RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 XBP1P17861 261 aa20.69■□□□□ 0.9
SPAST-202ENST00000345662 TBC1D32Q96NH3 1257 aa20.69■□□□□ 0.9
SPAST-202ENST00000345662 CFAP45Q9UL16 551 aa20.69■□□□□ 0.9
SPAST-202ENST00000345662 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
SPAST-202ENST00000345662 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
SPAST-202ENST00000345662 PPFIBP1Q86W92 1011 aa20.68■□□□□ 0.9
SPAST-202ENST00000345662 RPAP2Q8IXW5 612 aaPredicted RBP20.68■□□□□ 0.9
SPAST-202ENST00000345662 BRMS1Q9HCU9 246 aa20.68■□□□□ 0.9
SPAST-202ENST00000345662 TMEM132EQ6IEE7 984 aa20.68■□□□□ 0.9
SPAST-202ENST00000345662 PRXQ9BXM0 1461 aa20.68■□□□□ 0.9
SPAST-202ENST00000345662 RARSP54136 660 aaKnown RBP20.68■□□□□ 0.9
SPAST-202ENST00000345662 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
SPAST-202ENST00000345662 PPP4R3BQ5MIZ7 849 aa20.68■□□□□ 0.9
SPAST-202ENST00000345662 UPF3BQ9BZI7 483 aaKnown RBP20.68■□□□□ 0.9
SPAST-202ENST00000345662 OFD1O75665 1012 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 BRPF1P55201 1214 aaPredicted RBP20.67■□□□□ 0.9
SPAST-202ENST00000345662 STK3Q13188 491 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 KLHL40Q2TBA0 621 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 KIF18AQ8NI77 898 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 PRIMPOLQ96LW4 560 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 PDRG1Q9NUG6 133 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 EHBP1L1Q8N3D4 1523 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 HSP90AB3PQ58FF7 597 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 USP25Q9UHP3 1055 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 NAIPQ13075 1403 aa20.67■□□□□ 0.9
SPAST-202ENST00000345662 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
SPAST-202ENST00000345662 DACH1Q9UI36 760 aa20.66■□□□□ 0.9
SPAST-202ENST00000345662 SLC12A5Q9H2X9 1139 aa20.66■□□□□ 0.9
SPAST-202ENST00000345662 NCOA1Q15788 1441 aa20.66■□□□□ 0.9
SPAST-202ENST00000345662 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
SPAST-202ENST00000345662 MYO6Q9UM54 1294 aa20.66■□□□□ 0.9
SPAST-202ENST00000345662 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
SPAST-202ENST00000345662 AMOTL1Q8IY63 956 aa20.65■□□□□ 0.9
SPAST-202ENST00000345662 BLOC1S2Q6QNY1 142 aa20.65■□□□□ 0.9
SPAST-202ENST00000345662 CCDC102AQ96A19 550 aa20.64■□□□□ 0.89
SPAST-202ENST00000345662 BAG4O95429 457 aaKnown RBP20.64■□□□□ 0.89
SPAST-202ENST00000345662 JAKMIP1Q96N16 626 aaKnown RBP20.63■□□□□ 0.89
SPAST-202ENST00000345662 TNNT1P13805 278 aa20.63■□□□□ 0.89
SPAST-202ENST00000345662 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
SPAST-202ENST00000345662 ZNHIT6Q9NWK9 470 aaKnown RBP20.63■□□□□ 0.89
SPAST-202ENST00000345662 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
SPAST-202ENST00000345662 SMTNL1A8MU46 457 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
SPAST-202ENST00000345662 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 GOLGA6L10A6NI86 522 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 ATP2B1P20020 1258 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
SPAST-202ENST00000345662 EFCAB5A4FU69 1503 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 PANK2Q9BZ23 570 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 PLEKHH1Q9ULM0 1364 aa20.62■□□□□ 0.89
SPAST-202ENST00000345662 SFPQP23246 707 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPAST-202ENST00000345662 CAMK4Q16566 473 aa20.61■□□□□ 0.89
SPAST-202ENST00000345662 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
SPAST-202ENST00000345662 MAP4K4O95819 1239 aaPredicted RBP20.6■□□□□ 0.89
SPAST-202ENST00000345662 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
SPAST-202ENST00000345662 SART3Q15020 963 aaKnown RBP20.6■□□□□ 0.89
SPAST-202ENST00000345662 EPS15P42566 896 aa20.59■□□□□ 0.89
SPAST-202ENST00000345662 C16orf45Q96MC5 204 aaPredicted RBP20.59■□□□□ 0.89
SPAST-202ENST00000345662 KDM4AO75164 1064 aa20.59■□□□□ 0.89
SPAST-202ENST00000345662 ADCY5O95622 1261 aa20.59■□□□□ 0.89
SPAST-202ENST00000345662 UVSSAQ2YD98 709 aa20.59■□□□□ 0.89
SPAST-202ENST00000345662 POLA1P09884 1462 aaPredicted RBP20.59■□□□□ 0.89
SPAST-202ENST00000345662 CLIP2Q9UDT6 1046 aa20.58■□□□□ 0.89
SPAST-202ENST00000345662 SCAND2PQ9GZW5 306 aaPredicted RBP20.58■□□□□ 0.88
SPAST-202ENST00000345662 SPDYE4A6NLX3 237 aa20.58■□□□□ 0.88
SPAST-202ENST00000345662 ZSCAN23Q3MJ62 389 aa20.58■□□□□ 0.88
SPAST-202ENST00000345662 NOL10Q9BSC4 688 aaKnown RBP20.58■□□□□ 0.88
SPAST-202ENST00000345662 DHX29Q7Z478 1369 aaKnown RBP20.58■□□□□ 0.88
SPAST-202ENST00000345662 NEMFO60524 1076 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
SPAST-202ENST00000345662 IGHDP01880 384 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
SPAST-202ENST00000345662 CCDC181Q5TID7 509 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 ZSCAN12O43309 604 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 CASTP20810 708 aaKnown RBP20.57■□□□□ 0.88
SPAST-202ENST00000345662 TXLNAP40222 546 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 IQCEQ6IPM2 695 aa20.57■□□□□ 0.88
SPAST-202ENST00000345662 CT47A1Q5JQC4 288 aaPredicted RBP20.56■□□□□ 0.88
SPAST-202ENST00000345662 FERMT3Q86UX7 667 aa20.56■□□□□ 0.88
SPAST-202ENST00000345662 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
SPAST-202ENST00000345662 GOLGA6L7A0A1B0GV03 622 aa20.56■□□□□ 0.88
SPAST-202ENST00000345662 BMP2KLQ5H9B9 411 aa20.56■□□□□ 0.88
SPAST-202ENST00000345662 KRT32Q14532 448 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 CFAP100Q494V2 611 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 ANO10Q9NW15 660 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 DAPK1P53355 1430 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 FAM193AP78312 1265 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 ALDH1L2Q3SY69 923 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 LRSAM1Q6UWE0 723 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 CCDC83Q8IWF9 413 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
SPAST-202ENST00000345662 G3V3G9 751 aa20.54■□□□□ 0.88
SPAST-202ENST00000345662 URI1O94763 535 aaPredicted RBP20.54■□□□□ 0.88
SPAST-202ENST00000345662 ARHGAP29Q52LW3 1261 aa20.54■□□□□ 0.88
SPAST-202ENST00000345662 DCAF8Q5TAQ9 597 aa20.54■□□□□ 0.88
SPAST-202ENST00000345662 FCHSD2O94868 740 aa20.54■□□□□ 0.88
SPAST-202ENST00000345662 ERLIN2O94905 339 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms