RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 BCAR3O75815 825 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 RBM26Q5T8P6 1007 aaKnown RBP7.76□□□□□ -1.17
PCDH18-201ENST00000344876 RUNDC1Q96C34 613 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 CDK5RAP3Q96JB5 506 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 SEPT11Q9NVA2 429 aaKnown RBP7.76□□□□□ -1.17
PCDH18-201ENST00000344876 MBD3O95983 291 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 CAMK4Q16566 473 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 EFCAB2Q5VUJ9 269 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 CNTROBQ8N137 903 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 ZBTB9Q96C00 473 aa7.76□□□□□ -1.17
PCDH18-201ENST00000344876 ATP2B2Q01814 1243 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 ESPNB1AK53 854 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 SIL1Q9H173 461 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 DHX57Q6P158 1386 aaKnown RBP7.75□□□□□ -1.17
PCDH18-201ENST00000344876 SYCP1Q15431 976 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 PPFIBP1Q86W92 1011 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 MYCBPQ99417 103 aaPredicted RBP7.75□□□□□ -1.17
PCDH18-201ENST00000344876 PSMA5P28066 241 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 POLD1P28340 1107 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 RBM33Q96EV2 1170 aaKnown RBP7.75□□□□□ -1.17
PCDH18-201ENST00000344876 MKL2Q9ULH7 1088 aa7.75□□□□□ -1.17
PCDH18-201ENST00000344876 GOLGA6L7A0A1B0GV03 622 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 POLR3GO15318 223 aaPredicted RBP7.74□□□□□ -1.17
PCDH18-201ENST00000344876 GBP2P32456 591 aaPredicted RBP7.74□□□□□ -1.17
PCDH18-201ENST00000344876 PDCL2Q8N4E4 241 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 TSR2Q969E8 191 aaKnown RBP7.74□□□□□ -1.17
PCDH18-201ENST00000344876 CCDC192P0DO97 292 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 MIPOL1Q8TD10 442 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 EVC2Q86UK5 1308 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 XBP1P17861 261 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 BTN2A1Q7KYR7 527 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 DNA2P51530 1060 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 AP1ARQ63HQ0 302 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 ERCC6Q03468 1493 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 SYCE3A1L190 88 aa7.74□□□□□ -1.17
PCDH18-201ENST00000344876 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 FAM114A1Q8IWE2 563 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 SRRTQ9BXP5 876 aaKnown RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 LRRCC1Q9C099 1032 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 EXOSC9Q06265 439 aaKnown RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 CLASRPQ8N2M8 674 aaKnown RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 CCDC113Q9H0I3 377 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 SECISBP2LQ93073 1101 aaKnown RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 SPDYE4A6NLX3 237 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 ERLIN2O94905 339 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 HDAC1Q13547 482 aaPredicted RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 DBN1Q16643 649 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 NUP133Q8WUM0 1156 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 MNAT1P51948 309 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 GNAI1P63096 354 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 DDX54Q8TDD1 881 aaKnown RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 DNAAF4Q8WXU2 420 aa7.73□□□□□ -1.17
PCDH18-201ENST00000344876 NOB1Q9ULX3 412 aaKnown RBP7.73□□□□□ -1.17
PCDH18-201ENST00000344876 AKNAQ7Z591 1439 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 LARP1BQ659C4 914 aaKnown RBP7.72□□□□□ -1.17
PCDH18-201ENST00000344876 CABP2Q9NPB3 220 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 CCDC144AA2RUR9 1427 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 GTPBP4Q9BZE4 634 aaKnown RBP7.72□□□□□ -1.17
PCDH18-201ENST00000344876 ROCK1Q13464 1354 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 NINLQ9Y2I6 1382 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 PSME1Q06323 249 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 ABCC8Q09428 1581 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
PCDH18-201ENST00000344876 FAM160A1Q05DH4 1040 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 MICALCLQ6ZW33 695 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 FERMT3Q86UX7 667 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 ZNF396Q96N95 335 aaPredicted RBP7.72□□□□□ -1.17
PCDH18-201ENST00000344876 SLC26A8Q96RN1 970 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 KIF7Q2M1P5 1343 aa7.72□□□□□ -1.17
PCDH18-201ENST00000344876 ERLIN1O75477 346 aa7.71□□□□□ -1.17
PCDH18-201ENST00000344876 EIF3JO75822 258 aaKnown RBP7.71□□□□□ -1.17
PCDH18-201ENST00000344876 TCP11L2Q8N4U5 519 aa7.71□□□□□ -1.17
PCDH18-201ENST00000344876 K7ELQ4 463 aaPredicted RBP7.71□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC175P0C221 793 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 TXLNAP40222 546 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 RABEP1Q15276 862 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 TRMT1Q9NXH9 659 aaKnown RBP7.71□□□□□ -1.18
PCDH18-201ENST00000344876 MTHFSP49914 203 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 SART3Q15020 963 aaKnown RBP7.71□□□□□ -1.18
PCDH18-201ENST00000344876 UBXN4Q92575 508 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 UIMC1Q96RL1 719 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 BACH2Q9BYV9 841 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 FHOD3Q2V2M9 1422 aa7.71□□□□□ -1.18
PCDH18-201ENST00000344876 MCM4P33991 863 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 TMCO4Q5TGY1 634 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 SPATA32Q96LK8 384 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 NLRP2Q9NX02 1062 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 GTF2F1P35269 517 aaKnown RBP eCLIP7.7□□□□□ -1.18
PCDH18-201ENST00000344876 PPP4R3BQ5MIZ7 849 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 CYP46A1Q9Y6A2 500 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 TMCO3Q6UWJ1 677 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 PDCP20941 246 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 SMAP1Q8IYB5 467 aaPredicted RBP7.7□□□□□ -1.18
PCDH18-201ENST00000344876 LARP6Q9BRS8 491 aaKnown RBP7.7□□□□□ -1.18
PCDH18-201ENST00000344876 KRT85P78386 507 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 CFAP100Q494V2 611 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 RNF187Q5TA31 235 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms