RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KIF1BO60333 1816 aa11.57□□□□□ -0.56
TRERF1-201ENST00000340840 DNTTIP2Q5QJE6 756 aaKnown RBP11.57□□□□□ -0.56
TRERF1-201ENST00000340840 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
TRERF1-201ENST00000340840 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
TRERF1-201ENST00000340840 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
TRERF1-201ENST00000340840 ABCA6Q8N139 1617 aa11.56□□□□□ -0.56
TRERF1-201ENST00000340840 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
TRERF1-201ENST00000340840 IDI1Q13907 227 aa11.56□□□□□ -0.56
TRERF1-201ENST00000340840 SLC4A10Q6U841 1118 aa11.56□□□□□ -0.56
TRERF1-201ENST00000340840 ZCCHC11Q5TAX3 1644 aaKnown RBP11.56□□□□□ -0.56
TRERF1-201ENST00000340840 KLHL40Q2TBA0 621 aa11.56□□□□□ -0.56
TRERF1-201ENST00000340840 ZSCAN30Q86W11 494 aa11.56□□□□□ -0.56
TRERF1-201ENST00000340840 PROSER2Q86WR7 435 aaPredicted RBP11.56□□□□□ -0.56
TRERF1-201ENST00000340840 BAG4O95429 457 aaKnown RBP11.55□□□□□ -0.56
TRERF1-201ENST00000340840 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-201ENST00000340840 STK31Q9BXU1 1019 aa11.55□□□□□ -0.56
TRERF1-201ENST00000340840 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
TRERF1-201ENST00000340840 PLEKHF1Q96S99 279 aa11.54□□□□□ -0.56
TRERF1-201ENST00000340840 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
TRERF1-201ENST00000340840 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-201ENST00000340840 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-201ENST00000340840 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-201ENST00000340840 SLC26A8Q96RN1 970 aa11.54□□□□□ -0.56
TRERF1-201ENST00000340840 EFCAB6Q5THR3 1501 aa11.54□□□□□ -0.56
TRERF1-201ENST00000340840 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-201ENST00000340840 VAMP4O75379 141 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 PRPF40AO75400 957 aaKnown RBP11.53□□□□□ -0.56
TRERF1-201ENST00000340840 PHF14O94880 888 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 NPATQ14207 1427 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 IQSEC2Q5JU85 1478 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
TRERF1-201ENST00000340840 MBD3O95983 291 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
TRERF1-201ENST00000340840 GAS2L2Q8NHY3 880 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 ZFYVE9O95405 1425 aa11.53□□□□□ -0.56
TRERF1-201ENST00000340840 NLRP1Q9C000 1473 aa11.52□□□□□ -0.56
TRERF1-201ENST00000340840 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.56
TRERF1-201ENST00000340840 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.56
TRERF1-201ENST00000340840 ERC2O15083 957 aa11.52□□□□□ -0.57
TRERF1-201ENST00000340840 MCM2P49736 904 aa11.52□□□□□ -0.57
TRERF1-201ENST00000340840 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
TRERF1-201ENST00000340840 SOX12O15370 315 aa11.52□□□□□ -0.57
TRERF1-201ENST00000340840 KIAA2012Q0VF49 1180 aa11.52□□□□□ -0.57
TRERF1-201ENST00000340840 MYOM1P52179 1685 aa11.52□□□□□ -0.57
TRERF1-201ENST00000340840 ATF3P18847 181 aa11.51□□□□□ -0.57
TRERF1-201ENST00000340840 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
TRERF1-201ENST00000340840 SETBP1Q9Y6X0 1596 aa11.51□□□□□ -0.57
TRERF1-201ENST00000340840 UBAP1LF5GYI3 381 aa11.51□□□□□ -0.57
TRERF1-201ENST00000340840 TTC22Q5TAA0 569 aa11.51□□□□□ -0.57
TRERF1-201ENST00000340840 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
TRERF1-201ENST00000340840 NEK4P51957 841 aa11.51□□□□□ -0.57
TRERF1-201ENST00000340840 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
TRERF1-201ENST00000340840 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
TRERF1-201ENST00000340840 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
TRERF1-201ENST00000340840 NEURL4Q96JN8 1562 aa11.5□□□□□ -0.57
TRERF1-201ENST00000340840 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
TRERF1-201ENST00000340840 RILPL2Q969X0 211 aa11.5□□□□□ -0.57
TRERF1-201ENST00000340840 CFAP65Q6ZU64 1925 aaKnown RBP11.5□□□□□ -0.57
TRERF1-201ENST00000340840 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRERF1-201ENST00000340840 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
TRERF1-201ENST00000340840 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
TRERF1-201ENST00000340840 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
TRERF1-201ENST00000340840 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
TRERF1-201ENST00000340840 CCDC39Q9UFE4 941 aa11.49□□□□□ -0.57
TRERF1-201ENST00000340840 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
TRERF1-201ENST00000340840 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
TRERF1-201ENST00000340840 PHACTR3Q96KR7 559 aa11.48□□□□□ -0.57
TRERF1-201ENST00000340840 MAP7D2Q96T17 732 aa11.48□□□□□ -0.57
TRERF1-201ENST00000340840 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
TRERF1-201ENST00000340840 SULT6B1Q6IMI4 303 aa11.48□□□□□ -0.57
TRERF1-201ENST00000340840 ANKRD44Q8N8A2 993 aa11.48□□□□□ -0.57
TRERF1-201ENST00000340840 ADGRB3O60242 1522 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 FBLN1P23142 703 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 GAS2L3Q86XJ1 694 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 C8orf58Q8NAV2 365 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 NRXN1Q9ULB1 1477 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 DCTN1Q14203 1278 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 RRS1Q15050 365 aaKnown RBP11.47□□□□□ -0.57
TRERF1-201ENST00000340840 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-201ENST00000340840 NME9Q86XW9 330 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 PPIP5K1Q6PFW1 1433 aa11.47□□□□□ -0.57
TRERF1-201ENST00000340840 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
TRERF1-201ENST00000340840 ZSCAN23Q3MJ62 389 aa11.46□□□□□ -0.57
TRERF1-201ENST00000340840 WAPLQ7Z5K2 1190 aa11.46□□□□□ -0.57
TRERF1-201ENST00000340840 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
TRERF1-201ENST00000340840 TSPYL4Q9UJ04 414 aa11.46□□□□□ -0.57
TRERF1-201ENST00000340840 SMARCA5O60264 1052 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-201ENST00000340840 CCT4P50991 539 aaKnown RBP11.46□□□□□ -0.57
TRERF1-201ENST00000340840 OS9Q13438 667 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-201ENST00000340840 ABCC4O15439 1325 aa11.46□□□□□ -0.57
TRERF1-201ENST00000340840 SDSP20132 328 aa11.46□□□□□ -0.58
TRERF1-201ENST00000340840 FOXD4L6Q3SYB3 417 aaPredicted RBP11.46□□□□□ -0.58
TRERF1-201ENST00000340840 FOXD4L3Q6VB84 417 aaPredicted RBP11.46□□□□□ -0.58
TRERF1-201ENST00000340840 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.58
TRERF1-201ENST00000340840 DEPDC5O75140 1603 aa11.46□□□□□ -0.58
TRERF1-201ENST00000340840 GNAI2P04899 355 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms