RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 FOSBP53539 338 aa22.38■■□□□ 1.17
FGFR3-202ENST00000340107 CNTROBQ8N137 903 aa22.38■■□□□ 1.17
FGFR3-202ENST00000340107 SAMD9Q5K651 1589 aa22.38■■□□□ 1.17
FGFR3-202ENST00000340107 ZNF518AQ6AHZ1 1483 aa22.38■■□□□ 1.17
FGFR3-202ENST00000340107 SMARCA5O60264 1052 aaPredicted RBP22.37■■□□□ 1.17
FGFR3-202ENST00000340107 PHF14O94880 888 aa22.37■■□□□ 1.17
FGFR3-202ENST00000340107 ABCC11Q96J66 1382 aa22.37■■□□□ 1.17
FGFR3-202ENST00000340107 WASHC4Q2M389 1173 aa22.36■■□□□ 1.17
FGFR3-202ENST00000340107 DNAJC2Q99543 621 aaKnown RBP22.36■■□□□ 1.17
FGFR3-202ENST00000340107 NCKAP5LQ9HCH0 1330 aa22.36■■□□□ 1.17
FGFR3-202ENST00000340107 CABP4P57796 275 aa22.36■■□□□ 1.17
FGFR3-202ENST00000340107 RPAP2Q8IXW5 612 aaPredicted RBP22.36■■□□□ 1.17
FGFR3-202ENST00000340107 SHANK2Q9UPX8 1470 aa22.35■■□□□ 1.17
FGFR3-202ENST00000340107 TNNQ9UQP3 1299 aa22.35■■□□□ 1.17
FGFR3-202ENST00000340107 LRRFIP1Q32MZ4 808 aaKnown RBP22.35■■□□□ 1.17
FGFR3-202ENST00000340107 ALDH1L2Q3SY69 923 aa22.35■■□□□ 1.17
FGFR3-202ENST00000340107 TEX14Q8IWB6 1497 aa22.35■■□□□ 1.17
FGFR3-202ENST00000340107 TRAK2O60296 914 aa22.34■■□□□ 1.17
FGFR3-202ENST00000340107 PLEKHH1Q9ULM0 1364 aa22.34■■□□□ 1.17
FGFR3-202ENST00000340107 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
FGFR3-202ENST00000340107 MPRIPQ6WCQ1 1025 aa22.34■■□□□ 1.17
FGFR3-202ENST00000340107 CPLX1O14810 134 aa22.33■■□□□ 1.17
FGFR3-202ENST00000340107 MBIPQ9NS73 344 aa22.33■■□□□ 1.17
FGFR3-202ENST00000340107 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
FGFR3-202ENST00000340107 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
FGFR3-202ENST00000340107 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
FGFR3-202ENST00000340107 G3V3G9 751 aa22.32■■□□□ 1.16
FGFR3-202ENST00000340107 DCAF8Q5TAQ9 597 aa22.32■■□□□ 1.16
FGFR3-202ENST00000340107 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
FGFR3-202ENST00000340107 RABEP1Q15276 862 aa22.32■■□□□ 1.16
FGFR3-202ENST00000340107 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
FGFR3-202ENST00000340107 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
FGFR3-202ENST00000340107 NSD2O96028 1365 aa22.32■■□□□ 1.16
FGFR3-202ENST00000340107 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
FGFR3-202ENST00000340107 KCNH5Q8NCM2 988 aa22.31■■□□□ 1.16
FGFR3-202ENST00000340107 VPS37DQ86XT2 251 aa22.31■■□□□ 1.16
FGFR3-202ENST00000340107 RASSF8Q8NHQ8 419 aa22.31■■□□□ 1.16
FGFR3-202ENST00000340107 POLKQ9UBT6 870 aa22.31■■□□□ 1.16
FGFR3-202ENST00000340107 TAF7Q15545 349 aaPredicted RBP22.3■■□□□ 1.16
FGFR3-202ENST00000340107 CREBRFQ8IUR6 639 aa22.3■■□□□ 1.16
FGFR3-202ENST00000340107 ABCC2Q92887 1545 aa22.3■■□□□ 1.16
FGFR3-202ENST00000340107 SPG7Q9UQ90 795 aa22.3■■□□□ 1.16
FGFR3-202ENST00000340107 TRDNQ13061 729 aa22.3■■□□□ 1.16
FGFR3-202ENST00000340107 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
FGFR3-202ENST00000340107 CCDC27Q2M243 656 aa22.29■■□□□ 1.16
FGFR3-202ENST00000340107 CPLX2Q6PUV4 134 aaKnown RBP22.29■■□□□ 1.16
FGFR3-202ENST00000340107 NUTM1Q86Y26 1132 aa22.29■■□□□ 1.16
FGFR3-202ENST00000340107 ABCC10Q5T3U5 1492 aa22.29■■□□□ 1.16
FGFR3-202ENST00000340107 BICD2Q8TD16 824 aa22.29■■□□□ 1.16
FGFR3-202ENST00000340107 ADGRL2O95490 1459 aa22.28■■□□□ 1.16
FGFR3-202ENST00000340107 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
FGFR3-202ENST00000340107 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
FGFR3-202ENST00000340107 TNRQ92752 1358 aa22.28■■□□□ 1.16
FGFR3-202ENST00000340107 RNF214Q8ND24 703 aa22.27■■□□□ 1.16
FGFR3-202ENST00000340107 ARHGEF12Q9NZN5 1544 aa22.27■■□□□ 1.16
FGFR3-202ENST00000340107 CCDC85AQ96PX6 553 aaPredicted RBP22.27■■□□□ 1.16
FGFR3-202ENST00000340107 SYNE3Q6ZMZ3 975 aa22.26■■□□□ 1.15
FGFR3-202ENST00000340107 PRPF40AO75400 957 aaKnown RBP22.26■■□□□ 1.15
FGFR3-202ENST00000340107 ANXA1P04083 346 aa22.26■■□□□ 1.15
FGFR3-202ENST00000340107 RLBP1P12271 317 aa22.26■■□□□ 1.15
FGFR3-202ENST00000340107 CAVIN1Q6NZI2 390 aaKnown RBP22.26■■□□□ 1.15
FGFR3-202ENST00000340107 TTC21BQ7Z4L5 1316 aa22.25■■□□□ 1.15
FGFR3-202ENST00000340107 AACSQ86V21 672 aa22.25■■□□□ 1.15
FGFR3-202ENST00000340107 PHACTR3Q96KR7 559 aa22.25■■□□□ 1.15
FGFR3-202ENST00000340107 UHRF1BP1Q6BDS2 1440 aa22.24■■□□□ 1.15
FGFR3-202ENST00000340107 BECN2A8MW95 431 aa22.24■■□□□ 1.15
FGFR3-202ENST00000340107 K7ELQ4 463 aaPredicted RBP22.24■■□□□ 1.15
FGFR3-202ENST00000340107 AKAP17AQ02040 695 aaKnown RBP22.24■■□□□ 1.15
FGFR3-202ENST00000340107 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
FGFR3-202ENST00000340107 RALYLQ86SE5 291 aaKnown RBP22.24■■□□□ 1.15
FGFR3-202ENST00000340107 BRPF3Q9ULD4 1205 aa22.24■■□□□ 1.15
FGFR3-202ENST00000340107 ERC1Q8IUD2 1116 aa22.23■■□□□ 1.15
FGFR3-202ENST00000340107 UHRF1BP1LA0JNW5 1464 aa22.23■■□□□ 1.15
FGFR3-202ENST00000340107 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
FGFR3-202ENST00000340107 NUTM2BA6NNL0 878 aaPredicted RBP22.23■■□□□ 1.15
FGFR3-202ENST00000340107 NUTM2EB1AL46 878 aaPredicted RBP22.23■■□□□ 1.15
FGFR3-202ENST00000340107 KDM4AO75164 1064 aa22.23■■□□□ 1.15
FGFR3-202ENST00000340107 FLIIQ13045 1269 aa22.23■■□□□ 1.15
FGFR3-202ENST00000340107 NUTM2AQ8IVF1 878 aaPredicted RBP22.23■■□□□ 1.15
FGFR3-202ENST00000340107 NFXL1Q6ZNB6 911 aa22.23■■□□□ 1.15
FGFR3-202ENST00000340107 CCDC34Q96HJ3 373 aa22.23■■□□□ 1.15
FGFR3-202ENST00000340107 POLR3AO14802 1390 aaPredicted RBP22.22■■□□□ 1.15
FGFR3-202ENST00000340107 C8orf58Q8NAV2 365 aa22.22■■□□□ 1.15
FGFR3-202ENST00000340107 UPF3BQ9BZI7 483 aaKnown RBP22.22■■□□□ 1.15
FGFR3-202ENST00000340107 TPM4P67936 248 aa22.22■■□□□ 1.15
FGFR3-202ENST00000340107 FBXW7Q969H0 707 aa22.22■■□□□ 1.15
FGFR3-202ENST00000340107 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
FGFR3-202ENST00000340107 GOLGA6L19H0YKK7 550 aa22.21■■□□□ 1.15
FGFR3-202ENST00000340107 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
FGFR3-202ENST00000340107 KRT24Q2M2I5 525 aa22.21■■□□□ 1.15
FGFR3-202ENST00000340107 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
FGFR3-202ENST00000340107 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
FGFR3-202ENST00000340107 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.15
FGFR3-202ENST00000340107 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
FGFR3-202ENST00000340107 KDM6BO15054 1643 aa22.2■■□□□ 1.14
FGFR3-202ENST00000340107 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.2■■□□□ 1.14
FGFR3-202ENST00000340107 PPIP5K1Q6PFW1 1433 aa22.19■■□□□ 1.14
FGFR3-202ENST00000340107 FIBPO43427 364 aa22.19■■□□□ 1.14
FGFR3-202ENST00000340107 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
FGFR3-202ENST00000340107 PSMA5P28066 241 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms