RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 IL13P35225 146 aa25.74■■□□□ 1.71
GTF3C5-201ENST00000342018 EIF4A2Q14240 407 aaKnown RBP25.74■■□□□ 1.71
GTF3C5-201ENST00000342018 LTV1Q96GA3 475 aaPredicted RBP25.73■■□□□ 1.71
GTF3C5-201ENST00000342018 CRYBG1Q9Y4K1 1723 aa25.73■■□□□ 1.71
GTF3C5-201ENST00000342018 COL16A1Q07092 1604 aaPredicted RBP25.72■■□□□ 1.71
GTF3C5-201ENST00000342018 IP6K1Q92551 441 aa25.72■■□□□ 1.71
GTF3C5-201ENST00000342018 KIF24Q5T7B8 1368 aa25.71■■□□□ 1.71
GTF3C5-201ENST00000342018 RTL1A6NKG5 1358 aa25.7■■□□□ 1.71
GTF3C5-201ENST00000342018 CHRNA2Q15822 529 aa25.7■■□□□ 1.7
GTF3C5-201ENST00000342018 KIAA0232Q92628 1395 aa25.69■■□□□ 1.7
GTF3C5-201ENST00000342018 HMOX1P09601 288 aa25.69■■□□□ 1.7
GTF3C5-201ENST00000342018 BLMP54132 1417 aaPredicted RBP25.68■■□□□ 1.7
GTF3C5-201ENST00000342018 SALL2Q9Y467 1007 aaPredicted RBP25.68■■□□□ 1.7
GTF3C5-201ENST00000342018 ABCA3Q99758 1704 aa25.66■■□□□ 1.7
GTF3C5-201ENST00000342018 AXIN2Q9Y2T1 843 aa25.66■■□□□ 1.7
GTF3C5-201ENST00000342018 PRDM11Q9NQV5 511 aa25.65■■□□□ 1.7
GTF3C5-201ENST00000342018 CPDO75976 1380 aa25.63■■□□□ 1.69
GTF3C5-201ENST00000342018 SULT6B1Q6IMI4 303 aa25.62■■□□□ 1.69
GTF3C5-201ENST00000342018 RUNDC1Q96C34 613 aa25.62■■□□□ 1.69
GTF3C5-201ENST00000342018 AEBP1Q8IUX7 1158 aa25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 ANKRD24Q8TF21 1146 aa25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 EYA1Q99502 592 aa25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 NUTM2BA6NNL0 878 aaPredicted RBP25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 NUTM2EB1AL46 878 aaPredicted RBP25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 APAF1O14727 1248 aa25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 PRKAR2BP31323 418 aa25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 NUTM2AQ8IVF1 878 aaPredicted RBP25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
GTF3C5-201ENST00000342018 COL22A1Q8NFW1 1626 aaPredicted RBP25.6■■□□□ 1.69
GTF3C5-201ENST00000342018 FCHSD2O94868 740 aa25.6■■□□□ 1.69
GTF3C5-201ENST00000342018 RSPH6AQ9H0K4 717 aa25.6■■□□□ 1.69
GTF3C5-201ENST00000342018 HSPA1LP34931 641 aa25.59■■□□□ 1.69
GTF3C5-201ENST00000342018 USHBP1Q8N6Y0 703 aa25.58■■□□□ 1.69
GTF3C5-201ENST00000342018 MAPK8IP3Q9UPT6 1336 aa25.58■■□□□ 1.68
GTF3C5-201ENST00000342018 PLEKHF1Q96S99 279 aa25.57■■□□□ 1.68
GTF3C5-201ENST00000342018 PNNQ9H307 717 aaKnown RBP25.57■■□□□ 1.68
GTF3C5-201ENST00000342018 COL18A1P39060 1754 aa25.57■■□□□ 1.68
GTF3C5-201ENST00000342018 ADAMTS2O95450 1211 aa25.57■■□□□ 1.68
GTF3C5-201ENST00000342018 NEUROD2Q15784 382 aa25.57■■□□□ 1.68
GTF3C5-201ENST00000342018 RRP7AQ9Y3A4 280 aaKnown RBP25.57■■□□□ 1.68
GTF3C5-201ENST00000342018 RGPD1P0DJD0 1748 aa25.56■■□□□ 1.68
GTF3C5-201ENST00000342018 FAM83GA6ND36 823 aa25.56■■□□□ 1.68
GTF3C5-201ENST00000342018 CSB-PGBD3P0DP91 1061 aa25.56■■□□□ 1.68
GTF3C5-201ENST00000342018 TCP11L2Q8N4U5 519 aa25.56■■□□□ 1.68
GTF3C5-201ENST00000342018 ZBED9Q6R2W3 1325 aa25.56■■□□□ 1.68
GTF3C5-201ENST00000342018 IGSF1Q8N6C5 1336 aa25.56■■□□□ 1.68
GTF3C5-201ENST00000342018 NEFMP07197 916 aa25.55■■□□□ 1.68
GTF3C5-201ENST00000342018 NBPF6Q5VWK0 638 aa25.55■■□□□ 1.68
GTF3C5-201ENST00000342018 NBPF4Q96M43 638 aa25.55■■□□□ 1.68
GTF3C5-201ENST00000342018 ERBB3P21860 1342 aa25.55■■□□□ 1.68
GTF3C5-201ENST00000342018 JCADQ9P266 1359 aa25.54■■□□□ 1.68
GTF3C5-201ENST00000342018 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
GTF3C5-201ENST00000342018 RGPD2P0DJD1 1756 aa25.53■■□□□ 1.68
GTF3C5-201ENST00000342018 PHACTR3Q96KR7 559 aa25.53■■□□□ 1.68
GTF3C5-201ENST00000342018 NLRP2Q9NX02 1062 aa25.51■■□□□ 1.67
GTF3C5-201ENST00000342018 ABCC6O95255 1503 aa25.51■■□□□ 1.67
GTF3C5-201ENST00000342018 CAMTA1Q9Y6Y1 1673 aa25.51■■□□□ 1.67
GTF3C5-201ENST00000342018 STRN4Q9NRL3 753 aa25.51■■□□□ 1.67
GTF3C5-201ENST00000342018 EVA1CP58658 441 aa25.49■■□□□ 1.67
GTF3C5-201ENST00000342018 BTG4Q9NY30 223 aa25.49■■□□□ 1.67
GTF3C5-201ENST00000342018 LMO7Q8WWI1 1683 aa25.49■■□□□ 1.67
GTF3C5-201ENST00000342018 KDRP35968 1356 aa25.48■■□□□ 1.67
GTF3C5-201ENST00000342018 TMPOP42166 694 aaKnown RBP25.47■■□□□ 1.67
GTF3C5-201ENST00000342018 COL5A2P05997 1499 aaPredicted RBP25.46■■□□□ 1.67
GTF3C5-201ENST00000342018 COL14A1Q05707 1796 aaKnown RBP25.45■■□□□ 1.66
GTF3C5-201ENST00000342018 RIPK4P57078 832 aa25.45■■□□□ 1.66
GTF3C5-201ENST00000342018 TOM1L2Q6ZVM7 507 aa25.45■■□□□ 1.66
GTF3C5-201ENST00000342018 WDR17Q8IZU2 1322 aa25.44■■□□□ 1.66
GTF3C5-201ENST00000342018 NFE2L2Q16236 605 aa25.43■■□□□ 1.66
GTF3C5-201ENST00000342018 LARP1Q6PKG0 1096 aaKnown RBP25.42■■□□□ 1.66
GTF3C5-201ENST00000342018 SPATA31A6Q5VVP1 1343 aa25.42■■□□□ 1.66
GTF3C5-201ENST00000342018 WWC1Q8IX03 1113 aa25.4■■□□□ 1.66
GTF3C5-201ENST00000342018 C8orf37Q96NL8 207 aa25.4■■□□□ 1.66
GTF3C5-201ENST00000342018 FAM208AQ9UK61 1670 aaKnown RBP25.4■■□□□ 1.66
GTF3C5-201ENST00000342018 NGEFQ8N5V2 710 aa25.39■■□□□ 1.66
GTF3C5-201ENST00000342018 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.65
GTF3C5-201ENST00000342018 USP35Q9P2H5 1018 aa25.39■■□□□ 1.65
GTF3C5-201ENST00000342018 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
GTF3C5-201ENST00000342018 PLCH1Q4KWH8 1693 aa25.38■■□□□ 1.65
GTF3C5-201ENST00000342018 NCAPD2Q15021 1401 aa25.38■■□□□ 1.65
GTF3C5-201ENST00000342018 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
GTF3C5-201ENST00000342018 ZNF521Q96K83 1311 aa25.37■■□□□ 1.65
GTF3C5-201ENST00000342018 LRP6O75581 1613 aa25.37■■□□□ 1.65
GTF3C5-201ENST00000342018 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
GTF3C5-201ENST00000342018 NGLY1Q96IV0 654 aa25.37■■□□□ 1.65
GTF3C5-201ENST00000342018 MEX3CQ5U5Q3 659 aaKnown RBP25.36■■□□□ 1.65
GTF3C5-201ENST00000342018 CCDC27Q2M243 656 aa25.35■■□□□ 1.65
GTF3C5-201ENST00000342018 GOLGA2Q08379 1002 aa25.35■■□□□ 1.65
GTF3C5-201ENST00000342018 CARD10Q9BWT7 1032 aa25.35■■□□□ 1.65
GTF3C5-201ENST00000342018 GAS2L2Q8NHY3 880 aa25.34■■□□□ 1.65
GTF3C5-201ENST00000342018 TATP17735 454 aaPredicted RBP25.33■■□□□ 1.65
GTF3C5-201ENST00000342018 PHF23Q9BUL5 403 aaPredicted RBP25.33■■□□□ 1.65
GTF3C5-201ENST00000342018 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.65
GTF3C5-201ENST00000342018 CRB1P82279 1406 aa25.33■■□□□ 1.65
GTF3C5-201ENST00000342018 PDE3BQ13370 1112 aa25.33■■□□□ 1.65
GTF3C5-201ENST00000342018 DCTN1Q14203 1278 aa25.32■■□□□ 1.64
GTF3C5-201ENST00000342018 PLEKHO1Q53GL0 409 aaPredicted RBP25.32■■□□□ 1.64
GTF3C5-201ENST00000342018 THUMPD2Q9BTF0 503 aaKnown RBP25.32■■□□□ 1.64
GTF3C5-201ENST00000342018 NCBP3Q53F19 620 aaKnown RBP25.31■■□□□ 1.64
GTF3C5-201ENST00000342018 MEGF6O75095 1541 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms