RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
CLDN18-202ENST00000343735 SOX12O15370 315 aa12.85□□□□□ -0.35
CLDN18-202ENST00000343735 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
CLDN18-202ENST00000343735 NEFMP07197 916 aa12.85□□□□□ -0.35
CLDN18-202ENST00000343735 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
CLDN18-202ENST00000343735 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
CLDN18-202ENST00000343735 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLDN18-202ENST00000343735 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
CLDN18-202ENST00000343735 UBAP1LF5GYI3 381 aa12.84□□□□□ -0.35
CLDN18-202ENST00000343735 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
CLDN18-202ENST00000343735 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
CLDN18-202ENST00000343735 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
CLDN18-202ENST00000343735 MED1Q15648 1581 aaPredicted RBP12.83□□□□□ -0.35
CLDN18-202ENST00000343735 FBLN1P23142 703 aa12.83□□□□□ -0.36
CLDN18-202ENST00000343735 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
CLDN18-202ENST00000343735 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
CLDN18-202ENST00000343735 FCHSD2O94868 740 aa12.83□□□□□ -0.36
CLDN18-202ENST00000343735 IP6K1Q92551 441 aa12.83□□□□□ -0.36
CLDN18-202ENST00000343735 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
CLDN18-202ENST00000343735 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
CLDN18-202ENST00000343735 NFAT5O94916 1531 aa12.83□□□□□ -0.36
CLDN18-202ENST00000343735 IL13P35225 146 aa12.82□□□□□ -0.36
CLDN18-202ENST00000343735 HOXC9P31274 260 aa12.82□□□□□ -0.36
CLDN18-202ENST00000343735 ARHGEF25Q86VW2 580 aa12.82□□□□□ -0.36
CLDN18-202ENST00000343735 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
CLDN18-202ENST00000343735 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
CLDN18-202ENST00000343735 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
CLDN18-202ENST00000343735 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
CLDN18-202ENST00000343735 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
CLDN18-202ENST00000343735 ABCC6O95255 1503 aa12.8□□□□□ -0.36
CLDN18-202ENST00000343735 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
CLDN18-202ENST00000343735 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
CLDN18-202ENST00000343735 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
CLDN18-202ENST00000343735 CPDO75976 1380 aa12.8□□□□□ -0.36
CLDN18-202ENST00000343735 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
CLDN18-202ENST00000343735 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
CLDN18-202ENST00000343735 PEAK1Q9H792 1746 aa12.78□□□□□ -0.36
CLDN18-202ENST00000343735 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.36
CLDN18-202ENST00000343735 NBR1Q14596 966 aa12.77□□□□□ -0.36
CLDN18-202ENST00000343735 LTN1O94822 1766 aa12.77□□□□□ -0.37
CLDN18-202ENST00000343735 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
CLDN18-202ENST00000343735 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
CLDN18-202ENST00000343735 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
CLDN18-202ENST00000343735 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
CLDN18-202ENST00000343735 CABLES1Q8TDN4 633 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 APAF1O14727 1248 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 IGSF1Q8N6C5 1336 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
CLDN18-202ENST00000343735 COL22A1Q8NFW1 1626 aaPredicted RBP12.74□□□□□ -0.37
CLDN18-202ENST00000343735 CCDC27Q2M243 656 aa12.74□□□□□ -0.37
CLDN18-202ENST00000343735 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
CLDN18-202ENST00000343735 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
CLDN18-202ENST00000343735 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
CLDN18-202ENST00000343735 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
CLDN18-202ENST00000343735 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
CLDN18-202ENST00000343735 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
CLDN18-202ENST00000343735 HMOX1P09601 288 aa12.73□□□□□ -0.37
CLDN18-202ENST00000343735 EYA1Q99502 592 aa12.73□□□□□ -0.37
CLDN18-202ENST00000343735 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
CLDN18-202ENST00000343735 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
CLDN18-202ENST00000343735 LTV1Q96GA3 475 aaPredicted RBP12.73□□□□□ -0.37
CLDN18-202ENST00000343735 KDRP35968 1356 aa12.72□□□□□ -0.37
CLDN18-202ENST00000343735 RGPD1P0DJD0 1748 aa12.72□□□□□ -0.37
CLDN18-202ENST00000343735 JCADQ9P266 1359 aa12.71□□□□□ -0.37
CLDN18-202ENST00000343735 ERBB3P21860 1342 aa12.71□□□□□ -0.37
CLDN18-202ENST00000343735 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
CLDN18-202ENST00000343735 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.38
CLDN18-202ENST00000343735 PLEKHG2Q9H7P9 1386 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
CLDN18-202ENST00000343735 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
CLDN18-202ENST00000343735 RIPK4P57078 832 aa12.69□□□□□ -0.38
CLDN18-202ENST00000343735 FAM208AQ9UK61 1670 aaKnown RBP12.69□□□□□ -0.38
CLDN18-202ENST00000343735 CHRNA2Q15822 529 aa12.69□□□□□ -0.38
CLDN18-202ENST00000343735 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
CLDN18-202ENST00000343735 COL18A1P39060 1754 aa12.69□□□□□ -0.38
CLDN18-202ENST00000343735 EVA1CP58658 441 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 NBPF6Q5VWK0 638 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 NBPF4Q96M43 638 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 ZNF521Q96K83 1311 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
CLDN18-202ENST00000343735 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
CLDN18-202ENST00000343735 E9PSI1 815 aa12.67□□□□□ -0.38
CLDN18-202ENST00000343735 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
CLDN18-202ENST00000343735 NCAPD2Q15021 1401 aa12.67□□□□□ -0.38
CLDN18-202ENST00000343735 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
CLDN18-202ENST00000343735 COL14A1Q05707 1796 aaKnown RBP12.67□□□□□ -0.38
CLDN18-202ENST00000343735 FAM83GA6ND36 823 aa12.66□□□□□ -0.38
CLDN18-202ENST00000343735 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
CLDN18-202ENST00000343735 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms