 RGPD1P0DJD0 1748 aa31.61■■■□□ 2.65
MADCAM1-202ENST00000346144 BRWD3Q6RI45 1802 aa31.61■■■□□ 2.65
MADCAM1-202ENST00000346144 SEPT12Q8IYM1 358 aa31.6■■■□□ 2.65
MADCAM1-202ENST00000346144 MYBBP1AQ9BQG0 1328 aaKnown RBP31.59■■■□□ 2.65
MADCAM1-202ENST00000346144 CFAP53Q96M91 514 aa31.59■■■□□ 2.65
MADCAM1-202ENST00000346144 A0A0G2JS52 829 aa31.58■■■□□ 2.65
MADCAM1-202ENST00000346144 IL13P35225 146 aa31.58■■■□□ 2.65
MADCAM1-202ENST00000346144 MYT1Q01538 1121 aa31.58■■■□□ 2.65
MADCAM1-202ENST00000346144 EYA1Q99502 592 aa31.58■■■□□ 2.65
MADCAM1-202ENST00000346144 CDCA7Q9BWT1 371 aaPredicted RBP31.58■■■□□ 2.65
MADCAM1-202ENST00000346144 LRRC37A3O60309 1634 aa31.57■■■□□ 2.65
MADCAM1-202ENST00000346144 DIAPH1O60610 1272 aaKnown RBP31.56■■■□□ 2.64
MADCAM1-202ENST00000346144 USHBP1Q8N6Y0 703 aa31.56■■■□□ 2.64
MADCAM1-202ENST00000346144 IGSF1Q8N6C5 1336 aa31.56■■■□□ 2.64
MADCAM1-202ENST00000346144 IL2RBP14784 551 aa31.54■■■□□ 2.64
MADCAM1-202ENST00000346144 ANP32CO43423 234 aa31.52■■■□□ 2.64
MADCAM1-202ENST00000346144 MEGF6O75095 1541 aa31.51■■■□□ 2.64
MADCAM1-202ENST00000346144 OVOS2A0A0G2JMS6 1433 aa31.48■■■□□ 2.63
MADCAM1-202ENST00000346144 TNS2Q63HR2 1409 aa31.48■■■□□ 2.63
MADCAM1-202ENST00000346144 DDB1Q16531 1140 aa31.48■■■□□ 2.63
MADCAM1-202ENST00000346144 RAPGEF4Q8WZA2 1011 aa31.48■■■□□ 2.63
MADCAM1-202ENST00000346144 KDRP35968 1356 aa31.46■■■□□ 2.63
MADCAM1-202ENST00000346144 KRT27Q7Z3Y8 459 aa31.46■■■□□ 2.63
MADCAM1-202ENST00000346144 TATP17735 454 aaPredicted RBP31.45■■■□□ 2.62
MADCAM1-202ENST00000346144 NUDCQ9Y266 331 aa31.45■■■□□ 2.62
MADCAM1-202ENST00000346144 PKD1L3Q7Z443 1732 aa31.44■■■□□ 2.62
MADCAM1-202ENST00000346144 SHANK3Q9BYB0 1731 aa31.44■■■□□ 2.62
MADCAM1-202ENST00000346144 EXOC5O00471 708 aa31.44■■■□□ 2.62
MADCAM1-202ENST00000346144 PDE3BQ13370 1112 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms