RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
DNMT1-201ENST00000340748 TPD52L1Q16890 204 aaPredicted RBP15.53■□□□□ 0.08
DNMT1-201ENST00000340748 CCDC27Q2M243 656 aa15.53■□□□□ 0.08
DNMT1-201ENST00000340748 TRDNQ13061 729 aa15.53■□□□□ 0.08
DNMT1-201ENST00000340748 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
DNMT1-201ENST00000340748 SMC3Q9UQE7 1217 aa15.53■□□□□ 0.08
DNMT1-201ENST00000340748 BTBD11A6QL63 1104 aa15.52■□□□□ 0.08
DNMT1-201ENST00000340748 RBM5P52756 815 aaKnown RBP eCLIP15.52■□□□□ 0.081e-7■■■■■ 35.1
DNMT1-201ENST00000340748 C16orf71Q8IYS4 520 aaPredicted RBP15.52■□□□□ 0.08
DNMT1-201ENST00000340748 USP21Q9UK80 565 aa15.52■□□□□ 0.08
DNMT1-201ENST00000340748 CPLX1O14810 134 aa15.52■□□□□ 0.08
DNMT1-201ENST00000340748 CREBRFQ8IUR6 639 aa15.52■□□□□ 0.08
DNMT1-201ENST00000340748 RSPH6AQ9H0K4 717 aa15.52■□□□□ 0.08
DNMT1-201ENST00000340748 NME9Q86XW9 330 aa15.52■□□□□ 0.07
DNMT1-201ENST00000340748 EXOSC9Q06265 439 aaKnown RBP15.52■□□□□ 0.07
DNMT1-201ENST00000340748 GCC1Q96CN9 775 aa15.52■□□□□ 0.07
DNMT1-201ENST00000340748 SLAIN2Q9P270 581 aa15.52■□□□□ 0.07
DNMT1-201ENST00000340748 FOXD4L6Q3SYB3 417 aaPredicted RBP15.51■□□□□ 0.07
DNMT1-201ENST00000340748 FOXD4L3Q6VB84 417 aaPredicted RBP15.51■□□□□ 0.07
DNMT1-201ENST00000340748 NEO1Q92859 1461 aa15.51■□□□□ 0.07
DNMT1-201ENST00000340748 GOLGA6L1Q8N7Z2 621 aa15.51■□□□□ 0.07
DNMT1-201ENST00000340748 ACEP12821 1306 aa15.51■□□□□ 0.07
DNMT1-201ENST00000340748 DUOX2Q9NRD8 1548 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 TPM2P07951 284 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 TPM1P09493 284 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 TSR1Q2NL82 804 aaKnown RBP15.5■□□□□ 0.07
DNMT1-201ENST00000340748 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 APPP05067 770 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 RFC4P35249 363 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
DNMT1-201ENST00000340748 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
DNMT1-201ENST00000340748 FYB1O15117 783 aa15.49■□□□□ 0.07
DNMT1-201ENST00000340748 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
DNMT1-201ENST00000340748 CNNM1Q9NRU3 951 aa15.49■□□□□ 0.07
DNMT1-201ENST00000340748 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
DNMT1-201ENST00000340748 BAG6P46379 1132 aa15.49■□□□□ 0.07
DNMT1-201ENST00000340748 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
DNMT1-201ENST00000340748 STK32BQ9NY57 414 aa15.48■□□□□ 0.07
DNMT1-201ENST00000340748 TBX22Q9Y458 520 aa15.48■□□□□ 0.07
DNMT1-201ENST00000340748 TFCP2L1Q9NZI6 479 aa15.48■□□□□ 0.07
DNMT1-201ENST00000340748 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
DNMT1-201ENST00000340748 DHX16O60231 1041 aaKnown RBP15.48■□□□□ 0.07
DNMT1-201ENST00000340748 C14orf93Q9H972 538 aaKnown RBP15.48■□□□□ 0.07
DNMT1-201ENST00000340748 BTG4Q9NY30 223 aa15.48■□□□□ 0.07
DNMT1-201ENST00000340748 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
DNMT1-201ENST00000340748 PSMA5P28066 241 aa15.47■□□□□ 0.07
DNMT1-201ENST00000340748 AMOTQ4VCS5 1084 aa15.47■□□□□ 0.07
DNMT1-201ENST00000340748 CTTNBP2Q8WZ74 1663 aa15.47■□□□□ 0.07
DNMT1-201ENST00000340748 BICD2Q8TD16 824 aa15.47■□□□□ 0.07
DNMT1-201ENST00000340748 ERICH2A1L162 156 aa15.46■□□□□ 0.07
DNMT1-201ENST00000340748 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
DNMT1-201ENST00000340748 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
DNMT1-201ENST00000340748 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
DNMT1-201ENST00000340748 VPS37CA5D8V6 355 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-201ENST00000340748 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-201ENST00000340748 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.073e-7■■□□□ 13.7
DNMT1-201ENST00000340748 CCDC47Q96A33 483 aaKnown RBP15.46■□□□□ 0.07
DNMT1-201ENST00000340748 NFKBIBQ15653 356 aa15.46■□□□□ 0.06
DNMT1-201ENST00000340748 ZNF772Q68DY9 489 aaPredicted RBP15.46■□□□□ 0.06
DNMT1-201ENST00000340748 CLASRPQ8N2M8 674 aaKnown RBP15.46■□□□□ 0.06
DNMT1-201ENST00000340748 MPHOSPH8Q99549 860 aa15.46■□□□□ 0.06
DNMT1-201ENST00000340748 HIP1O00291 1037 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 MCM2P49736 904 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 PES1O00541 588 aaKnown RBP15.45■□□□□ 0.06
DNMT1-201ENST00000340748 ERC1Q8IUD2 1116 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 ARID3AQ99856 593 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 CHD1O14646 1710 aa15.45■□□□□ 0.06
DNMT1-201ENST00000340748 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
DNMT1-201ENST00000340748 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
DNMT1-201ENST00000340748 DISP1Q96F81 1524 aa15.44■□□□□ 0.06
DNMT1-201ENST00000340748 GNAI2P04899 355 aa15.44■□□□□ 0.06
DNMT1-201ENST00000340748 WDHD1O75717 1129 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-201ENST00000340748 GNAT3A8MTJ3 354 aa15.44■□□□□ 0.06
DNMT1-201ENST00000340748 RXRBP28702 533 aa15.44■□□□□ 0.06
DNMT1-201ENST00000340748 CCT4P50991 539 aaKnown RBP15.44■□□□□ 0.06
DNMT1-201ENST00000340748 KDM6BO15054 1643 aa15.44■□□□□ 0.06
DNMT1-201ENST00000340748 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-201ENST00000340748 ANKRD20A12PQ8NF67 263 aa15.44■□□□□ 0.06
DNMT1-201ENST00000340748 RABEP1Q15276 862 aa15.43■□□□□ 0.06
DNMT1-201ENST00000340748 SASS6Q6UVJ0 657 aa15.43■□□□□ 0.06
DNMT1-201ENST00000340748 RALYLQ86SE5 291 aaKnown RBP15.43■□□□□ 0.06
DNMT1-201ENST00000340748 SURF6O75683 361 aaKnown RBP15.43■□□□□ 0.06
DNMT1-201ENST00000340748 BCAR3O75815 825 aa15.43■□□□□ 0.06
DNMT1-201ENST00000340748 CEP89Q96ST8 783 aa15.43■□□□□ 0.06
DNMT1-201ENST00000340748 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
DNMT1-201ENST00000340748 DISP3Q9P2K9 1392 aa15.42■□□□□ 0.06
DNMT1-201ENST00000340748 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
DNMT1-201ENST00000340748 SAFBQ15424 915 aaKnown RBP eCLIP15.42■□□□□ 0.06
DNMT1-201ENST00000340748 CCDC73Q6ZRK6 1079 aa15.42■□□□□ 0.06
DNMT1-201ENST00000340748 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
DNMT1-201ENST00000340748 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
DNMT1-201ENST00000340748 FAM98CQ17RN3 349 aaKnown RBP15.42■□□□□ 0.06
DNMT1-201ENST00000340748 TSR2Q969E8 191 aaKnown RBP15.42■□□□□ 0.06
DNMT1-201ENST00000340748 ABCA5Q8WWZ7 1642 aa15.42■□□□□ 0.06
DNMT1-201ENST00000340748 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
DNMT1-201ENST00000340748 MVPQ14764 893 aaKnown RBP15.41■□□□□ 0.06
DNMT1-201ENST00000340748 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms