RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 TMCO5BA8MYB1 307 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 PRIMPOLQ96LW4 560 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 ANKS4BQ8N8V4 417 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 BBXQ8WY36 941 aaPredicted RBP9.79□□□□□ -0.84
MCPH1-201ENST00000344683 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
MCPH1-201ENST00000344683 ZMYND15Q9H091 742 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 NUP155O75694 1391 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 SPA17Q15506 151 aa9.78□□□□□ -0.84
MCPH1-201ENST00000344683 NUP62CLQ9H1M0 184 aa9.78□□□□□ -0.84
MCPH1-201ENST00000344683 PAIP2Q9BPZ3 127 aaKnown RBP9.78□□□□□ -0.84
MCPH1-201ENST00000344683 ME1P48163 572 aa9.78□□□□□ -0.84
MCPH1-201ENST00000344683 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
MCPH1-201ENST00000344683 KIF3CO14782 793 aa9.78□□□□□ -0.84
MCPH1-201ENST00000344683 TDO2P48775 406 aa9.78□□□□□ -0.84
MCPH1-201ENST00000344683 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
MCPH1-201ENST00000344683 SFPQP23246 707 aaKnown RBP eCLIP9.77□□□□□ -0.84
MCPH1-201ENST00000344683 LNPKQ9C0E8 428 aa9.77□□□□□ -0.84
MCPH1-201ENST00000344683 CDKL5O76039 1030 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 MAP3K11Q16584 847 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 NSRP1Q9H0G5 558 aaKnown RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 PRKRIP1Q9H875 184 aaPredicted RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 NEK4P51957 841 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC113Q9H0I3 377 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 TTC5Q8N0Z6 440 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 RUNDC1Q96C34 613 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 RBM28Q9NW13 759 aaKnown RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 HMGB1P09429 215 aaKnown RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 NAP1L3Q99457 506 aaPredicted RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 GSDMDP57764 484 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 ANAPC15P60006 121 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 TUBB4BP68371 445 aa9.77□□□□□ -0.85
MCPH1-201ENST00000344683 TTC31Q49AM3 519 aaPredicted RBP9.77□□□□□ -0.85
MCPH1-201ENST00000344683 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
MCPH1-201ENST00000344683 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
MCPH1-201ENST00000344683 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 KRT222Q8N1A0 295 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 NOL3O60936 208 aaKnown RBP9.76□□□□□ -0.85
MCPH1-201ENST00000344683 ZWINTO95229 277 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 TEFQ10587 303 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 CEP131Q9UPN4 1083 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 TRIM22Q8IYM9 498 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 CYP46A1Q9Y6A2 500 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 TNNT1P13805 278 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 VPS36Q86VN1 386 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 PAFAH1B1P43034 410 aa9.76□□□□□ -0.85
MCPH1-201ENST00000344683 NOL7Q9UMY1 257 aaKnown RBP9.76□□□□□ -0.85
MCPH1-201ENST00000344683 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 SPATA32Q96LK8 384 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 PANK3Q9H999 370 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 EVC2Q86UK5 1308 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC183Q5T5S1 534 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 SREK1Q8WXA9 508 aaKnown RBP9.75□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC18Q5T9S5 1454 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 FGFR1OPO95684 399 aaKnown RBP9.75□□□□□ -0.85
MCPH1-201ENST00000344683 GOPCQ9HD26 462 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 RSRC1Q96IZ7 334 aaKnown RBP9.75□□□□□ -0.85
MCPH1-201ENST00000344683 ZHX1Q9UKY1 873 aaPredicted RBP9.75□□□□□ -0.85
MCPH1-201ENST00000344683 TBC1D2BQ9UPU7 963 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 FERP16591 822 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 MCM4P33991 863 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 LMAN1P49257 510 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 COG3Q96JB2 828 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 CEP83Q9Y592 693 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 PPP1R12BO60237 982 aaPredicted RBP9.75□□□□□ -0.85
MCPH1-201ENST00000344683 CEP112Q8N8E3 955 aa9.75□□□□□ -0.85
MCPH1-201ENST00000344683 BMP2KQ9NSY1 1161 aaPredicted RBP9.75□□□□□ -0.85
MCPH1-201ENST00000344683 USO1O60763 962 aaKnown RBP9.74□□□□□ -0.85
MCPH1-201ENST00000344683 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
MCPH1-201ENST00000344683 EIF5P55010 431 aaKnown RBP9.74□□□□□ -0.85
MCPH1-201ENST00000344683 GNAI1P63096 354 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 SARNPP82979 210 aaKnown RBP9.74□□□□□ -0.85
MCPH1-201ENST00000344683 HOOK3Q86VS8 718 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 HSF2BPO75031 334 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 USP47Q96K76 1375 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 CTAGE5O15320 804 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC57Q2TAC2 916 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC144AA2RUR9 1427 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 NEBLO76041 1014 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 UBE4AQ14139 1066 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 CFAP100Q494V2 611 aa9.74□□□□□ -0.85
MCPH1-201ENST00000344683 NGDNQ8NEJ9 315 aaKnown RBP9.74□□□□□ -0.85
MCPH1-201ENST00000344683 ZSCAN31Q96LW9 406 aaPredicted RBP9.73□□□□□ -0.85
MCPH1-201ENST00000344683 ALS2CR12Q96Q35 445 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 FKBP5Q13451 457 aaPredicted RBP9.73□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC6Q16204 474 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 STMN4Q9H169 189 aaPredicted RBP9.73□□□□□ -0.85
MCPH1-201ENST00000344683 GSTTP1A0A1W2PQM5 241 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 KIF5BP33176 963 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC97Q96F63 343 aaPredicted RBP9.73□□□□□ -0.85
MCPH1-201ENST00000344683 ANO10Q9NW15 660 aa9.73□□□□□ -0.85
MCPH1-201ENST00000344683 WASF1Q92558 559 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 SMARCA2P51531 1590 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms