RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 NINLQ9Y2I6 1382 aa28.23■■■□□ 2.11
SYNE2-201ENST00000341472 WDR17Q8IZU2 1322 aa28.22■■■□□ 2.11
SYNE2-201ENST00000341472 EDC4Q6P2E9 1401 aaKnown RBP28.22■■■□□ 2.11
SYNE2-201ENST00000341472 PIK3C2AO00443 1686 aa28.22■■■□□ 2.11
SYNE2-201ENST00000341472 A0A1W2PP64 1363 aa28.22■■■□□ 2.11
SYNE2-201ENST00000341472 CDCA8Q53HL2 280 aa28.21■■■□□ 2.11
SYNE2-201ENST00000341472 LMO7Q8WWI1 1683 aa28.21■■■□□ 2.11
SYNE2-201ENST00000341472 TRIM37O94972 964 aa28.19■■■□□ 2.1
SYNE2-201ENST00000341472 CARD10Q9BWT7 1032 aa28.18■■■□□ 2.1
SYNE2-201ENST00000341472 THSD7AQ9UPZ6 1657 aa28.18■■■□□ 2.1
SYNE2-201ENST00000341472 EN1Q05925 392 aaPredicted RBP28.17■■■□□ 2.1
SYNE2-201ENST00000341472 AKAP12Q02952 1782 aa28.16■■■□□ 2.1
SYNE2-201ENST00000341472 CDCA7Q9BWT1 371 aaPredicted RBP28.16■■■□□ 2.1
SYNE2-201ENST00000341472 DDB1Q16531 1140 aa28.15■■■□□ 2.1
SYNE2-201ENST00000341472 C11orf95C9JLR9 678 aaPredicted RBP28.14■■■□□ 2.1
SYNE2-201ENST00000341472 COG3Q96JB2 828 aa28.14■■■□□ 2.1
SYNE2-201ENST00000341472 APBA3O96018 575 aa28.13■■■□□ 2.09
SYNE2-201ENST00000341472 NFAT5O94916 1531 aa28.11■■■□□ 2.09
SYNE2-201ENST00000341472 ANKRD36BQ8N2N9 1353 aa28.11■■■□□ 2.09
SYNE2-201ENST00000341472 NLRP2Q9NX02 1062 aa28.09■■■□□ 2.09
SYNE2-201ENST00000341472 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
SYNE2-201ENST00000341472 EXOC5O00471 708 aa28.08■■■□□ 2.09
SYNE2-201ENST00000341472 COL18A1P39060 1754 aa28.07■■■□□ 2.08
SYNE2-201ENST00000341472 EZH2Q15910 746 aaKnown RBP28.07■■■□□ 2.08
SYNE2-201ENST00000341472 ANKRD24Q8TF21 1146 aa28.07■■■□□ 2.08
SYNE2-201ENST00000341472 IP6K1Q92551 441 aa28.07■■■□□ 2.08
SYNE2-201ENST00000341472 CAMKK2Q96RR4 588 aa28.07■■■□□ 2.08
SYNE2-201ENST00000341472 FYB1O15117 783 aa28.06■■■□□ 2.08
SYNE2-201ENST00000341472 CCDC7Q96M83 1385 aa28.06■■■□□ 2.08
SYNE2-201ENST00000341472 OVOS2A0A0J9YW53 1432 aa28.05■■■□□ 2.08
SYNE2-201ENST00000341472 ERBB3P21860 1342 aa28.05■■■□□ 2.08
SYNE2-201ENST00000341472 OVOS2Q6IE36 1432 aa28.05■■■□□ 2.08
SYNE2-201ENST00000341472 MARCH10Q8NA82 808 aaPredicted RBP28.04■■■□□ 2.08
SYNE2-201ENST00000341472 DISP2A7MBM2 1401 aa28.03■■■□□ 2.08
SYNE2-201ENST00000341472 GGNBP2Q9H3C7 697 aa28.03■■■□□ 2.08
SYNE2-201ENST00000341472 FBLN1P23142 703 aa28.02■■■□□ 2.08
SYNE2-201ENST00000341472 AMPHP49418 695 aa28.02■■■□□ 2.08
SYNE2-201ENST00000341472 LTV1Q96GA3 475 aaPredicted RBP28.01■■■□□ 2.07
SYNE2-201ENST00000341472 PSDA5PKW4 1024 aaPredicted RBP28■■■□□ 2.07
SYNE2-201ENST00000341472 EIF4G2P78344 907 aaKnown RBP eCLIP28■■■□□ 2.07
SYNE2-201ENST00000341472 MAP3K19Q56UN5 1328 aa27.99■■■□□ 2.07
SYNE2-201ENST00000341472 ABCC6O95255 1503 aa27.99■■■□□ 2.07
SYNE2-201ENST00000341472 CARD14Q9BXL6 1004 aa27.99■■■□□ 2.07
SYNE2-201ENST00000341472 OVOS2A0A0G2JMS6 1433 aa27.99■■■□□ 2.07
SYNE2-201ENST00000341472 SRCAPQ6ZRS2 3230 aa27.98■■■□□ 2.07
SYNE2-201ENST00000341472 PARD3Q8TEW0 1356 aa27.98■■■□□ 2.07
SYNE2-201ENST00000341472 IL2RBP14784 551 aa27.97■■■□□ 2.07
SYNE2-201ENST00000341472 POLR3GLQ9BT43 218 aa27.97■■■□□ 2.07
SYNE2-201ENST00000341472 BCL11BQ9C0K0 894 aaPredicted RBP27.97■■■□□ 2.07
SYNE2-201ENST00000341472 HOXC9P31274 260 aa27.96■■■□□ 2.07
SYNE2-201ENST00000341472 HSPA5P11021 654 aaKnown RBP27.95■■■□□ 2.06
SYNE2-201ENST00000341472 R3HDM1Q15032 1099 aaKnown RBP27.95■■■□□ 2.06
SYNE2-201ENST00000341472 RRS1Q15050 365 aaKnown RBP27.94■■■□□ 2.06
SYNE2-201ENST00000341472 RGPD1P0DJD0 1748 aa27.94■■■□□ 2.06
SYNE2-201ENST00000341472 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
SYNE2-201ENST00000341472 PARP4Q9UKK3 1724 aaKnown RBP27.92■■■□□ 2.06
SYNE2-201ENST00000341472 NBPF14Q5TI25 921 aa27.92■■■□□ 2.06
SYNE2-201ENST00000341472 PLSCR1O15162 318 aa27.91■■■□□ 2.06
SYNE2-201ENST00000341472 PTF1AQ7RTS3 328 aa27.91■■■□□ 2.06
SYNE2-201ENST00000341472 BCL9O00512 1426 aa27.9■■■□□ 2.06
SYNE2-201ENST00000341472 RGPD5Q99666 1765 aa27.87■■■□□ 2.05
SYNE2-201ENST00000341472 NSD3Q9BZ95 1437 aa27.86■■■□□ 2.05
SYNE2-201ENST00000341472 KCNQ2O43526 872 aa27.84■■■□□ 2.05
SYNE2-201ENST00000341472 DDX54Q8TDD1 881 aaKnown RBP27.84■■■□□ 2.05
SYNE2-201ENST00000341472 CGNL1Q0VF96 1302 aa27.84■■■□□ 2.05
SYNE2-201ENST00000341472 LRRC37A3O60309 1634 aa27.84■■■□□ 2.05
SYNE2-201ENST00000341472 TNS1Q9HBL0 1735 aaKnown RBP27.84■■■□□ 2.05
SYNE2-201ENST00000341472 TNS2Q63HR2 1409 aa27.84■■■□□ 2.05
SYNE2-201ENST00000341472 HSP90AB2PQ58FF8 381 aa27.83■■■□□ 2.05
SYNE2-201ENST00000341472 RTL1A6NKG5 1358 aa27.83■■■□□ 2.05
SYNE2-201ENST00000341472 NBPF6Q5VWK0 638 aa27.82■■■□□ 2.04
SYNE2-201ENST00000341472 ACSBG1Q96GR2 724 aa27.82■■■□□ 2.04
SYNE2-201ENST00000341472 NBPF4Q96M43 638 aa27.82■■■□□ 2.04
SYNE2-201ENST00000341472 PROM2Q8N271 834 aa27.8■■■□□ 2.04
SYNE2-201ENST00000341472 PANK3Q9H999 370 aa27.8■■■□□ 2.04
SYNE2-201ENST00000341472 PEAK1Q9H792 1746 aa27.8■■■□□ 2.04
SYNE2-201ENST00000341472 LTN1O94822 1766 aa27.78■■■□□ 2.04
SYNE2-201ENST00000341472 PPM1GO15355 546 aaPredicted RBP27.78■■■□□ 2.04
SYNE2-201ENST00000341472 ZCRB1Q8TBF4 217 aaKnown RBP27.78■■■□□ 2.04
SYNE2-201ENST00000341472 INSRP06213 1382 aa27.77■■■□□ 2.04
SYNE2-201ENST00000341472 KIF24Q5T7B8 1368 aa27.77■■■□□ 2.04
SYNE2-201ENST00000341472 EMILIN1Q9Y6C2 1016 aa27.77■■■□□ 2.04
SYNE2-201ENST00000341472 FLT4P35916 1363 aa27.76■■■□□ 2.03
SYNE2-201ENST00000341472 TXNRD1Q16881 649 aa27.76■■■□□ 2.03
SYNE2-201ENST00000341472 USHBP1Q8N6Y0 703 aa27.75■■■□□ 2.03
SYNE2-201ENST00000341472 RAPGEF4Q8WZA2 1011 aa27.75■■■□□ 2.03
SYNE2-201ENST00000341472 SMG6Q86US8 1419 aaKnown RBP27.75■■■□□ 2.03
SYNE2-201ENST00000341472 TATP17735 454 aaPredicted RBP27.72■■■□□ 2.03
SYNE2-201ENST00000341472 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
SYNE2-201ENST00000341472 POLKQ9UBT6 870 aa27.7■■■□□ 2.02
SYNE2-201ENST00000341472 WASHC2AQ641Q2 1341 aa27.69■■■□□ 2.02
SYNE2-201ENST00000341472 WNK3Q9BYP7 1800 aa27.69■■■□□ 2.02
SYNE2-201ENST00000341472 PRIM1P49642 420 aaKnown RBP27.68■■■□□ 2.02
SYNE2-201ENST00000341472 ANO8Q9HCE9 1232 aaPredicted RBP27.68■■■□□ 2.02
SYNE2-201ENST00000341472 STK32BQ9NY57 414 aa27.67■■■□□ 2.02
SYNE2-201ENST00000341472 SYTL4Q96C24 671 aaPredicted RBP27.66■■■□□ 2.02
SYNE2-201ENST00000341472 MYOM1P52179 1685 aa27.65■■■□□ 2.02
SYNE2-201ENST00000341472 MEGF6O75095 1541 aa27.64■■■□□ 2.02
SYNE2-201ENST00000341472 KNSTRNQ9Y448 316 aa27.64■■■□□ 2.02
SYNE2-201ENST00000341472 SBF2Q86WG5 1849 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms