RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 NUP188Q5SRE5 1749 aa28.62■■■□□ 2.17
KCNQ2-201ENST00000344425 CPSF1Q10570 1443 aaKnown RBP28.62■■■□□ 2.17
KCNQ2-201ENST00000344425 PLSCR1O15162 318 aa28.6■■■□□ 2.17
KCNQ2-201ENST00000344425 COL18A1P39060 1754 aa28.59■■■□□ 2.17
KCNQ2-201ENST00000344425 SOX12O15370 315 aa28.59■■■□□ 2.17
KCNQ2-201ENST00000344425 CSB-PGBD3P0DP91 1061 aa28.59■■■□□ 2.17
KCNQ2-201ENST00000344425 BCL11BQ9C0K0 894 aaPredicted RBP28.58■■■□□ 2.17
KCNQ2-201ENST00000344425 KTN1Q86UP2 1357 aaKnown RBP28.57■■■□□ 2.16
KCNQ2-201ENST00000344425 PEAK1Q9H792 1746 aa28.57■■■□□ 2.16
KCNQ2-201ENST00000344425 CARD10Q9BWT7 1032 aa28.57■■■□□ 2.16
KCNQ2-201ENST00000344425 SPON1Q9HCB6 807 aa28.57■■■□□ 2.16
KCNQ2-201ENST00000344425 LRRC37A3O60309 1634 aa28.57■■■□□ 2.16
KCNQ2-201ENST00000344425 MARCH10Q8NA82 808 aaPredicted RBP28.54■■■□□ 2.16
KCNQ2-201ENST00000344425 AKAP12Q02952 1782 aa28.54■■■□□ 2.16
KCNQ2-201ENST00000344425 KCNQ2O43526 872 aa28.53■■■□□ 2.16
KCNQ2-201ENST00000344425 PPP1R1BQ9UD71 204 aaPredicted RBP28.53■■■□□ 2.16
KCNQ2-201ENST00000344425 BCL9O00512 1426 aa28.52■■■□□ 2.16
KCNQ2-201ENST00000344425 EXOC5O00471 708 aa28.52■■■□□ 2.16
KCNQ2-201ENST00000344425 SBNO2Q9Y2G9 1366 aa28.51■■■□□ 2.15
KCNQ2-201ENST00000344425 RGPD3A6NKT7 1758 aaPredicted RBP28.5■■■□□ 2.15
KCNQ2-201ENST00000344425 RGPD4Q7Z3J3 1758 aa28.5■■■□□ 2.15
KCNQ2-201ENST00000344425 CCDC7Q96M83 1385 aa28.5■■■□□ 2.15
KCNQ2-201ENST00000344425 SBF2Q86WG5 1849 aa28.5■■■□□ 2.15
KCNQ2-201ENST00000344425 PTF1AQ7RTS3 328 aa28.48■■■□□ 2.15
KCNQ2-201ENST00000344425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.48■■■□□ 2.15
KCNQ2-201ENST00000344425 CARD11Q9BXL7 1154 aa28.48■■■□□ 2.15
KCNQ2-201ENST00000344425 NFAT5O94916 1531 aa28.48■■■□□ 2.15
KCNQ2-201ENST00000344425 WNK3Q9BYP7 1800 aa28.47■■■□□ 2.15
KCNQ2-201ENST00000344425 ABCC6O95255 1503 aa28.46■■■□□ 2.15
KCNQ2-201ENST00000344425 USP31Q70CQ4 1352 aa28.46■■■□□ 2.15
KCNQ2-201ENST00000344425 RGPD5Q99666 1765 aa28.45■■■□□ 2.15
KCNQ2-201ENST00000344425 DCAF8L1A6NGE4 600 aa28.44■■■□□ 2.14
KCNQ2-201ENST00000344425 TMC1Q8TDI8 760 aa28.44■■■□□ 2.14
KCNQ2-201ENST00000344425 ANO8Q9HCE9 1232 aaPredicted RBP28.44■■■□□ 2.14
KCNQ2-201ENST00000344425 HDGFL2Q7Z4V5 671 aaPredicted RBP28.43■■■□□ 2.14
KCNQ2-201ENST00000344425 PROM2Q8N271 834 aa28.43■■■□□ 2.14
KCNQ2-201ENST00000344425 MON2Q7Z3U7 1717 aa28.42■■■□□ 2.14
KCNQ2-201ENST00000344425 NINLQ9Y2I6 1382 aa28.42■■■□□ 2.14
KCNQ2-201ENST00000344425 NME9Q86XW9 330 aa28.41■■■□□ 2.14
KCNQ2-201ENST00000344425 TXNRD1Q16881 649 aa28.4■■■□□ 2.14
KCNQ2-201ENST00000344425 NLRP2Q9NX02 1062 aa28.4■■■□□ 2.14
KCNQ2-201ENST00000344425 ERBB3P21860 1342 aa28.39■■■□□ 2.14
KCNQ2-201ENST00000344425 STK32BQ9NY57 414 aa28.39■■■□□ 2.14
KCNQ2-201ENST00000344425 TNS2Q63HR2 1409 aa28.39■■■□□ 2.13
KCNQ2-201ENST00000344425 SLC12A5Q9H2X9 1139 aa28.38■■■□□ 2.13
KCNQ2-201ENST00000344425 TERF2IPQ9NYB0 399 aa28.38■■■□□ 2.13
KCNQ2-201ENST00000344425 CD163L1Q9NR16 1453 aa28.38■■■□□ 2.13
KCNQ2-201ENST00000344425 YY1P25490 414 aa28.36■■■□□ 2.13
KCNQ2-201ENST00000344425 IL2RBP14784 551 aa28.35■■■□□ 2.13
KCNQ2-201ENST00000344425 PUS7Q96PZ0 661 aaKnown RBP28.35■■■□□ 2.13
KCNQ2-201ENST00000344425 EDC4Q6P2E9 1401 aaKnown RBP28.35■■■□□ 2.13
KCNQ2-201ENST00000344425 TONSLQ96HA7 1378 aa28.34■■■□□ 2.13
KCNQ2-201ENST00000344425 USP54Q70EL1 1684 aa28.34■■■□□ 2.13
KCNQ2-201ENST00000344425 SLC15A2Q16348 729 aa28.34■■■□□ 2.13
KCNQ2-201ENST00000344425 ANKRD24Q8TF21 1146 aa28.34■■■□□ 2.13
KCNQ2-201ENST00000344425 ZBTB7AO95365 584 aa28.33■■■□□ 2.13
KCNQ2-201ENST00000344425 PDGFDQ9GZP0 370 aaPredicted RBP28.33■■■□□ 2.13
KCNQ2-201ENST00000344425 CASZ1Q86V15 1759 aa28.32■■■□□ 2.12
KCNQ2-201ENST00000344425 ACSBG1Q96GR2 724 aa28.31■■■□□ 2.12
KCNQ2-201ENST00000344425 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
KCNQ2-201ENST00000344425 ATF5Q9Y2D1 282 aaPredicted RBP28.28■■■□□ 2.12
KCNQ2-201ENST00000344425 LTN1O94822 1766 aa28.27■■■□□ 2.12
KCNQ2-201ENST00000344425 SLC24A1O60721 1099 aa28.26■■■□□ 2.12
KCNQ2-201ENST00000344425 NHSQ6T4R5 1651 aa28.26■■■□□ 2.11
KCNQ2-201ENST00000344425 PTGER2P43116 358 aa28.26■■■□□ 2.11
KCNQ2-201ENST00000344425 IP6K1Q92551 441 aa28.26■■■□□ 2.11
KCNQ2-201ENST00000344425 MTFR1LQ9H019 292 aa28.25■■■□□ 2.11
KCNQ2-201ENST00000344425 COG3Q96JB2 828 aa28.21■■■□□ 2.11
KCNQ2-201ENST00000344425 ST20-MTHFSA0A0A6YYL1 179 aa28.19■■■□□ 2.1
KCNQ2-201ENST00000344425 LTV1Q96GA3 475 aaPredicted RBP28.19■■■□□ 2.1
KCNQ2-201ENST00000344425 TESK2Q96S53 571 aa28.19■■■□□ 2.1
KCNQ2-201ENST00000344425 DDX54Q8TDD1 881 aaKnown RBP28.18■■■□□ 2.1
KCNQ2-201ENST00000344425 FHDC1Q9C0D6 1143 aaPredicted RBP28.17■■■□□ 2.1
KCNQ2-201ENST00000344425 MYOM1P52179 1685 aa28.16■■■□□ 2.1
KCNQ2-201ENST00000344425 AMPHP49418 695 aa28.16■■■□□ 2.1
KCNQ2-201ENST00000344425 SYT17Q9BSW7 474 aa28.16■■■□□ 2.1
KCNQ2-201ENST00000344425 SGIP1Q9BQI5 828 aa28.15■■■□□ 2.1
KCNQ2-201ENST00000344425 KAT6BQ8WYB5 2073 aa28.14■■■□□ 2.1
KCNQ2-201ENST00000344425 BTAF1O14981 1849 aa28.14■■■□□ 2.1
KCNQ2-201ENST00000344425 HOXC9P31274 260 aa28.14■■■□□ 2.1
KCNQ2-201ENST00000344425 MAP3K19Q56UN5 1328 aa28.14■■■□□ 2.09
KCNQ2-201ENST00000344425 SLC27A3Q5K4L6 730 aa28.13■■■□□ 2.09
KCNQ2-201ENST00000344425 LRRC4BQ9NT99 713 aa28.13■■■□□ 2.09
KCNQ2-201ENST00000344425 FAM208AQ9UK61 1670 aaKnown RBP28.13■■■□□ 2.09
KCNQ2-201ENST00000344425 ARXQ96QS3 562 aa28.12■■■□□ 2.09
KCNQ2-201ENST00000344425 PAPPAQ13219 1627 aa28.12■■■□□ 2.09
KCNQ2-201ENST00000344425 ZNF827Q17R98 1081 aa28.11■■■□□ 2.09
KCNQ2-201ENST00000344425 ANKRD36BQ8N2N9 1353 aa28.09■■■□□ 2.09
KCNQ2-201ENST00000344425 SYTL4Q96C24 671 aaPredicted RBP28.09■■■□□ 2.09
KCNQ2-201ENST00000344425 ZCRB1Q8TBF4 217 aaKnown RBP28.08■■■□□ 2.09
KCNQ2-201ENST00000344425 AKT1S1Q96B36 256 aa28.08■■■□□ 2.09
KCNQ2-201ENST00000344425 FBLN1P23142 703 aa28.07■■■□□ 2.08
KCNQ2-201ENST00000344425 TMF1P82094 1093 aa28.07■■■□□ 2.08
KCNQ2-201ENST00000344425 SLC16A10Q8TF71 515 aa28.07■■■□□ 2.08
KCNQ2-201ENST00000344425 PRIM1P49642 420 aaKnown RBP28.06■■■□□ 2.08
KCNQ2-201ENST00000344425 RTL1A6NKG5 1358 aa28.05■■■□□ 2.08
KCNQ2-201ENST00000344425 MAP3K5Q99683 1374 aa28.03■■■□□ 2.08
KCNQ2-201ENST00000344425 FYB1O15117 783 aa28.02■■■□□ 2.08
KCNQ2-201ENST00000344425 RRS1Q15050 365 aaKnown RBP28.02■■■□□ 2.08
KCNQ2-201ENST00000344425 TFCP2L1Q9NZI6 479 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms