RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 ZBED9Q6R2W3 1325 aa10.42□□□□□ -0.74
TMC1-202ENST00000340019 UBAP1LF5GYI3 381 aa10.42□□□□□ -0.74
TMC1-202ENST00000340019 U2AF1L5P0DN76 240 aaPredicted RBP10.42□□□□□ -0.74
TMC1-202ENST00000340019 ADRA2BP18089 450 aa10.42□□□□□ -0.74
TMC1-202ENST00000340019 U2AF1Q01081 240 aaKnown RBP eCLIP10.42□□□□□ -0.74
TMC1-202ENST00000340019 IP6K1Q92551 441 aa10.42□□□□□ -0.74
TMC1-202ENST00000340019 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
TMC1-202ENST00000340019 CABLES1Q8TDN4 633 aa10.41□□□□□ -0.74
TMC1-202ENST00000340019 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
TMC1-202ENST00000340019 CPDO75976 1380 aa10.41□□□□□ -0.74
TMC1-202ENST00000340019 ABCC6O95255 1503 aa10.41□□□□□ -0.74
TMC1-202ENST00000340019 RGPD5Q99666 1765 aa10.4□□□□□ -0.74
TMC1-202ENST00000340019 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
TMC1-202ENST00000340019 CCDC146Q8IYE0 955 aa10.4□□□□□ -0.74
TMC1-202ENST00000340019 PLEKHF1Q96S99 279 aa10.4□□□□□ -0.74
TMC1-202ENST00000340019 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
TMC1-202ENST00000340019 FCHSD2O94868 740 aa10.39□□□□□ -0.75
TMC1-202ENST00000340019 RUNDC1Q96C34 613 aa10.39□□□□□ -0.75
TMC1-202ENST00000340019 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
TMC1-202ENST00000340019 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
TMC1-202ENST00000340019 CENPBP07199 599 aaPredicted RBP10.38□□□□□ -0.75
TMC1-202ENST00000340019 RGPD2P0DJD1 1756 aa10.38□□□□□ -0.75
TMC1-202ENST00000340019 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
TMC1-202ENST00000340019 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
TMC1-202ENST00000340019 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
TMC1-202ENST00000340019 KDRP35968 1356 aa10.38□□□□□ -0.75
TMC1-202ENST00000340019 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
TMC1-202ENST00000340019 SENP3-EIF4A1A0A087X0R7 540 aa10.37□□□□□ -0.75
TMC1-202ENST00000340019 APAF1O14727 1248 aa10.37□□□□□ -0.75
TMC1-202ENST00000340019 CAMTA1Q9Y6Y1 1673 aa10.37□□□□□ -0.75
TMC1-202ENST00000340019 EYA1Q99502 592 aa10.37□□□□□ -0.75
TMC1-202ENST00000340019 PNNQ9H307 717 aaKnown RBP10.37□□□□□ -0.75
TMC1-202ENST00000340019 HMOX1P09601 288 aa10.37□□□□□ -0.75
TMC1-202ENST00000340019 NCAPD2Q15021 1401 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 ZNF521Q96K83 1311 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 ZBTB7CA1YPR0 619 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 NCBP3Q53F19 620 aaKnown RBP10.36□□□□□ -0.75
TMC1-202ENST00000340019 SULT6B1Q6IMI4 303 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 AEBP1Q8IUX7 1158 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 TCP11L2Q8N4U5 519 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
TMC1-202ENST00000340019 FAM208AQ9UK61 1670 aaKnown RBP10.35□□□□□ -0.75
TMC1-202ENST00000340019 ERBB3P21860 1342 aa10.35□□□□□ -0.75
TMC1-202ENST00000340019 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
TMC1-202ENST00000340019 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
TMC1-202ENST00000340019 CHRNA2Q15822 529 aa10.34□□□□□ -0.75
TMC1-202ENST00000340019 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
TMC1-202ENST00000340019 PHACTR3Q96KR7 559 aa10.34□□□□□ -0.75
TMC1-202ENST00000340019 NBPF6Q5VWK0 638 aa10.34□□□□□ -0.75
TMC1-202ENST00000340019 NBPF4Q96M43 638 aa10.34□□□□□ -0.75
TMC1-202ENST00000340019 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
TMC1-202ENST00000340019 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
TMC1-202ENST00000340019 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
TMC1-202ENST00000340019 CCDC27Q2M243 656 aa10.33□□□□□ -0.76
TMC1-202ENST00000340019 PRDM11Q9NQV5 511 aa10.33□□□□□ -0.76
TMC1-202ENST00000340019 COL14A1Q05707 1796 aaKnown RBP10.33□□□□□ -0.76
TMC1-202ENST00000340019 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
TMC1-202ENST00000340019 RRP7AQ9Y3A4 280 aaKnown RBP10.32□□□□□ -0.76
TMC1-202ENST00000340019 COL5A2P05997 1499 aaPredicted RBP10.32□□□□□ -0.76
TMC1-202ENST00000340019 FAM83GA6ND36 823 aa10.32□□□□□ -0.76
TMC1-202ENST00000340019 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
TMC1-202ENST00000340019 WWC1Q8IX03 1113 aa10.32□□□□□ -0.76
TMC1-202ENST00000340019 JCADQ9P266 1359 aa10.31□□□□□ -0.76
TMC1-202ENST00000340019 NEFMP07197 916 aa10.31□□□□□ -0.76
TMC1-202ENST00000340019 USHBP1Q8N6Y0 703 aa10.31□□□□□ -0.76
TMC1-202ENST00000340019 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
TMC1-202ENST00000340019 NEUROD2Q15784 382 aa10.3□□□□□ -0.76
TMC1-202ENST00000340019 NFE2L2Q16236 605 aa10.3□□□□□ -0.76
TMC1-202ENST00000340019 PLCH1Q4KWH8 1693 aa10.3□□□□□ -0.76
TMC1-202ENST00000340019 RIPK4P57078 832 aa10.3□□□□□ -0.76
TMC1-202ENST00000340019 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
TMC1-202ENST00000340019 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
TMC1-202ENST00000340019 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
TMC1-202ENST00000340019 HSPA1LP34931 641 aa10.28□□□□□ -0.76
TMC1-202ENST00000340019 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
TMC1-202ENST00000340019 NRAPQ86VF7 1730 aa10.28□□□□□ -0.76
TMC1-202ENST00000340019 MTHFSDQ2M296 383 aaKnown RBP10.28□□□□□ -0.76
TMC1-202ENST00000340019 TRMT2AQ8IZ69 625 aaKnown RBP10.28□□□□□ -0.76
TMC1-202ENST00000340019 PLEKHG2Q9H7P9 1386 aa10.28□□□□□ -0.76
TMC1-202ENST00000340019 NWD2Q9ULI1 1742 aa10.28□□□□□ -0.76
TMC1-202ENST00000340019 SLFN5Q08AF3 891 aa10.27□□□□□ -0.76
TMC1-202ENST00000340019 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.76
TMC1-202ENST00000340019 CSB-PGBD3P0DP91 1061 aa10.27□□□□□ -0.77
TMC1-202ENST00000340019 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.77
TMC1-202ENST00000340019 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
TMC1-202ENST00000340019 SPATA31A6Q5VVP1 1343 aa10.27□□□□□ -0.77
TMC1-202ENST00000340019 ADAMTS2O95450 1211 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 GAS2L2Q8NHY3 880 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 E9PSI1 815 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 MYT1Q01538 1121 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 CARD10Q9BWT7 1032 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 CRB1P82279 1406 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 MEGF6O75095 1541 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 SLIT2O94813 1529 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 LRP6O75581 1613 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 PKD1L3Q7Z443 1732 aa10.26□□□□□ -0.77
TMC1-202ENST00000340019 IL16Q14005 1332 aa10.25□□□□□ -0.77
TMC1-202ENST00000340019 NUTM2BA6NNL0 878 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms